RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 IL31RAQ8NI17 732 aa12.4□□□□□ -0.42
SNCA-207ENST00000502987 CTCFLQ8NI51 663 aaPredicted RBP12.4□□□□□ -0.42
SNCA-207ENST00000502987 ATXN2LQ8WWM7 1075 aaKnown RBP12.4□□□□□ -0.42
SNCA-207ENST00000502987 ARNTL2Q8WYA1 636 aa12.4□□□□□ -0.42
SNCA-207ENST00000502987 CUL5Q93034 780 aa12.4□□□□□ -0.42
SNCA-207ENST00000502987 EMID1Q96A84 441 aaPredicted RBP12.4□□□□□ -0.42
SNCA-207ENST00000502987 ZSWIM6Q9HCJ5 1215 aa12.4□□□□□ -0.42
SNCA-207ENST00000502987 TAF6LQ9Y6J9 622 aa12.4□□□□□ -0.42
SNCA-207ENST00000502987 CCDC69A6NI79 296 aa12.39□□□□□ -0.43
SNCA-207ENST00000502987 NOP56O00567 594 aaKnown RBP12.39□□□□□ -0.43
SNCA-207ENST00000502987 BAIAP3O94812 1187 aa12.39□□□□□ -0.43
SNCA-207ENST00000502987 PARNO95453 639 aaKnown RBP12.39□□□□□ -0.43
SNCA-207ENST00000502987 TGFB3P10600 412 aa12.39□□□□□ -0.43
SNCA-207ENST00000502987 CKBP12277 381 aa12.39□□□□□ -0.43
SNCA-207ENST00000502987 KIF5BP33176 963 aa12.39□□□□□ -0.43
SNCA-207ENST00000502987 MRPS5P82675 430 aaKnown RBP12.39□□□□□ -0.43
SNCA-207ENST00000502987 ZNF200P98182 395 aaPredicted RBP12.39□□□□□ -0.43
SNCA-207ENST00000502987 TROAPQ12815 778 aa12.39□□□□□ -0.43
SNCA-207ENST00000502987 PTK7Q13308 1070 aa12.39□□□□□ -0.43
SNCA-207ENST00000502987 HSDL1Q3SXM5 330 aa12.39□□□□□ -0.43
SNCA-207ENST00000502987 GNPTABQ3T906 1256 aa12.39□□□□□ -0.43
SNCA-207ENST00000502987 SMARCC2Q8TAQ2 1214 aa12.39□□□□□ -0.43
SNCA-207ENST00000502987 MAP4K1Q92918 833 aa12.39□□□□□ -0.43
SNCA-207ENST00000502987 RRP36Q96EU6 259 aaKnown RBP12.39□□□□□ -0.43
SNCA-207ENST00000502987 RTEL1Q9NZ71 1219 aa12.39□□□□□ -0.43
SNCA-207ENST00000502987 SEC63Q9UGP8 760 aaKnown RBP12.39□□□□□ -0.43
SNCA-207ENST00000502987 RBM8AQ9Y5S9 174 aaKnown RBP12.39□□□□□ -0.43
SNCA-207ENST00000502987 DOCK5Q9H7D0 1870 aa12.39□□□□□ -0.43
SNCA-207ENST00000502987 KAT6AQ92794 2004 aa12.38□□□□□ -0.43
SNCA-207ENST00000502987 CYTH3O43739 400 aa12.38□□□□□ -0.43
SNCA-207ENST00000502987 RGS20O76081 388 aa12.38□□□□□ -0.43
SNCA-207ENST00000502987 F2P00734 622 aa12.38□□□□□ -0.43
SNCA-207ENST00000502987 SP2Q02086 613 aa12.38□□□□□ -0.43
SNCA-207ENST00000502987 GHRHRQ02643 423 aa12.38□□□□□ -0.43
SNCA-207ENST00000502987 IKBKEQ14164 716 aa12.38□□□□□ -0.43
SNCA-207ENST00000502987 SLC35G1Q2M3R5 365 aa12.38□□□□□ -0.43
SNCA-207ENST00000502987 CNKSR3Q6P9H4 555 aa12.38□□□□□ -0.43
SNCA-207ENST00000502987 ZNF654Q8IZM8 581 aa12.38□□□□□ -0.43
SNCA-207ENST00000502987 IGDCC4Q8TDY8 1250 aa12.38□□□□□ -0.43
SNCA-207ENST00000502987 DHX38Q92620 1227 aaKnown RBP12.38□□□□□ -0.43
SNCA-207ENST00000502987 GPKOWQ92917 476 aaPredicted RBP eCLIP12.38□□□□□ -0.43
SNCA-207ENST00000502987 ASB2Q96Q27 587 aa12.38□□□□□ -0.43
SNCA-207ENST00000502987 MYL10Q9BUA6 226 aa12.38□□□□□ -0.43
SNCA-207ENST00000502987 TCF20Q9UGU0 1960 aaKnown RBP12.38□□□□□ -0.43
SNCA-207ENST00000502987 C17orf102A2RUQ5 167 aa12.37□□□□□ -0.43
SNCA-207ENST00000502987 H3BRB1 525 aa12.37□□□□□ -0.43
SNCA-207ENST00000502987 HAS3O00219 553 aa12.37□□□□□ -0.43
SNCA-207ENST00000502987 PRC1O43663 620 aa12.37□□□□□ -0.43
SNCA-207ENST00000502987 UBA1P22314 1058 aaKnown RBP12.37□□□□□ -0.43
SNCA-207ENST00000502987 MCM5P33992 734 aa12.37□□□□□ -0.43
SNCA-207ENST00000502987 THPOP40225 353 aa12.37□□□□□ -0.43
SNCA-207ENST00000502987 ANTXR2P58335 489 aa12.37□□□□□ -0.43
SNCA-207ENST00000502987 WDR5P61964 334 aaKnown RBP12.37□□□□□ -0.43
SNCA-207ENST00000502987 TAP1Q03518 808 aa12.37□□□□□ -0.43
SNCA-207ENST00000502987 ZNF618Q5T7W0 954 aa12.37□□□□□ -0.43
SNCA-207ENST00000502987 FAM117BQ6P1L5 589 aa12.37□□□□□ -0.43
SNCA-207ENST00000502987 CYFIP1Q7L576 1253 aa12.37□□□□□ -0.43
SNCA-207ENST00000502987 TMCO2Q7Z6W1 182 aaPredicted RBP12.37□□□□□ -0.43
SNCA-207ENST00000502987 MB21D2Q8IYB1 491 aaPredicted RBP12.37□□□□□ -0.43
SNCA-207ENST00000502987 TMTC2Q8N394 836 aa12.37□□□□□ -0.43
SNCA-207ENST00000502987 ATP6V0A1Q93050 837 aa12.37□□□□□ -0.43
SNCA-207ENST00000502987 CTAGE1Q96RT6 745 aa12.37□□□□□ -0.43
SNCA-207ENST00000502987 TUT1Q9H6E5 874 aaKnown RBP12.37□□□□□ -0.43
SNCA-207ENST00000502987 STK24Q9Y6E0 443 aa12.37□□□□□ -0.43
SNCA-207ENST00000502987 SPTBN5Q9NRC6 3674 aaKnown RBP12.36□□□□□ -0.43
SNCA-207ENST00000502987 ABHD14A-ACY1A0A1B0GW23 586 aa12.36□□□□□ -0.43
SNCA-207ENST00000502987 TNFRSF10AO00220 468 aa12.36□□□□□ -0.43
SNCA-207ENST00000502987 NBNO60934 754 aa12.36□□□□□ -0.43
SNCA-207ENST00000502987 STAM2O75886 525 aa12.36□□□□□ -0.43
SNCA-207ENST00000502987 DDAH1O94760 285 aa12.36□□□□□ -0.43
SNCA-207ENST00000502987 GNAQP50148 359 aa12.36□□□□□ -0.43
SNCA-207ENST00000502987 SP4Q02446 784 aa12.36□□□□□ -0.43
SNCA-207ENST00000502987 NEDD9Q14511 834 aa12.36□□□□□ -0.43
SNCA-207ENST00000502987 UTP14CQ5TAP6 766 aaKnown RBP12.36□□□□□ -0.43
SNCA-207ENST00000502987 USP17L6PQ6QN14 398 aa12.36□□□□□ -0.43
SNCA-207ENST00000502987 CCDC82Q8N4S0 544 aa12.36□□□□□ -0.43
SNCA-207ENST00000502987 FBXO22Q8NEZ5 403 aa12.36□□□□□ -0.43
SNCA-207ENST00000502987 LZTS2Q9BRK4 669 aa12.36□□□□□ -0.43
SNCA-207ENST00000502987 BCAS3Q9H6U6 928 aa12.36□□□□□ -0.43
SNCA-207ENST00000502987 LY9Q9HBG7 655 aa12.36□□□□□ -0.43
SNCA-207ENST00000502987 PTPRSQ13332 1948 aa12.36□□□□□ -0.43
SNCA-207ENST00000502987 RSPH10B2B2RC85 870 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 FIBPO43427 364 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 EFCAB14O75071 495 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 LGALS2P05162 132 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 RSPH10BP0C881 870 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 SMIM10L2AP0DMW4 78 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 SMIM10L2BP0DMW5 78 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 GNAT1P11488 350 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 RXRAP19793 462 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 DEFB103AP81534 67 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 MRPS9P82933 396 aaKnown RBP12.35□□□□□ -0.43
SNCA-207ENST00000502987 GPNMBQ14956 572 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 AAK1Q2M2I8 961 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 ARSIQ5FYB1 569 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 SYNE3Q6ZMZ3 975 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 NLRX1Q86UT6 975 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 RAB11FIP4Q86YS3 637 aa12.35□□□□□ -0.43
SNCA-207ENST00000502987 CMTR1Q8N1G2 835 aaKnown RBP12.35□□□□□ -0.43
SNCA-207ENST00000502987 ADAMTS19Q8TE59 1207 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms