RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 COL6A3P12111 3177 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 SIP14410 1827 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 SPDYE3A6NKU9 549 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 H3BRB1 525 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 hCG_1984214I3L0E3 225 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 LGALS2P05162 132 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 CPA1P15085 419 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 PBX2P40425 430 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 RCAN1P53805 252 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 NAPAP54920 295 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 RBL2Q08999 1139 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 PTK7Q13308 1070 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 RAB30Q15771 203 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 WWC2Q6AWC2 1192 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 BLOC1S2Q6QNY1 142 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 METTL7BQ6UX53 244 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 CYFIP1Q7L576 1253 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 ZNF713Q8N859 430 aaPredicted RBP9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 AFAP1L1Q8TED9 768 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 MYLIPQ8WY64 445 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 DHX38Q92620 1227 aaKnown RBP9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 JAKMIP1Q96N16 626 aaKnown RBP9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 SENP7Q9BQF6 1050 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 C16orf70Q9BSU1 422 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 FTOQ9C0B1 505 aaKnown RBP eCLIP9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 ZNF576Q9H609 170 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 TUT1Q9H6E5 874 aaKnown RBP9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 BCAS3Q9H6U6 928 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 EHMT1Q9H9B1 1298 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 MSRAQ9UJ68 235 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 PCDHA6Q9UN73 950 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 PCDHA8Q9Y5H6 950 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 SNX14Q9Y5W7 946 aa9.73□□□□□ -0.85
HMGXB4-207ENST00000498212 LOXHD1Q8IVV2 1947 aa9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 PARNO95453 639 aaKnown RBP9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 CKBP12277 381 aa9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 FOSL2P15408 326 aa9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 SELPP16109 830 aa9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 ATP2A2P16615 1042 aaKnown RBP9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 CDC27P30260 824 aa9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 METAP2P50579 478 aaKnown RBP eCLIP9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 ZNF200P98182 395 aaPredicted RBP9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 APOBRQ0VD83 1088 aa9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 FUT2Q10981 343 aa9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 GRIN2CQ14957 1233 aa9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 PPP1R18Q6NYC8 613 aa9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 Q6ZUG5 572 aa9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 LRRC8DQ7L1W4 858 aa9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 GIMAP8Q8ND71 665 aaPredicted RBP9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 BRF1Q92994 677 aa9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 GPRASP2Q96D09 838 aa9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 CDHR1Q96JP9 859 aa9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 GPR20Q99678 358 aa9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 USP26Q9BXU7 913 aa9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 FAM217BQ9NTX9 383 aaPredicted RBP9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 V9GY48 417 aaPredicted RBP9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 MYH9P35579 1960 aaKnown RBP9.72□□□□□ -0.85
HMGXB4-207ENST00000498212 CCDC196A0A1B0GTZ2 297 aa9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 C17orf102A2RUQ5 167 aa9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 STXBP3O00186 592 aa9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 EPB41L2O43491 1005 aaKnown RBP9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 ITGB5P18084 799 aa9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 RPS6KB1P23443 525 aa9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 PSMA5P28066 241 aa9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 ADCY7P51828 1080 aa9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 RABGGTBP53611 331 aa9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 SP4Q02446 784 aa9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 MTMR1Q13613 665 aa9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 HIC1Q14526 733 aa9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 TYW1BQ6NUM6 668 aa9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 TEX2Q8IWB9 1127 aa9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 MAFAQ8NHW3 353 aaPredicted RBP9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 PHF12Q96QT6 1004 aa9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 SLC9A7Q96T83 725 aa9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 NKX2-4Q9H2Z4 354 aa9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 SLC28A3Q9HAS3 691 aa9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 RIC8AQ9NPQ8 531 aa9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 BARHL2Q9NY43 387 aa9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 ZNF215Q9UL58 517 aaPredicted RBP9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 PCDHA11Q9Y5I1 949 aa9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 UBIAD1Q9Y5Z9 338 aa9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 NID2Q14112 1375 aa9.71□□□□□ -0.86
HMGXB4-207ENST00000498212 MYO9BQ13459 2157 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 SMCO2A6NFE2 343 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 SPDYE4A6NLX3 237 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 MAFGO15525 162 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 ATP9AO75110 1047 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 BAIAP3O94812 1187 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 FOSP01100 380 aaPredicted RBP9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 SMIM10L2AP0DMW4 78 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 SMIM10L2BP0DMW5 78 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 KCNA2P16389 499 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 HOXC8P31273 242 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 ADD1P35611 737 aaKnown RBP9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 TCF7P36402 384 aaPredicted RBP9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 GPNMBQ14956 572 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 PFKFB3Q16875 520 aaPredicted RBP9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 TRIM71Q2Q1W2 868 aaKnown RBP9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 ZNF618Q5T7W0 954 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 UTP14CQ5TAP6 766 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms