RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 KIF28PB7ZC32 967 aa13.74□□□□□ -0.21
MED28-203ENST00000503945 H3BRB1 525 aa13.74□□□□□ -0.21
MED28-203ENST00000503945 HAS3O00219 553 aa13.74□□□□□ -0.21
MED28-203ENST00000503945 FIBPO43427 364 aa13.74□□□□□ -0.21
MED28-203ENST00000503945 CA3P07451 260 aa13.74□□□□□ -0.21
MED28-203ENST00000503945 ZNF286BP0CG31 522 aa13.74□□□□□ -0.21
MED28-203ENST00000503945 HOXD8P13378 290 aaPredicted RBP13.74□□□□□ -0.21
MED28-203ENST00000503945 SELPP16109 830 aa13.74□□□□□ -0.21
MED28-203ENST00000503945 UBA1P22314 1058 aaKnown RBP13.74□□□□□ -0.21
MED28-203ENST00000503945 CYFIP1Q7L576 1253 aa13.74□□□□□ -0.21
MED28-203ENST00000503945 MICU3Q86XE3 530 aa13.74□□□□□ -0.21
MED28-203ENST00000503945 RASEFQ8IZ41 740 aa13.74□□□□□ -0.21
MED28-203ENST00000503945 IL27Q8NEV9 243 aa13.74□□□□□ -0.21
MED28-203ENST00000503945 PHOSPHO2Q8TCD6 241 aa13.74□□□□□ -0.21
MED28-203ENST00000503945 GPKOWQ92917 476 aaPredicted RBP eCLIP13.74□□□□□ -0.211e-8■■□□□ 12.3
MED28-203ENST00000503945 INPP4AQ96PE3 977 aaPredicted RBP13.74□□□□□ -0.21
MED28-203ENST00000503945 SENP7Q9BQF6 1050 aa13.74□□□□□ -0.21
MED28-203ENST00000503945 TUT1Q9H6E5 874 aaKnown RBP13.74□□□□□ -0.21
MED28-203ENST00000503945 MTCH2Q9Y6C9 303 aa13.74□□□□□ -0.21
MED28-203ENST00000503945 V9GY48 417 aaPredicted RBP13.74□□□□□ -0.21
MED28-203ENST00000503945 MYH7BA7E2Y1 1941 aa13.74□□□□□ -0.21
MED28-203ENST00000503945 PTPRSQ13332 1948 aa13.73□□□□□ -0.21
MED28-203ENST00000503945 hCG_1642624A0A1W2PR95 340 aa13.73□□□□□ -0.21
MED28-203ENST00000503945 SPDYE3A6NKU9 549 aa13.73□□□□□ -0.21
MED28-203ENST00000503945 MAFGO15525 162 aa13.73□□□□□ -0.21
MED28-203ENST00000503945 ZBTB43O43298 467 aa13.73□□□□□ -0.21
MED28-203ENST00000503945 ARHGEF15O94989 841 aa13.73□□□□□ -0.21
MED28-203ENST00000503945 F2P00734 622 aa13.73□□□□□ -0.21
MED28-203ENST00000503945 POU3F3P20264 500 aaPredicted RBP13.73□□□□□ -0.21
MED28-203ENST00000503945 PTK7Q13308 1070 aa13.73□□□□□ -0.21
MED28-203ENST00000503945 COL9A3Q14050 684 aaPredicted RBP13.73□□□□□ -0.21
MED28-203ENST00000503945 KRT40Q6A162 431 aa13.73□□□□□ -0.21
MED28-203ENST00000503945 METTL7BQ6UX53 244 aa13.73□□□□□ -0.21
MED28-203ENST00000503945 TMTC3Q6ZXV5 915 aa13.73□□□□□ -0.21
MED28-203ENST00000503945 HEATR3Q7Z4Q2 680 aa13.73□□□□□ -0.21
MED28-203ENST00000503945 CDHR1Q96JP9 859 aa13.73□□□□□ -0.21
MED28-203ENST00000503945 C16orf70Q9BSU1 422 aa13.73□□□□□ -0.21
MED28-203ENST00000503945 BCAS3Q9H6U6 928 aa13.73□□□□□ -0.21
MED28-203ENST00000503945 TRANK1O15050 2925 aa13.73□□□□□ -0.21
MED28-203ENST00000503945 GNAT1P11488 350 aa13.72□□□□□ -0.21
MED28-203ENST00000503945 CKBP12277 381 aa13.72□□□□□ -0.21
MED28-203ENST00000503945 KCNA4P22459 653 aa13.72□□□□□ -0.21
MED28-203ENST00000503945 KCNQ1P51787 676 aa13.72□□□□□ -0.21
MED28-203ENST00000503945 TAP1Q03518 808 aa13.72□□□□□ -0.21
MED28-203ENST00000503945 SKIV2LQ15477 1246 aaKnown RBP13.72□□□□□ -0.21
MED28-203ENST00000503945 RTN1Q16799 776 aa13.72□□□□□ -0.21
MED28-203ENST00000503945 ADCK5Q3MIX3 580 aa13.72□□□□□ -0.21
MED28-203ENST00000503945 APOA5Q6Q788 366 aa13.72□□□□□ -0.21
MED28-203ENST00000503945 LRRC8DQ7L1W4 858 aa13.72□□□□□ -0.21
MED28-203ENST00000503945 SLC9A7Q96T83 725 aa13.72□□□□□ -0.21
MED28-203ENST00000503945 EHMT1Q9H9B1 1298 aa13.72□□□□□ -0.21
MED28-203ENST00000503945 BRPF3Q9ULD4 1205 aa13.72□□□□□ -0.21
MED28-203ENST00000503945 NAP1L2Q9ULW6 460 aaPredicted RBP13.72□□□□□ -0.21
MED28-203ENST00000503945 PCDHA6Q9UN73 950 aa13.72□□□□□ -0.21
MED28-203ENST00000503945 PCDHA8Q9Y5H6 950 aa13.72□□□□□ -0.21
MED28-203ENST00000503945 KIAA1217Q5T5P2 1943 aa13.72□□□□□ -0.21
MED28-203ENST00000503945 BDP1A6H8Y1 2624 aa13.72□□□□□ -0.21
MED28-203ENST00000503945 FRMPD4Q14CM0 1322 aa13.71□□□□□ -0.21
MED28-203ENST00000503945 MYH6P13533 1939 aa13.71□□□□□ -0.21
MED28-203ENST00000503945 CCDC196A0A1B0GTZ2 297 aa13.71□□□□□ -0.21
MED28-203ENST00000503945 C17orf102A2RUQ5 167 aa13.71□□□□□ -0.21
MED28-203ENST00000503945 BAIAP3O94812 1187 aa13.71□□□□□ -0.21
MED28-203ENST00000503945 ZNF200P98182 395 aaPredicted RBP13.71□□□□□ -0.21
MED28-203ENST00000503945 GPNMBQ14956 572 aa13.71□□□□□ -0.21
MED28-203ENST00000503945 HERC6Q8IVU3 1022 aa13.71□□□□□ -0.21
MED28-203ENST00000503945 TEX2Q8IWB9 1127 aa13.71□□□□□ -0.21
MED28-203ENST00000503945 ARNTL2Q8WYA1 636 aa13.71□□□□□ -0.21
MED28-203ENST00000503945 ATP6V0A1Q93050 837 aa13.71□□□□□ -0.21
MED28-203ENST00000503945 TCEANC2Q96MN5 208 aa13.71□□□□□ -0.21
MED28-203ENST00000503945 CTAGE1Q96RT6 745 aa13.71□□□□□ -0.21
MED28-203ENST00000503945 GPR20Q99678 358 aa13.71□□□□□ -0.21
MED28-203ENST00000503945 RNPEPQ9H4A4 650 aa13.71□□□□□ -0.21
MED28-203ENST00000503945 TANC1Q9C0D5 1861 aa13.7□□□□□ -0.22
MED28-203ENST00000503945 KLF18A0A0U1RQI7 1052 aa13.7□□□□□ -0.22
MED28-203ENST00000503945 GTPBP6O43824 516 aaPredicted RBP13.7□□□□□ -0.22
MED28-203ENST00000503945 REC8O95072 547 aa13.7□□□□□ -0.22
MED28-203ENST00000503945 FOSP01100 380 aaPredicted RBP13.7□□□□□ -0.22
MED28-203ENST00000503945 LGALS2P05162 132 aa13.7□□□□□ -0.22
MED28-203ENST00000503945 NEFLP07196 543 aa13.7□□□□□ -0.22
MED28-203ENST00000503945 PSMA5P28066 241 aa13.7□□□□□ -0.22
MED28-203ENST00000503945 THPOP40225 353 aa13.7□□□□□ -0.22
MED28-203ENST00000503945 KCNJ6P48051 423 aa13.7□□□□□ -0.22
MED28-203ENST00000503945 NAPAP54920 295 aa13.7□□□□□ -0.22
MED28-203ENST00000503945 IKBKEQ14164 716 aa13.7□□□□□ -0.22
MED28-203ENST00000503945 AAK1Q2M2I8 961 aa13.7□□□□□ -0.22
MED28-203ENST00000503945 UTP14CQ5TAP6 766 aaKnown RBP13.7□□□□□ -0.22
MED28-203ENST00000503945 SPRED2Q7Z698 418 aa13.7□□□□□ -0.22
MED28-203ENST00000503945 SEPT1Q8WYJ6 367 aa13.7□□□□□ -0.22
MED28-203ENST00000503945 GPRASP2Q96D09 838 aa13.7□□□□□ -0.22
MED28-203ENST00000503945 ZBED2Q9BTP6 218 aa13.7□□□□□ -0.22
MED28-203ENST00000503945 GLT8D2Q9H1C3 349 aa13.7□□□□□ -0.22
MED28-203ENST00000503945 ZNF215Q9UL58 517 aaPredicted RBP13.7□□□□□ -0.22
MED28-203ENST00000503945 BAZ2BQ9UIF8 2168 aaKnown RBP13.69□□□□□ -0.22
MED28-203ENST00000503945 ABHD14A-ACY1A0A1B0GW23 586 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 SMCO2A6NFE2 343 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 GOLGA8AA7E2F4 631 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 GOLGA8BA8MQT2 603 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 RSPH10B2B2RC85 870 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 ATP9AO75110 1047 aa13.69□□□□□ -0.22
MED28-203ENST00000503945 RSPH10BP0C881 870 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms