RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 CNNM4Q6P4Q7 775 aa6.38□□□□□ -1.39
PTPRK-215ENST00000498284 UBE2R2Q712K3 238 aaPredicted RBP6.38□□□□□ -1.39
PTPRK-215ENST00000498284 OVCH1Q7RTY7 1134 aa6.38□□□□□ -1.39
PTPRK-215ENST00000498284 AMIGO3Q86WK7 504 aa6.38□□□□□ -1.39
PTPRK-215ENST00000498284 TRIM48Q8IWZ4 208 aa6.38□□□□□ -1.39
PTPRK-215ENST00000498284 RBM12BQ8IXT5 1001 aaKnown RBP6.38□□□□□ -1.39
PTPRK-215ENST00000498284 CISD2Q8N5K1 135 aaKnown RBP6.38□□□□□ -1.39
PTPRK-215ENST00000498284 ARRDC4Q8NCT1 418 aa6.38□□□□□ -1.39
PTPRK-215ENST00000498284 SH3RF2Q8TEC5 729 aa6.38□□□□□ -1.39
PTPRK-215ENST00000498284 MZB1Q8WU39 189 aa6.38□□□□□ -1.39
PTPRK-215ENST00000498284 DDX1Q92499 740 aaKnown RBP6.38□□□□□ -1.39
PTPRK-215ENST00000498284 GCM1Q9NP62 436 aa6.38□□□□□ -1.39
PTPRK-215ENST00000498284 ASH2LQ9UBL3 628 aa6.38□□□□□ -1.39
PTPRK-215ENST00000498284 PCDHA5Q9Y5H7 936 aa6.38□□□□□ -1.39
PTPRK-215ENST00000498284 IRS2Q9Y4H2 1338 aa6.38□□□□□ -1.39
PTPRK-215ENST00000498284 FAM83GA6ND36 823 aa6.37□□□□□ -1.39
PTPRK-215ENST00000498284 GLRX3O76003 335 aaKnown RBP6.37□□□□□ -1.39
PTPRK-215ENST00000498284 MYCLP1P12525 358 aaPredicted RBP6.37□□□□□ -1.39
PTPRK-215ENST00000498284 NCAM1P13591 858 aa6.37□□□□□ -1.39
PTPRK-215ENST00000498284 EPHB3P54753 998 aa6.37□□□□□ -1.39
PTPRK-215ENST00000498284 TUSC3Q13454 348 aa6.37□□□□□ -1.39
PTPRK-215ENST00000498284 TARBP2Q15633 366 aaKnown RBP6.37□□□□□ -1.39
PTPRK-215ENST00000498284 TMEM177Q53S58 311 aa6.37□□□□□ -1.39
PTPRK-215ENST00000498284 PIK3R6Q5UE93 754 aa6.37□□□□□ -1.39
PTPRK-215ENST00000498284 CDCA2Q69YH5 1023 aaPredicted RBP6.37□□□□□ -1.39
PTPRK-215ENST00000498284 PTRH1Q86Y79 214 aaKnown RBP6.37□□□□□ -1.39
PTPRK-215ENST00000498284 POU5F2Q8N7G0 328 aa6.37□□□□□ -1.39
PTPRK-215ENST00000498284 WNK4Q96J92 1243 aa6.37□□□□□ -1.39
PTPRK-215ENST00000498284 TARS2Q9BW92 718 aaKnown RBP6.37□□□□□ -1.39
PTPRK-215ENST00000498284 CD244Q9BZW8 370 aa6.37□□□□□ -1.39
PTPRK-215ENST00000498284 RNF38Q9H0F5 515 aa6.37□□□□□ -1.39
PTPRK-215ENST00000498284 SMURF1Q9HCE7 757 aa6.37□□□□□ -1.39
PTPRK-215ENST00000498284 A0A087X0B3 334 aa6.36□□□□□ -1.39
PTPRK-215ENST00000498284 M0R2C6 588 aa6.36□□□□□ -1.39
PTPRK-215ENST00000498284 ETV2O00321 342 aaPredicted RBP6.36□□□□□ -1.39
PTPRK-215ENST00000498284 N4BP3O15049 544 aa6.36□□□□□ -1.39
PTPRK-215ENST00000498284 TMEM253P0C7T8 217 aa6.36□□□□□ -1.39
PTPRK-215ENST00000498284 YBX3P16989 372 aaKnown RBP eCLIP6.36□□□□□ -1.39
PTPRK-215ENST00000498284 PFKLP17858 780 aa6.36□□□□□ -1.39
PTPRK-215ENST00000498284 POU3F2P20265 443 aaPredicted RBP6.36□□□□□ -1.39
PTPRK-215ENST00000498284 NEK4P51957 841 aa6.36□□□□□ -1.39
PTPRK-215ENST00000498284 EPHA5P54756 1037 aa6.36□□□□□ -1.39
PTPRK-215ENST00000498284 ZNF648Q5T619 568 aaPredicted RBP6.36□□□□□ -1.39
PTPRK-215ENST00000498284 ETV3LQ6ZN32 361 aa6.36□□□□□ -1.39
PTPRK-215ENST00000498284 EP400NLQ6ZTU2 488 aa6.36□□□□□ -1.39
PTPRK-215ENST00000498284 KCTD1Q719H9 257 aa6.36□□□□□ -1.39
PTPRK-215ENST00000498284 MIB1Q86YT6 1006 aa6.36□□□□□ -1.39
PTPRK-215ENST00000498284 IGDCC3Q8IVU1 814 aa6.36□□□□□ -1.39
PTPRK-215ENST00000498284 FAM126BQ8IXS8 530 aa6.36□□□□□ -1.39
PTPRK-215ENST00000498284 NLGN4XQ8N0W4 816 aa6.36□□□□□ -1.39
PTPRK-215ENST00000498284 CLEC4DQ8WXI8 215 aa6.36□□□□□ -1.39
PTPRK-215ENST00000498284 CPA5Q8WXQ8 436 aa6.36□□□□□ -1.39
PTPRK-215ENST00000498284 SLC38A3Q99624 504 aa6.36□□□□□ -1.39
PTPRK-215ENST00000498284 SRPK3Q9UPE1 567 aa6.36□□□□□ -1.39
PTPRK-215ENST00000498284 TELO2Q9Y4R8 837 aa6.36□□□□□ -1.39
PTPRK-215ENST00000498284 SBNO2Q9Y2G9 1366 aa6.35□□□□□ -1.39
PTPRK-215ENST00000498284 MAN2B1O00754 1011 aa6.35□□□□□ -1.39
PTPRK-215ENST00000498284 KPNA6O60684 536 aa6.35□□□□□ -1.39
PTPRK-215ENST00000498284 LTFP02788 710 aa6.35□□□□□ -1.39
PTPRK-215ENST00000498284 ATF2P15336 505 aa6.35□□□□□ -1.39
PTPRK-215ENST00000498284 GLDCP23378 1020 aa6.35□□□□□ -1.39
PTPRK-215ENST00000498284 MASP1P48740 699 aa6.35□□□□□ -1.39
PTPRK-215ENST00000498284 MECP2P51608 486 aaKnown RBP6.35□□□□□ -1.39
PTPRK-215ENST00000498284 GRIN1Q05586 938 aa6.35□□□□□ -1.39
PTPRK-215ENST00000498284 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.35□□□□□ -1.39
PTPRK-215ENST00000498284 PPM1KQ8N3J5 372 aa6.35□□□□□ -1.39
PTPRK-215ENST00000498284 C2orf69Q8N8R5 385 aa6.35□□□□□ -1.39
PTPRK-215ENST00000498284 TTLL11Q8NHH1 800 aa6.35□□□□□ -1.39
PTPRK-215ENST00000498284 PPP1R16BQ96T49 567 aa6.35□□□□□ -1.39
PTPRK-215ENST00000498284 YIPF4Q9BSR8 244 aa6.35□□□□□ -1.39
PTPRK-215ENST00000498284 MTFR1LQ9H019 292 aa6.35□□□□□ -1.39
PTPRK-215ENST00000498284 GSG1L2A8MUP6 293 aa6.34□□□□□ -1.39
PTPRK-215ENST00000498284 CBX4O00257 560 aa6.34□□□□□ -1.39
PTPRK-215ENST00000498284 TRAF5O00463 557 aa6.34□□□□□ -1.39
PTPRK-215ENST00000498284 NFIBO00712 420 aa6.34□□□□□ -1.39
PTPRK-215ENST00000498284 KCNK3O14649 394 aa6.34□□□□□ -1.39
PTPRK-215ENST00000498284 BUB1BO60566 1050 aaPredicted RBP6.34□□□□□ -1.39
PTPRK-215ENST00000498284 PDE8AO60658 829 aa6.34□□□□□ -1.39
PTPRK-215ENST00000498284 KRT1P04264 644 aa6.34□□□□□ -1.39
PTPRK-215ENST00000498284 MED14OSP0DP75 135 aa6.34□□□□□ -1.39
PTPRK-215ENST00000498284 IGFBP6P24592 240 aaPredicted RBP6.34□□□□□ -1.39
PTPRK-215ENST00000498284 MC3RP41968 323 aa6.34□□□□□ -1.39
PTPRK-215ENST00000498284 STAT5AP42229 794 aa6.34□□□□□ -1.39
PTPRK-215ENST00000498284 CACNB2Q08289 660 aaPredicted RBP6.34□□□□□ -1.39
PTPRK-215ENST00000498284 PCBP1Q15365 356 aaKnown RBP eCLIP6.34□□□□□ -1.39
PTPRK-215ENST00000498284 FIGNQ5HY92 759 aa6.34□□□□□ -1.39
PTPRK-215ENST00000498284 HHIPL2Q6UWX4 724 aa6.34□□□□□ -1.39
PTPRK-215ENST00000498284 ATG14Q6ZNE5 492 aa6.34□□□□□ -1.39
PTPRK-215ENST00000498284 ZNF662Q6ZS27 426 aa6.34□□□□□ -1.39
PTPRK-215ENST00000498284 AHI1Q8N157 1196 aa6.34□□□□□ -1.39
PTPRK-215ENST00000498284 CHST14Q8NCH0 376 aa6.34□□□□□ -1.39
PTPRK-215ENST00000498284 TOE1Q96GM8 510 aaKnown RBP6.34□□□□□ -1.39
PTPRK-215ENST00000498284 PDGFDQ9GZP0 370 aaPredicted RBP6.34□□□□□ -1.39
PTPRK-215ENST00000498284 CABP5Q9NP86 173 aa6.34□□□□□ -1.39
PTPRK-215ENST00000498284 DTLQ9NZJ0 730 aa6.34□□□□□ -1.39
PTPRK-215ENST00000498284 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.34□□□□□ -1.39
PTPRK-215ENST00000498284 PRKAB1Q9Y478 270 aa6.34□□□□□ -1.39
PTPRK-215ENST00000498284 ATP23Q9Y6H3 246 aa6.34□□□□□ -1.39
PTPRK-215ENST00000498284 SLC12A8A0AV02 714 aa6.33□□□□□ -1.4
PTPRK-215ENST00000498284 C8BP07358 591 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms