RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 GGA2Q9UJY4 613 aa12.69□□□□□ -0.38
PBX1-211ENST00000498497 NKRFO15226 690 aaKnown RBP eCLIP12.68□□□□□ -0.38
PBX1-211ENST00000498497 UBE4AQ14139 1066 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 ACAP1Q15027 740 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 PTPAQ15257 358 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 SCUBE1Q8IWY4 988 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 SIX5Q8N196 739 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 SMC1BQ8NDV3 1235 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 PRPF31Q8WWY3 499 aaKnown RBP12.68□□□□□ -0.38
PBX1-211ENST00000498497 DTNBP1Q96EV8 351 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 HSPBAP1Q96EW2 488 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 ABHD8Q96I13 439 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 FAM129AQ9BZQ8 928 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 RNPEPL1Q9HAU8 725 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 SENP2Q9HC62 589 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.68□□□□□ -0.38
PBX1-211ENST00000498497 CHPF2Q9P2E5 772 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 AMACRQ9UHK6 382 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 EFR3BQ9Y2G0 817 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 PNPLA6Q8IY17 1366 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 KCNK3O14649 394 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 CALB2P22676 271 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 NEK3P51956 506 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 MTHFSDQ2M296 383 aaKnown RBP12.68□□□□□ -0.38
PBX1-211ENST00000498497 OXER1Q8TDS5 423 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 MTMR8Q96EF0 704 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 CCDC51Q96ER9 411 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 ADAM33Q9BZ11 813 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 HECW2Q9P2P5 1572 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 NUTM2BA6NNL0 878 aaPredicted RBP12.68□□□□□ -0.38
PBX1-211ENST00000498497 NUTM2EB1AL46 878 aaPredicted RBP12.68□□□□□ -0.38
PBX1-211ENST00000498497 CBX6O95503 412 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 TPBGLP0DKB5 382 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 EEF2P13639 858 aaKnown RBP12.68□□□□□ -0.38
PBX1-211ENST00000498497 PSMD7P51665 324 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 MDM2Q00987 491 aaPredicted RBP12.68□□□□□ -0.38
PBX1-211ENST00000498497 RCN1Q15293 331 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 KIAA0753Q2KHM9 967 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 SMUG1Q53HV7 270 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 TMEM53Q6P2H8 277 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 LRRC8CQ8TDW0 803 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 SCG3Q8WXD2 468 aaKnown RBP12.68□□□□□ -0.38
PBX1-211ENST00000498497 RABL2BQ9UNT1 228 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 R3HDM2Q9Y2K5 976 aaKnown RBP12.68□□□□□ -0.38
PBX1-211ENST00000498497 LMTK2Q8IWU2 1503 aa12.68□□□□□ -0.38
PBX1-211ENST00000498497 SART1O43290 800 aaKnown RBP12.67□□□□□ -0.38
PBX1-211ENST00000498497 CREB1P16220 341 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 TRIM67Q6ZTA4 783 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 TTLL11Q8NHH1 800 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 PIGOQ8TEQ8 1089 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 TRIM47Q96LD4 638 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 CEP295NLQ96MC4 621 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.67□□□□□ -0.38
PBX1-211ENST00000498497 INIPQ9NRY2 104 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 TSC22D4Q9Y3Q8 395 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 CROCC2H7BZ55 1655 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 AFF2P51816 1311 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 PEX11AO75192 247 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 PRKCIP41743 596 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 MAGEA1P43355 309 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 RTP1P59025 263 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 MCMDC2Q4G0Z9 681 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 TCP11X2Q5H9J9 407 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 ERMARDQ5T6L9 678 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 GGT6Q6P531 493 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 GIGYF2Q6Y7W6 1299 aaKnown RBP12.67□□□□□ -0.38
PBX1-211ENST00000498497 RALYLQ86SE5 291 aaKnown RBP12.67□□□□□ -0.38
PBX1-211ENST00000498497 UTP4Q969X6 686 aaKnown RBP12.67□□□□□ -0.38
PBX1-211ENST00000498497 CDK5RAP3Q96JB5 506 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 RAB17Q9H0T7 212 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 MMRN2Q9H8L6 949 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 KCNMB3Q9NPA1 279 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 SUN2Q9UH99 717 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 TMEM98Q9Y2Y6 226 aa12.67□□□□□ -0.38
PBX1-211ENST00000498497 PGM3O95394 542 aa12.66□□□□□ -0.38
PBX1-211ENST00000498497 EIF4A3P38919 411 aaKnown RBP12.66□□□□□ -0.38
PBX1-211ENST00000498497 PHLDB3Q6NSJ2 640 aa12.66□□□□□ -0.38
PBX1-211ENST00000498497 STK32AQ8WU08 396 aa12.66□□□□□ -0.38
PBX1-211ENST00000498497 ERP27Q96DN0 273 aa12.66□□□□□ -0.38
PBX1-211ENST00000498497 TRIM51Q9BSJ1 452 aa12.66□□□□□ -0.38
PBX1-211ENST00000498497 NUP85Q9BW27 656 aa12.66□□□□□ -0.38
PBX1-211ENST00000498497 TLR10Q9BXR5 811 aa12.66□□□□□ -0.38
PBX1-211ENST00000498497 CABP5Q9NP86 173 aa12.66□□□□□ -0.38
PBX1-211ENST00000498497 LZTS1Q9Y250 596 aa12.66□□□□□ -0.38
PBX1-211ENST00000498497 PCDHA13Q9Y5I0 950 aa12.66□□□□□ -0.38
PBX1-211ENST00000498497 HOXD12P35452 270 aa12.66□□□□□ -0.38
PBX1-211ENST00000498497 EIF4A2Q14240 407 aaKnown RBP12.66□□□□□ -0.38
PBX1-211ENST00000498497 SNX30Q5VWJ9 437 aa12.66□□□□□ -0.38
PBX1-211ENST00000498497 TMEM214Q6NUQ4 689 aaKnown RBP12.66□□□□□ -0.38
PBX1-211ENST00000498497 RFWD3Q6PCD5 774 aa12.66□□□□□ -0.38
PBX1-211ENST00000498497 ZBTB8BQ8NAP8 495 aaPredicted RBP12.66□□□□□ -0.38
PBX1-211ENST00000498497 SLC35B4Q969S0 331 aa12.66□□□□□ -0.38
PBX1-211ENST00000498497 RNF25Q96BH1 459 aaPredicted RBP12.66□□□□□ -0.38
PBX1-211ENST00000498497 IWS1Q96ST2 819 aa12.66□□□□□ -0.38
PBX1-211ENST00000498497 DBNDD2Q9BQY9 259 aa12.66□□□□□ -0.38
PBX1-211ENST00000498497 CDC42BPAQ5VT25 1732 aa12.66□□□□□ -0.38
PBX1-211ENST00000498497 C5orf60A6NFR6 353 aa12.66□□□□□ -0.38
PBX1-211ENST00000498497 RGS16O15492 202 aaPredicted RBP12.66□□□□□ -0.38
PBX1-211ENST00000498497 PALMO75781 387 aa12.66□□□□□ -0.38
PBX1-211ENST00000498497 KRT36O76013 467 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms