RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 ADAMTS3O15072 1205 aa18.47■□□□□ 0.55
NR1H3-227ENST00000498548 ADCY7P51828 1080 aa18.47■□□□□ 0.55
NR1H3-227ENST00000498548 CCT2P78371 535 aaKnown RBP18.47■□□□□ 0.55
NR1H3-227ENST00000498548 METTL7BQ6UX53 244 aa18.47■□□□□ 0.55
NR1H3-227ENST00000498548 MYLIPQ8WY64 445 aa18.47■□□□□ 0.55
NR1H3-227ENST00000498548 WNT8BQ93098 351 aa18.47■□□□□ 0.55
NR1H3-227ENST00000498548 FTOQ9C0B1 505 aaKnown RBP eCLIP18.47■□□□□ 0.55
NR1H3-227ENST00000498548 BARHL2Q9NY43 387 aa18.47■□□□□ 0.55
NR1H3-227ENST00000498548 UBIAD1Q9Y5Z9 338 aa18.47■□□□□ 0.55
NR1H3-227ENST00000498548 TANC1Q9C0D5 1861 aa18.46■□□□□ 0.55
NR1H3-227ENST00000498548 H3BRB1 525 aa18.46■□□□□ 0.55
NR1H3-227ENST00000498548 PITPNM1O00562 1244 aa18.46■□□□□ 0.55
NR1H3-227ENST00000498548 RABGGTBP53611 331 aa18.46■□□□□ 0.55
NR1H3-227ENST00000498548 RUFY3Q7L099 469 aa18.46■□□□□ 0.55
NR1H3-227ENST00000498548 TRIM50Q86XT4 487 aa18.46■□□□□ 0.55
NR1H3-227ENST00000498548 PHKBQ93100 1093 aa18.46■□□□□ 0.55
NR1H3-227ENST00000498548 TIFAQ96CG3 184 aa18.46■□□□□ 0.55
NR1H3-227ENST00000498548 AGXT2Q9BYV1 514 aa18.46■□□□□ 0.55
NR1H3-227ENST00000498548 MTIF3Q9H2K0 278 aaKnown RBP18.46■□□□□ 0.55
NR1H3-227ENST00000498548 TUT1Q9H6E5 874 aaKnown RBP18.46■□□□□ 0.55
NR1H3-227ENST00000498548 JADE2Q9NQC1 790 aa18.46■□□□□ 0.55
NR1H3-227ENST00000498548 CKBP12277 381 aa18.45■□□□□ 0.54
NR1H3-227ENST00000498548 KCNA2P16389 499 aa18.45■□□□□ 0.54
NR1H3-227ENST00000498548 RCAN1P53805 252 aa18.45■□□□□ 0.54
NR1H3-227ENST00000498548 TOB2Q14106 344 aaPredicted RBP18.45■□□□□ 0.54
NR1H3-227ENST00000498548 GPNMBQ14956 572 aa18.45■□□□□ 0.54
NR1H3-227ENST00000498548 GRIN2CQ14957 1233 aa18.45■□□□□ 0.54
NR1H3-227ENST00000498548 PFKFB3Q16875 520 aaPredicted RBP18.45■□□□□ 0.54
NR1H3-227ENST00000498548 CCDC155Q8N6L0 562 aa18.45■□□□□ 0.54
NR1H3-227ENST00000498548 CYP2W1Q8TAV3 490 aa18.45■□□□□ 0.54
NR1H3-227ENST00000498548 CAGE1Q8TC20 777 aa18.45■□□□□ 0.54
NR1H3-227ENST00000498548 GPRASP2Q96D09 838 aa18.45■□□□□ 0.54
NR1H3-227ENST00000498548 SENP7Q9BQF6 1050 aa18.45■□□□□ 0.54
NR1H3-227ENST00000498548 NCOA5Q9HCD5 579 aaKnown RBP18.45■□□□□ 0.54
NR1H3-227ENST00000498548 ZSWIM6Q9HCJ5 1215 aa18.45■□□□□ 0.54
NR1H3-227ENST00000498548 SLC4A7Q9Y6M7 1214 aa18.45■□□□□ 0.54
NR1H3-227ENST00000498548 CCDC196A0A1B0GTZ2 297 aa18.44■□□□□ 0.54
NR1H3-227ENST00000498548 SMIM10L2AP0DMW4 78 aa18.44■□□□□ 0.54
NR1H3-227ENST00000498548 SMIM10L2BP0DMW5 78 aa18.44■□□□□ 0.54
NR1H3-227ENST00000498548 SCG2P13521 617 aa18.44■□□□□ 0.54
NR1H3-227ENST00000498548 MYOGP15173 224 aa18.44■□□□□ 0.54
NR1H3-227ENST00000498548 SELPP16109 830 aa18.44■□□□□ 0.54
NR1H3-227ENST00000498548 PDIA3P30101 505 aaKnown RBP18.44■□□□□ 0.54
NR1H3-227ENST00000498548 RFC2P35250 354 aa18.44■□□□□ 0.54
NR1H3-227ENST00000498548 PTK7Q13308 1070 aa18.44■□□□□ 0.54
NR1H3-227ENST00000498548 MTMR1Q13613 665 aa18.44■□□□□ 0.54
NR1H3-227ENST00000498548 PKN1Q16512 942 aa18.44■□□□□ 0.54
NR1H3-227ENST00000498548 TRIM71Q2Q1W2 868 aaKnown RBP18.44■□□□□ 0.54
NR1H3-227ENST00000498548 JAKMIP3Q5VZ66 844 aa18.44■□□□□ 0.54
NR1H3-227ENST00000498548 PPP1R18Q6NYC8 613 aa18.44■□□□□ 0.54
NR1H3-227ENST00000498548 LRRC8DQ7L1W4 858 aa18.44■□□□□ 0.54
NR1H3-227ENST00000498548 FBXL16Q8N461 479 aa18.44■□□□□ 0.54
NR1H3-227ENST00000498548 SLC17A8Q8NDX2 589 aa18.44■□□□□ 0.54
NR1H3-227ENST00000498548 AFAP1L1Q8TED9 768 aa18.44■□□□□ 0.54
NR1H3-227ENST00000498548 ANO3Q9BYT9 981 aa18.44■□□□□ 0.54
NR1H3-227ENST00000498548 UPF3BQ9BZI7 483 aaKnown RBP18.44■□□□□ 0.54
NR1H3-227ENST00000498548 NKX2-4Q9H2Z4 354 aa18.44■□□□□ 0.54
NR1H3-227ENST00000498548 RNPEPQ9H4A4 650 aa18.44■□□□□ 0.54
NR1H3-227ENST00000498548 ZNF576Q9H609 170 aa18.44■□□□□ 0.54
NR1H3-227ENST00000498548 EHMT1Q9H9B1 1298 aa18.44■□□□□ 0.54
NR1H3-227ENST00000498548 YBX2Q9Y2T7 364 aaKnown RBP18.44■□□□□ 0.54
NR1H3-227ENST00000498548 GSTTP1A0A1W2PQM5 241 aa18.43■□□□□ 0.54
NR1H3-227ENST00000498548 C17orf102A2RUQ5 167 aa18.43■□□□□ 0.54
NR1H3-227ENST00000498548 TREHO43280 583 aa18.43■□□□□ 0.54
NR1H3-227ENST00000498548 PRPF3O43395 683 aaKnown RBP18.43■□□□□ 0.54
NR1H3-227ENST00000498548 PFKMP08237 780 aa18.43■□□□□ 0.54
NR1H3-227ENST00000498548 ARP10275 920 aa18.43■□□□□ 0.54
NR1H3-227ENST00000498548 CLK2P49760 499 aaKnown RBP18.43■□□□□ 0.54
NR1H3-227ENST00000498548 TCTN1Q2MV58 587 aa18.43■□□□□ 0.54
NR1H3-227ENST00000498548 ZNF618Q5T7W0 954 aa18.43■□□□□ 0.54
NR1H3-227ENST00000498548 ERICH6BQ5W0A0 696 aa18.43■□□□□ 0.54
NR1H3-227ENST00000498548 ATP6V0A1Q93050 837 aa18.43■□□□□ 0.54
NR1H3-227ENST00000498548 MXRA8Q9BRK3 442 aa18.43■□□□□ 0.54
NR1H3-227ENST00000498548 SLC26A6Q9BXS9 759 aa18.43■□□□□ 0.54
NR1H3-227ENST00000498548 SETD4Q9NVD3 440 aa18.43■□□□□ 0.54
NR1H3-227ENST00000498548 MSRAQ9UJ68 235 aa18.43■□□□□ 0.54
NR1H3-227ENST00000498548 CYP46A1Q9Y6A2 500 aa18.43■□□□□ 0.54
NR1H3-227ENST00000498548 KAT6AQ92794 2004 aa18.43■□□□□ 0.54
NR1H3-227ENST00000498548 hCG_1984214I3L0E3 225 aa18.42■□□□□ 0.54
NR1H3-227ENST00000498548 EPB41L2O43491 1005 aaKnown RBP18.42■□□□□ 0.54
NR1H3-227ENST00000498548 NBNO60934 754 aa18.42■□□□□ 0.54
NR1H3-227ENST00000498548 FOSP01100 380 aaPredicted RBP18.42■□□□□ 0.54
NR1H3-227ENST00000498548 ACTN1P12814 892 aa18.42■□□□□ 0.54
NR1H3-227ENST00000498548 TCF7P36402 384 aaPredicted RBP18.42■□□□□ 0.54
NR1H3-227ENST00000498548 NTRK3Q16288 839 aa18.42■□□□□ 0.54
NR1H3-227ENST00000498548 ZNF713Q8N859 430 aaPredicted RBP18.42■□□□□ 0.54
NR1H3-227ENST00000498548 GIMAP8Q8ND71 665 aaPredicted RBP18.42■□□□□ 0.54
NR1H3-227ENST00000498548 CDHR1Q96JP9 859 aa18.42■□□□□ 0.54
NR1H3-227ENST00000498548 UIMC1Q96RL1 719 aa18.42■□□□□ 0.54
NR1H3-227ENST00000498548 NID2Q14112 1375 aa18.42■□□□□ 0.54
NR1H3-227ENST00000498548 COL6A3P12111 3177 aa18.41■□□□□ 0.54
NR1H3-227ENST00000498548 TMEM265A0A087WTH1 108 aa18.41■□□□□ 0.54
NR1H3-227ENST00000498548 CENPBP07199 599 aaPredicted RBP18.41■□□□□ 0.54
NR1H3-227ENST00000498548 ATP2A2P16615 1042 aaKnown RBP18.41■□□□□ 0.54
NR1H3-227ENST00000498548 AKAP17AQ02040 695 aaKnown RBP18.41■□□□□ 0.54
NR1H3-227ENST00000498548 RBL2Q08999 1139 aa18.41■□□□□ 0.54
NR1H3-227ENST00000498548 STK3Q13188 491 aa18.41■□□□□ 0.54
NR1H3-227ENST00000498548 TRAF7Q6Q0C0 670 aa18.41■□□□□ 0.54
NR1H3-227ENST00000498548 SEPT1Q8WYJ6 367 aa18.41■□□□□ 0.54
NR1H3-227ENST00000498548 KCNH7Q9NS40 1196 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms