RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 FAM86C1Q9NVL1 165 aa10.65□□□□□ -0.7
CCDC171-209ENST00000498725 RCAN3Q9UKA8 241 aa10.65□□□□□ -0.7
CCDC171-209ENST00000498725 LAMA4Q16363 1823 aa10.65□□□□□ -0.71
CCDC171-209ENST00000498725 LOXHD1Q8IVV2 1947 aa10.64□□□□□ -0.71
CCDC171-209ENST00000498725 NEDD4P46934 1319 aa10.64□□□□□ -0.71
CCDC171-209ENST00000498725 MYO7AQ13402 2215 aa10.64□□□□□ -0.71
CCDC171-209ENST00000498725 A0A0D9SFI3 127 aa10.64□□□□□ -0.71
CCDC171-209ENST00000498725 SMIM10L2AP0DMW4 78 aa10.64□□□□□ -0.71
CCDC171-209ENST00000498725 SMIM10L2BP0DMW5 78 aa10.64□□□□□ -0.71
CCDC171-209ENST00000498725 SNHG28P0DPA3 235 aa10.64□□□□□ -0.71
CCDC171-209ENST00000498725 SP2Q02086 613 aa10.64□□□□□ -0.71
CCDC171-209ENST00000498725 ALX1Q15699 326 aa10.64□□□□□ -0.71
CCDC171-209ENST00000498725 SMAD2Q15796 467 aaKnown RBP10.64□□□□□ -0.71
CCDC171-209ENST00000498725 MYSM1Q5VVJ2 828 aa10.64□□□□□ -0.71
CCDC171-209ENST00000498725 TBC1D10CQ8IV04 446 aa10.64□□□□□ -0.71
CCDC171-209ENST00000498725 PNMA1Q8ND90 353 aa10.64□□□□□ -0.71
CCDC171-209ENST00000498725 EMID1Q96A84 441 aaPredicted RBP10.64□□□□□ -0.71
CCDC171-209ENST00000498725 PBXIP1Q96AQ6 731 aa10.64□□□□□ -0.71
CCDC171-209ENST00000498725 IL17RAQ96F46 866 aa10.64□□□□□ -0.71
CCDC171-209ENST00000498725 TTC14Q96N46 770 aa10.64□□□□□ -0.71
CCDC171-209ENST00000498725 BCAS3Q9H6U6 928 aa10.64□□□□□ -0.71
CCDC171-209ENST00000498725 MLXIPQ9HAP2 919 aa10.64□□□□□ -0.71
CCDC171-209ENST00000498725 MRPL11Q9Y3B7 192 aaKnown RBP10.64□□□□□ -0.71
CCDC171-209ENST00000498725 SUPT16HQ9Y5B9 1047 aaKnown RBP10.64□□□□□ -0.71
CCDC171-209ENST00000498725 ZNF318Q5VUA4 2279 aa10.64□□□□□ -0.71
CCDC171-209ENST00000498725 PLXNA4Q9HCM2 1894 aa10.64□□□□□ -0.71
CCDC171-209ENST00000498725 TMEM221A6NGB7 291 aa10.63□□□□□ -0.71
CCDC171-209ENST00000498725 H3BRB1 525 aa10.63□□□□□ -0.71
CCDC171-209ENST00000498725 M0R296 226 aa10.63□□□□□ -0.71
CCDC171-209ENST00000498725 TBX10O75333 385 aa10.63□□□□□ -0.71
CCDC171-209ENST00000498725 PPFIA4O75335 1185 aa10.63□□□□□ -0.71
CCDC171-209ENST00000498725 HSPD1P10809 573 aaKnown RBP10.63□□□□□ -0.71
CCDC171-209ENST00000498725 HOXA13P31271 388 aaPredicted RBP10.63□□□□□ -0.71
CCDC171-209ENST00000498725 NDUFV1P49821 464 aa10.63□□□□□ -0.71
CCDC171-209ENST00000498725 NMIQ13287 307 aaPredicted RBP10.63□□□□□ -0.71
CCDC171-209ENST00000498725 HERC4Q5GLZ8 1057 aaPredicted RBP10.63□□□□□ -0.71
CCDC171-209ENST00000498725 CELF3Q5SZQ8 465 aaKnown RBP10.63□□□□□ -0.71
CCDC171-209ENST00000498725 ZNF589Q86UQ0 364 aaPredicted RBP10.63□□□□□ -0.71
CCDC171-209ENST00000498725 IL31RAQ8NI17 732 aa10.63□□□□□ -0.71
CCDC171-209ENST00000498725 POP1Q99575 1024 aaKnown RBP10.63□□□□□ -0.71
CCDC171-209ENST00000498725 C16orf70Q9BSU1 422 aa10.63□□□□□ -0.71
CCDC171-209ENST00000498725 RNPEPQ9H4A4 650 aa10.63□□□□□ -0.71
CCDC171-209ENST00000498725 TUT1Q9H6E5 874 aaKnown RBP10.63□□□□□ -0.71
CCDC171-209ENST00000498725 KAT14Q9H8E8 782 aa10.63□□□□□ -0.71
CCDC171-209ENST00000498725 JMJD4Q9H9V9 463 aa10.63□□□□□ -0.71
CCDC171-209ENST00000498725 ALG13Q9NP73 1137 aaKnown RBP10.63□□□□□ -0.71
CCDC171-209ENST00000498725 HELLSQ9NRZ9 838 aa10.63□□□□□ -0.71
CCDC171-209ENST00000498725 SETD4Q9NVD3 440 aa10.63□□□□□ -0.71
CCDC171-209ENST00000498725 CD207Q9UJ71 328 aa10.63□□□□□ -0.71
CCDC171-209ENST00000498725 CCDC171Q6TFL3 1326 aa10.62□□□□□ -0.71
CCDC171-209ENST00000498725 TRIOO75962 3097 aa10.62□□□□□ -0.71
CCDC171-209ENST00000498725 TRIM6-TRIM34B2RNG4 842 aa10.62□□□□□ -0.71
CCDC171-209ENST00000498725 KDM4AO75164 1064 aa10.62□□□□□ -0.71
CCDC171-209ENST00000498725 RGS20O76081 388 aa10.62□□□□□ -0.71
CCDC171-209ENST00000498725 LGALS2P05162 132 aa10.62□□□□□ -0.71
CCDC171-209ENST00000498725 IBSPP21815 317 aaPredicted RBP10.62□□□□□ -0.71
CCDC171-209ENST00000498725 UBA1P22314 1058 aaKnown RBP10.62□□□□□ -0.71
CCDC171-209ENST00000498725 BMPR1AP36894 532 aa10.62□□□□□ -0.71
CCDC171-209ENST00000498725 CLCN6P51797 869 aa10.62□□□□□ -0.71
CCDC171-209ENST00000498725 SP4Q02446 784 aa10.62□□□□□ -0.71
CCDC171-209ENST00000498725 MCMDC2Q4G0Z9 681 aa10.62□□□□□ -0.71
CCDC171-209ENST00000498725 UTP14CQ5TAP6 766 aaKnown RBP10.62□□□□□ -0.71
CCDC171-209ENST00000498725 SUGP1Q8IWZ8 645 aaKnown RBP10.62□□□□□ -0.71
CCDC171-209ENST00000498725 ESR2Q92731 530 aa10.62□□□□□ -0.71
CCDC171-209ENST00000498725 EDAQ92838 391 aa10.62□□□□□ -0.71
CCDC171-209ENST00000498725 EVI5LQ96CN4 794 aa10.62□□□□□ -0.71
CCDC171-209ENST00000498725 PDCD2LQ9BRP1 358 aa10.62□□□□□ -0.71
CCDC171-209ENST00000498725 C11orf84Q9BUA3 381 aaPredicted RBP10.62□□□□□ -0.71
CCDC171-209ENST00000498725 ZBTB47Q9UFB7 747 aaPredicted RBP10.62□□□□□ -0.71
CCDC171-209ENST00000498725 PIEZO1Q92508 2521 aa10.62□□□□□ -0.71
CCDC171-209ENST00000498725 COL4A6Q14031 1691 aa10.62□□□□□ -0.71
CCDC171-209ENST00000498725 TECTAO75443 2155 aa10.61□□□□□ -0.71
CCDC171-209ENST00000498725 NOP56O00567 594 aaKnown RBP10.61□□□□□ -0.71
CCDC171-209ENST00000498725 OPLAHO14841 1288 aa10.61□□□□□ -0.71
CCDC171-209ENST00000498725 NCK2O43639 380 aa10.61□□□□□ -0.71
CCDC171-209ENST00000498725 PARP1P09874 1014 aaKnown RBP10.61□□□□□ -0.71
CCDC171-209ENST00000498725 GHRP10912 638 aa10.61□□□□□ -0.71
CCDC171-209ENST00000498725 CCND2P30279 289 aa10.61□□□□□ -0.71
CCDC171-209ENST00000498725 PTPN5P54829 565 aa10.61□□□□□ -0.71
CCDC171-209ENST00000498725 ARHGAP4P98171 946 aa10.61□□□□□ -0.71
CCDC171-209ENST00000498725 SMAD4Q13485 552 aaKnown RBP10.61□□□□□ -0.71
CCDC171-209ENST00000498725 BTG3Q14201 252 aaPredicted RBP10.61□□□□□ -0.71
CCDC171-209ENST00000498725 COL19A1Q14993 1142 aa10.61□□□□□ -0.71
CCDC171-209ENST00000498725 PGM5Q15124 567 aa10.61□□□□□ -0.71
CCDC171-209ENST00000498725 CTC1Q2NKJ3 1217 aa10.61□□□□□ -0.71
CCDC171-209ENST00000498725 TRIM67Q6ZTA4 783 aa10.61□□□□□ -0.71
CCDC171-209ENST00000498725 RBM23Q86U06 439 aaKnown RBP10.61□□□□□ -0.71
CCDC171-209ENST00000498725 FCHSD1Q86WN1 690 aa10.61□□□□□ -0.71
CCDC171-209ENST00000498725 TRIM50Q86XT4 487 aa10.61□□□□□ -0.71
CCDC171-209ENST00000498725 ADGRA3Q8IWK6 1321 aa10.6□□□□□ -0.71
CCDC171-209ENST00000498725 B4E1Z4 1266 aa10.6□□□□□ -0.71
CCDC171-209ENST00000498725 ST18O60284 1047 aa10.6□□□□□ -0.71
CCDC171-209ENST00000498725 HOXD8P13378 290 aaPredicted RBP10.6□□□□□ -0.71
CCDC171-209ENST00000498725 HSD17B4P51659 736 aa10.6□□□□□ -0.71
CCDC171-209ENST00000498725 ADAM15Q13444 863 aa10.6□□□□□ -0.71
CCDC171-209ENST00000498725 PAN2Q504Q3 1202 aaKnown RBP10.6□□□□□ -0.71
CCDC171-209ENST00000498725 ASPRV1Q53RT3 343 aa10.6□□□□□ -0.71
CCDC171-209ENST00000498725 ANKRD45Q5TZF3 282 aa10.6□□□□□ -0.71
CCDC171-209ENST00000498725 KCNV1Q6PIU1 500 aa10.6□□□□□ -0.71
CCDC171-209ENST00000498725 CYFIP1Q7L576 1253 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms