RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 HOXD8P13378 290 aaPredicted RBP20.25■□□□□ 0.83
CCHCR1-216ENST00000502557 ATN1P54259 1190 aaPredicted RBP20.25■□□□□ 0.83
CCHCR1-216ENST00000502557 PURAQ00577 322 aaKnown RBP20.25■□□□□ 0.83
CCHCR1-216ENST00000502557 MLLT1Q03111 559 aaPredicted RBP20.25■□□□□ 0.83
CCHCR1-216ENST00000502557 ITGB3BPQ13352 177 aaPredicted RBP20.25■□□□□ 0.83
CCHCR1-216ENST00000502557 LRRC26Q2I0M4 334 aa20.25■□□□□ 0.83
CCHCR1-216ENST00000502557 LETM2Q2VYF4 491 aa20.25■□□□□ 0.83
CCHCR1-216ENST00000502557 MOXD1Q6UVY6 613 aa20.25■□□□□ 0.83
CCHCR1-216ENST00000502557 SLC39A5Q6ZMH5 540 aa20.25■□□□□ 0.83
CCHCR1-216ENST00000502557 GLT1D1Q96MS3 346 aa20.25■□□□□ 0.83
CCHCR1-216ENST00000502557 HTATIP2Q9BUP3 242 aa20.25■□□□□ 0.83
CCHCR1-216ENST00000502557 FOXP1Q9H334 677 aaPredicted RBP20.25■□□□□ 0.83
CCHCR1-216ENST00000502557 STARD7Q9NQZ5 370 aa20.25■□□□□ 0.83
CCHCR1-216ENST00000502557 FRMPD3Q5JV73 1810 aa20.25■□□□□ 0.83
CCHCR1-216ENST00000502557 KIF28PB7ZC32 967 aa20.24■□□□□ 0.83
CCHCR1-216ENST00000502557 DGKDQ16760 1214 aa20.24■□□□□ 0.83
CCHCR1-216ENST00000502557 Q4G0T1 1027 aa20.24■□□□□ 0.83
CCHCR1-216ENST00000502557 UIMC1Q96RL1 719 aa20.24■□□□□ 0.83
CCHCR1-216ENST00000502557 GPR20Q99678 358 aa20.24■□□□□ 0.83
CCHCR1-216ENST00000502557 MTG1Q9BT17 334 aaPredicted RBP20.24■□□□□ 0.83
CCHCR1-216ENST00000502557 FOXD4L1Q9NU39 408 aa20.24■□□□□ 0.83
CCHCR1-216ENST00000502557 NFASCO94856 1347 aa20.24■□□□□ 0.83
CCHCR1-216ENST00000502557 ELP1O95163 1332 aa20.24■□□□□ 0.83
CCHCR1-216ENST00000502557 IPO5O00410 1097 aaKnown RBP20.23■□□□□ 0.83
CCHCR1-216ENST00000502557 NOP56O00567 594 aaKnown RBP20.23■□□□□ 0.83
CCHCR1-216ENST00000502557 DHX15O43143 795 aaKnown RBP20.23■□□□□ 0.83
CCHCR1-216ENST00000502557 PPFIA4O75335 1185 aa20.23■□□□□ 0.83
CCHCR1-216ENST00000502557 PSMC6P62333 389 aa20.23■□□□□ 0.83
CCHCR1-216ENST00000502557 SP4Q02446 784 aa20.23■□□□□ 0.83
CCHCR1-216ENST00000502557 SNX17Q15036 470 aa20.23■□□□□ 0.83
CCHCR1-216ENST00000502557 LARP1BQ659C4 914 aaKnown RBP20.23■□□□□ 0.83
CCHCR1-216ENST00000502557 VTI1AQ96AJ9 217 aa20.23■□□□□ 0.83
CCHCR1-216ENST00000502557 SDF4Q9BRK5 362 aa20.23■□□□□ 0.83
CCHCR1-216ENST00000502557 ZNF577Q9BSK1 485 aa20.23■□□□□ 0.83
CCHCR1-216ENST00000502557 BRCA2P51587 3418 aa20.23■□□□□ 0.83
CCHCR1-216ENST00000502557 A0A0U1RQG5 324 aaPredicted RBP20.22■□□□□ 0.83
CCHCR1-216ENST00000502557 MSH4O15457 936 aa20.22■□□□□ 0.83
CCHCR1-216ENST00000502557 SLC37A4O43826 429 aa20.22■□□□□ 0.83
CCHCR1-216ENST00000502557 GCFC2P16383 781 aaKnown RBP20.22■□□□□ 0.83
CCHCR1-216ENST00000502557 U2AF2P26368 475 aaKnown RBP eCLIP20.22■□□□□ 0.83
CCHCR1-216ENST00000502557 GNL2Q13823 731 aaKnown RBP20.22■□□□□ 0.83
CCHCR1-216ENST00000502557 C1orf53Q5VUE5 145 aa20.22■□□□□ 0.83
CCHCR1-216ENST00000502557 PPP4R3AQ6IN85 833 aa20.22■□□□□ 0.83
CCHCR1-216ENST00000502557 NOSTRINQ8IVI9 506 aa20.22■□□□□ 0.83
CCHCR1-216ENST00000502557 KAT2BQ92831 832 aa20.22■□□□□ 0.83
CCHCR1-216ENST00000502557 JPH1Q9HDC5 661 aaPredicted RBP20.22■□□□□ 0.83
CCHCR1-216ENST00000502557 SLC9A2Q9UBY0 812 aa20.22■□□□□ 0.83
CCHCR1-216ENST00000502557 DDX25Q9UHL0 483 aaKnown RBP20.22■□□□□ 0.83
CCHCR1-216ENST00000502557 GRIN2DO15399 1336 aa20.22■□□□□ 0.83
CCHCR1-216ENST00000502557 H3BQV1 296 aa20.21■□□□□ 0.83
CCHCR1-216ENST00000502557 WNT7AO00755 349 aa20.21■□□□□ 0.83
CCHCR1-216ENST00000502557 CCNT1O60563 726 aaKnown RBP20.21■□□□□ 0.83
CCHCR1-216ENST00000502557 ZNF286BP0CG31 522 aa20.21■□□□□ 0.83
CCHCR1-216ENST00000502557 RTP1P59025 263 aa20.21■□□□□ 0.83
CCHCR1-216ENST00000502557 NAP1L4Q99733 375 aaKnown RBP20.21■□□□□ 0.83
CCHCR1-216ENST00000502557 TBC1D22BQ9NU19 505 aa20.21■□□□□ 0.83
CCHCR1-216ENST00000502557 GSTTP1A0A1W2PQM5 241 aa20.2■□□□□ 0.82
CCHCR1-216ENST00000502557 DDX39AO00148 427 aaKnown RBP20.2■□□□□ 0.82
CCHCR1-216ENST00000502557 ARVCFO00192 962 aa20.2■□□□□ 0.82
CCHCR1-216ENST00000502557 CCNE2O96020 404 aa20.2■□□□□ 0.82
CCHCR1-216ENST00000502557 LGALS2P05162 132 aa20.2■□□□□ 0.82
CCHCR1-216ENST00000502557 CDK7P50613 346 aa20.2■□□□□ 0.82
CCHCR1-216ENST00000502557 ITGA7Q13683 1181 aa20.2■□□□□ 0.82
CCHCR1-216ENST00000502557 TRIM60Q495X7 471 aa20.2■□□□□ 0.82
CCHCR1-216ENST00000502557 SLC43A3Q8NBI5 491 aa20.2■□□□□ 0.82
CCHCR1-216ENST00000502557 ETNPPLQ8TBG4 499 aa20.2■□□□□ 0.82
CCHCR1-216ENST00000502557 SEPT1Q8WYJ6 367 aa20.2■□□□□ 0.82
CCHCR1-216ENST00000502557 DPF3Q92784 378 aa20.2■□□□□ 0.82
CCHCR1-216ENST00000502557 SLC5A5Q92911 643 aa20.2■□□□□ 0.82
CCHCR1-216ENST00000502557 GJA10Q969M2 543 aa20.2■□□□□ 0.82
CCHCR1-216ENST00000502557 C16orf70Q9BSU1 422 aa20.2■□□□□ 0.82
CCHCR1-216ENST00000502557 F2P00734 622 aa20.19■□□□□ 0.82
CCHCR1-216ENST00000502557 TCF7P36402 384 aaPredicted RBP20.19■□□□□ 0.82
CCHCR1-216ENST00000502557 ACTR2P61160 394 aa20.19■□□□□ 0.82
CCHCR1-216ENST00000502557 NBPF20Q3BBV1 942 aa20.19■□□□□ 0.82
CCHCR1-216ENST00000502557 UTP14CQ5TAP6 766 aaKnown RBP20.19■□□□□ 0.82
CCHCR1-216ENST00000502557 MCTP1Q6DN14 999 aa20.19■□□□□ 0.82
CCHCR1-216ENST00000502557 RIT2Q99578 217 aa20.19■□□□□ 0.82
CCHCR1-216ENST00000502557 KCNMB3Q9NPA1 279 aa20.19■□□□□ 0.82
CCHCR1-216ENST00000502557 ATP11BQ9Y2G3 1177 aa20.19■□□□□ 0.82
CCHCR1-216ENST00000502557 ATP2B1P20020 1258 aa20.18■□□□□ 0.82
CCHCR1-216ENST00000502557 PDCP20941 246 aa20.18■□□□□ 0.82
CCHCR1-216ENST00000502557 PSEN2P49810 448 aa20.18■□□□□ 0.82
CCHCR1-216ENST00000502557 PPP1R13LQ8WUF5 828 aa20.18■□□□□ 0.82
CCHCR1-216ENST00000502557 KIAA1217Q5T5P2 1943 aa20.17■□□□□ 0.82
CCHCR1-216ENST00000502557 HAS3O00219 553 aa20.17■□□□□ 0.82
CCHCR1-216ENST00000502557 EVI5O60447 810 aa20.17■□□□□ 0.82
CCHCR1-216ENST00000502557 GAS7O60861 476 aa20.17■□□□□ 0.82
CCHCR1-216ENST00000502557 PSMD10O75832 226 aa20.17■□□□□ 0.82
CCHCR1-216ENST00000502557 ATG7O95352 703 aa20.17■□□□□ 0.82
CCHCR1-216ENST00000502557 SYT1P21579 422 aa20.17■□□□□ 0.82
CCHCR1-216ENST00000502557 TLE2Q04725 743 aa20.17■□□□□ 0.82
CCHCR1-216ENST00000502557 MFSD10Q14728 455 aa20.17■□□□□ 0.82
CCHCR1-216ENST00000502557 LRCH2Q5VUJ6 765 aa20.17■□□□□ 0.82
CCHCR1-216ENST00000502557 ANKRD33Q7Z3H0 272 aa20.17■□□□□ 0.82
CCHCR1-216ENST00000502557 TRIM50Q86XT4 487 aa20.17■□□□□ 0.82
CCHCR1-216ENST00000502557 POTEDQ86YR6 584 aa20.17■□□□□ 0.82
CCHCR1-216ENST00000502557 C7orf61Q8IZ16 206 aa20.17■□□□□ 0.82
CCHCR1-216ENST00000502557 PCYT2Q99447 389 aa20.17■□□□□ 0.82
CCHCR1-216ENST00000502557 KATNAL1Q9BW62 490 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms