RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 LZTS2Q9BRK4 669 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 ZBED2Q9BTP6 218 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 SPZ1Q9BXG8 430 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 SQORQ9Y6N5 450 aa7.07□□□□□ -1.28
LSM3P4-201ENST00000502948 TTC3P53804 2025 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 BAZ2BQ9UIF8 2168 aaKnown RBP7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 NRCAMQ92823 1304 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 LCHNA4D1U4 455 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 C5orf67F2Z3F1 127 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 PI4K2BG5E9Z4 385 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 H3BNC9 293 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 RFXAPO00287 272 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 DDAH1O94760 285 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 LGALS2P05162 132 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 RB1P06400 928 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 ZNF286BP0CG31 522 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 DEFB103AP81534 67 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 MRPS9P82933 396 aaKnown RBP7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 HIC1Q14526 733 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 PTPROQ16827 1216 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 TIGD5Q53EQ6 642 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 TTC22Q5TAA0 569 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 PCNX4Q63HM2 1172 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 B4GALNT3Q6L9W6 998 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 TAF2Q6P1X5 1199 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 CYB5R4Q7L1T6 521 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 CHST3Q7LGC8 479 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 TMTC2Q8N394 836 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 DBF4BQ8NFT6 615 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 NEK9Q8TD19 979 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 IGDCC4Q8TDY8 1250 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 SEPT8Q92599 483 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 MAP4K1Q92918 833 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 ATP6V0A1Q93050 837 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 GPRASP2Q96D09 838 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 MRPL38Q96DV4 380 aaKnown RBP7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 PIGSQ96S52 555 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 GPR20Q99678 358 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 LMAN2LQ9H0V9 348 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 RNPEPQ9H4A4 650 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 MLXIPQ9HAP2 919 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 VAT1LQ9HCJ6 419 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 PRKAG3Q9UGI9 489 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 ZNF215Q9UL58 517 aaPredicted RBP7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 RWDD3Q9Y3V2 267 aa7.06□□□□□ -1.28
LSM3P4-201ENST00000502948 ATG2AQ2TAZ0 1938 aa7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 BRWD1Q9NSI6 2320 aa7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 MBLAC1A4D2B0 266 aaPredicted RBP7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 E7EWF7 191 aa7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 NOP56O00567 594 aaKnown RBP7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 IFIT3O14879 490 aaKnown RBP7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 SGSM2O43147 1006 aa7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 SMIM10L2AP0DMW4 78 aa7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 SMIM10L2BP0DMW5 78 aa7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 MYCLP12524 364 aaPredicted RBP7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 HOXA13P31271 388 aaPredicted RBP7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 KIF5BP33176 963 aa7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 THPOP40225 353 aa7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 LIFRP42702 1097 aa7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 GNAQP50148 359 aa7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 WTAPQ15007 396 aa7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 SKIV2LQ15477 1246 aaKnown RBP7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 SLC35G1Q2M3R5 365 aa7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 TCTN1Q2MV58 587 aa7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 CATIPQ7Z7H3 387 aa7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 RALYLQ86SE5 291 aaKnown RBP7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 IL31RAQ8NI17 732 aa7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 TNPO1Q92973 898 aaKnown RBP7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 WNT8BQ93098 351 aa7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 ALG1Q9BT22 464 aa7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 KCNH6Q9H252 994 aa7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 IL25Q9H293 177 aa7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 UBE2ZQ9H832 354 aaPredicted RBP7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 EHMT1Q9H9B1 1298 aa7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 CERS4Q9HA82 394 aa7.05□□□□□ -1.28
LSM3P4-201ENST00000502948 LOXHD1Q8IVV2 1947 aa7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 GRXCR2A6NFK2 248 aa7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 MEIS2O14770 477 aa7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 TREHO43280 583 aa7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 CALM1P0DP23 149 aa7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 CALM2P0DP24 149 aa7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 CALM3P0DP25 149 aa7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 GSPT1P15170 499 aaKnown RBP7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 CHMLP26374 656 aa7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 HOXD11P31277 338 aaPredicted RBP7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 SEMA3FQ13275 785 aa7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 EPC2Q52LR7 807 aa7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 NAALADL2Q58DX5 795 aa7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 TMEM31Q5JXX7 168 aa7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 NLRX1Q86UT6 975 aa7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 FAM178BQ8IXR5 827 aa7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 MB21D2Q8IYB1 491 aaPredicted RBP7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 CRIPAKQ8N1N5 446 aa7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 MICALL1Q8N3F8 863 aa7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 FBXO22Q8NEZ5 403 aa7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 CLP1Q92989 425 aaKnown RBP7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 CUL5Q93034 780 aa7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 PABPC5Q96DU9 382 aaKnown RBP7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 FAM122AQ96E09 287 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms