RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	CCSER1	Q9C0I3	900 aa		13.72	□□□□□ -0.21
MATR3-231	ENST00000502394	TTC12	Q9H892	705 aa	Predicted RBP	13.72	□□□□□ -0.21
MATR3-231	ENST00000502394	DDX19A	Q9NUU7	478 aa	Known RBP	13.72	□□□□□ -0.21
MATR3-231	ENST00000502394	DACT1	Q9NYF0	836 aa		13.72	□□□□□ -0.21
MATR3-231	ENST00000502394	VAV3	Q9UKW4	847 aa		13.72	□□□□□ -0.21
MATR3-231	ENST00000502394	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.72	□□□□□ -0.21
MATR3-231	ENST00000502394	SLC15A5	A6NIM6	579 aa		13.71	□□□□□ -0.21
MATR3-231	ENST00000502394	DHX15	O43143	795 aa	Known RBP	13.71	□□□□□ -0.21
MATR3-231	ENST00000502394	MYCL	P12524	364 aa	Predicted RBP	13.71	□□□□□ -0.21
MATR3-231	ENST00000502394	ICAM3	P32942	547 aa		13.71	□□□□□ -0.21
MATR3-231	ENST00000502394	MORN1	Q5T089	497 aa		13.71	□□□□□ -0.21
MATR3-231	ENST00000502394	USP6NL	Q92738	828 aa		13.71	□□□□□ -0.21
MATR3-231	ENST00000502394	AGO4	Q9HCK5	861 aa	Known RBP	13.71	□□□□□ -0.21
MATR3-231	ENST00000502394	KCNH7	Q9NS40	1196 aa		13.71	□□□□□ -0.21
MATR3-231	ENST00000502394	FAM13B	Q9NYF5	915 aa		13.71	□□□□□ -0.21
MATR3-231	ENST00000502394	DIS3	Q9Y2L1	958 aa	Known RBP	13.71	□□□□□ -0.21
MATR3-231	ENST00000502394	PP2D1	A8MPX8	630 aa		13.7	□□□□□ -0.22
MATR3-231	ENST00000502394	MAFG	O15525	162 aa		13.7	□□□□□ -0.22
MATR3-231	ENST00000502394	ZNF202	O95125	648 aa		13.7	□□□□□ -0.22
MATR3-231	ENST00000502394	TEC	P42680	631 aa		13.7	□□□□□ -0.22
MATR3-231	ENST00000502394	SYK	P43405	635 aa		13.7	□□□□□ -0.22
MATR3-231	ENST00000502394	HTRA3	P83110	453 aa		13.7	□□□□□ -0.22
MATR3-231	ENST00000502394	PPP2R5C	Q13362	524 aa		13.7	□□□□□ -0.22
MATR3-231	ENST00000502394	STXBP2	Q15833	593 aa		13.7	□□□□□ -0.22
MATR3-231	ENST00000502394	E2F4	Q16254	413 aa		13.7	□□□□□ -0.22
MATR3-231	ENST00000502394	TMEM266	Q2M3C6	531 aa		13.7	□□□□□ -0.22
MATR3-231	ENST00000502394	TPRN	Q4KMQ1	711 aa		13.7	□□□□□ -0.22
MATR3-231	ENST00000502394	WDR78	Q5VTH9	848 aa		13.7	□□□□□ -0.22
MATR3-231	ENST00000502394	CAVIN1	Q6NZI2	390 aa	Known RBP	13.7	□□□□□ -0.22
MATR3-231	ENST00000502394	TIGD1	Q96MW7	591 aa		13.7	□□□□□ -0.22
MATR3-231	ENST00000502394	RIT2	Q99578	217 aa		13.7	□□□□□ -0.22
MATR3-231	ENST00000502394	CLSTN2	Q9H4D0	955 aa		13.7	□□□□□ -0.22
MATR3-231	ENST00000502394	KCNH3	Q9ULD8	1083 aa		13.7	□□□□□ -0.22
MATR3-231	ENST00000502394	PCDHA12	Q9UN75	941 aa		13.7	□□□□□ -0.22
MATR3-231	ENST00000502394	SPATA31C2	B4DYI2	1134 aa		13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	IPO5	O00410	1097 aa	Known RBP	13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	SLC26A4	O43511	780 aa		13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	ACTN4	O43707	911 aa	Known RBP	13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	EIF3J	O75822	258 aa	Known RBP	13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	IGHA2	P01877	340 aa		13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	HOXC6	P09630	235 aa		13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	CTGF	P29279	349 aa		13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	CDC25A	P30304	524 aa		13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	ITGB3BP	Q13352	177 aa	Predicted RBP	13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	MTMR1	Q13613	665 aa		13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	HYI	Q5T013	277 aa		13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	CCDC183	Q5T5S1	534 aa		13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	MAMDC4	Q6UXC1	1216 aa		13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	RBM43	Q6ZSC3	357 aa	Known RBP	13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	OTOP1	Q7RTM1	612 aa		13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	NLRX1	Q86UT6	975 aa		13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	LRRC15	Q8TF66	581 aa		13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	BBX	Q8WY36	941 aa	Predicted RBP	13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	ZNF577	Q9BSK1	485 aa		13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	LRWD1	Q9UFC0	647 aa		13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	GJD2	Q9UKL4	321 aa		13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	IVNS1ABP	Q9Y6Y0	642 aa		13.69	□□□□□ -0.22
MATR3-231	ENST00000502394	ASB14	A6NK59	587 aa		13.68	□□□□□ -0.22
MATR3-231	ENST00000502394		B4DLN1	442 aa		13.68	□□□□□ -0.22
MATR3-231	ENST00000502394	ATP9A	O75110	1047 aa		13.68	□□□□□ -0.22
MATR3-231	ENST00000502394	HOXB1	P14653	301 aa	Predicted RBP	13.68	□□□□□ -0.22
MATR3-231	ENST00000502394	KCNA2	P16389	499 aa		13.68	□□□□□ -0.22
MATR3-231	ENST00000502394	MAP2K5	Q13163	448 aa		13.68	□□□□□ -0.22
MATR3-231	ENST00000502394	NAALADL2	Q58DX5	795 aa		13.68	□□□□□ -0.22
MATR3-231	ENST00000502394	LRCH2	Q5VUJ6	765 aa		13.68	□□□□□ -0.22
MATR3-231	ENST00000502394	CABP7	Q86V35	215 aa		13.68	□□□□□ -0.22
MATR3-231	ENST00000502394	NPLOC4	Q8TAT6	608 aa		13.68	□□□□□ -0.22
MATR3-231	ENST00000502394	CDHR1	Q96JP9	859 aa		13.68	□□□□□ -0.22
MATR3-231	ENST00000502394	UIMC1	Q96RL1	719 aa		13.68	□□□□□ -0.22
MATR3-231	ENST00000502394	NUDT12	Q9BQG2	462 aa		13.68	□□□□□ -0.22
MATR3-231	ENST00000502394	RAB34	Q9BZG1	259 aa		13.68	□□□□□ -0.22
MATR3-231	ENST00000502394	KATNBL1	Q9H079	304 aa		13.68	□□□□□ -0.22
MATR3-231	ENST00000502394	RNF186	Q9NXI6	227 aa		13.68	□□□□□ -0.22
MATR3-231	ENST00000502394	DOCK3	Q8IZD9	2030 aa		13.68	□□□□□ -0.22
MATR3-231	ENST00000502394	PLXNA1	Q9UIW2	1896 aa		13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	NFASC	O94856	1347 aa		13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	EML1	O00423	815 aa		13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	POLR2D	O15514	142 aa	Known RBP	13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	MARCH6	O60337	910 aa		13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	KIN	O60870	393 aa	Known RBP	13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	UBA7	P41226	1012 aa		13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	PDE4D	Q08499	809 aa		13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	GRB10	Q13322	594 aa		13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	KARS	Q15046	597 aa	Known RBP	13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	GNPTAB	Q3T906	1256 aa		13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	LONRF3	Q496Y0	759 aa		13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	TMEM119	Q4V9L6	283 aa		13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	KRBA2	Q6ZNG9	492 aa		13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	SH3RF1	Q7Z6J0	888 aa		13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	SYAP1	Q96A49	352 aa	Predicted RBP	13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	MARVELD3	Q96A59	401 aa		13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	MAML3	Q96JK9	1138 aa		13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	PNMA5	Q96PV4	448 aa		13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	SENP7	Q9BQF6	1050 aa		13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	PYM1	Q9BRP8	204 aa	Known RBP	13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	TEKT3	Q9BXF9	490 aa		13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	NUP62CL	Q9H1M0	184 aa		13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	UNC45A	Q9H3U1	944 aa		13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	DISC1	Q9NRI5	854 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms