RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 PTPN11Q06124 597 aaPredicted RBP19.06■□□□□ 0.64
ABCF3-218ENST00000498136 MFSD10Q14728 455 aa19.06■□□□□ 0.64
ABCF3-218ENST00000498136 ME3Q16798 604 aa19.06■□□□□ 0.64
ABCF3-218ENST00000498136 KIAA0753Q2KHM9 967 aa19.06■□□□□ 0.64
ABCF3-218ENST00000498136 C7orf31Q8N865 590 aa19.06■□□□□ 0.64
ABCF3-218ENST00000498136 NECAB1Q8N987 351 aa19.06■□□□□ 0.64
ABCF3-218ENST00000498136 ADAMTS3O15072 1205 aa19.05■□□□□ 0.64
ABCF3-218ENST00000498136 DTNBO60941 627 aa19.05■□□□□ 0.64
ABCF3-218ENST00000498136 ATP9AO75110 1047 aa19.05■□□□□ 0.64
ABCF3-218ENST00000498136 LARGE1O95461 756 aa19.05■□□□□ 0.64
ABCF3-218ENST00000498136 KCNA2P16389 499 aa19.05■□□□□ 0.64
ABCF3-218ENST00000498136 CEP55Q53EZ4 464 aa19.05■□□□□ 0.64
ABCF3-218ENST00000498136 TMEM199Q8N511 208 aa19.05■□□□□ 0.64
ABCF3-218ENST00000498136 CYP2W1Q8TAV3 490 aa19.05■□□□□ 0.64
ABCF3-218ENST00000498136 AIFM3Q96NN9 605 aa19.05■□□□□ 0.64
ABCF3-218ENST00000498136 TRIOBPQ9H2D6 2365 aa19.05■□□□□ 0.64
ABCF3-218ENST00000498136 STK36Q9NRP7 1315 aa19.04■□□□□ 0.64
ABCF3-218ENST00000498136 F2P00734 622 aa19.04■□□□□ 0.64
ABCF3-218ENST00000498136 LGALS2P05162 132 aa19.04■□□□□ 0.64
ABCF3-218ENST00000498136 CYP2C9P11712 490 aa19.04■□□□□ 0.64
ABCF3-218ENST00000498136 HOXD8P13378 290 aaPredicted RBP19.04■□□□□ 0.64
ABCF3-218ENST00000498136 XBP1P17861 261 aa19.04■□□□□ 0.64
ABCF3-218ENST00000498136 CYP2C18P33260 490 aa19.04■□□□□ 0.64
ABCF3-218ENST00000498136 UTP14CQ5TAP6 766 aaKnown RBP19.04■□□□□ 0.64
ABCF3-218ENST00000498136 MFSD5Q6N075 450 aa19.04■□□□□ 0.64
ABCF3-218ENST00000498136 GTF3C6Q969F1 213 aa19.04■□□□□ 0.64
ABCF3-218ENST00000498136 GPR20Q99678 358 aa19.04■□□□□ 0.64
ABCF3-218ENST00000498136 KCNH7Q9NS40 1196 aa19.04■□□□□ 0.64
ABCF3-218ENST00000498136 ARP10275 920 aa19.03■□□□□ 0.64
ABCF3-218ENST00000498136 CCL23P55773 120 aa19.03■□□□□ 0.64
ABCF3-218ENST00000498136 PPIGQ13427 754 aaKnown RBP eCLIP19.03■□□□□ 0.641e-6■■■□□ 17.3
ABCF3-218ENST00000498136 PTGISQ16647 500 aa19.03■□□□□ 0.64
ABCF3-218ENST00000498136 PLA2G4DQ86XP0 818 aa19.03■□□□□ 0.64
ABCF3-218ENST00000498136 SDF4Q9BRK5 362 aa19.03■□□□□ 0.64
ABCF3-218ENST00000498136 NOC4LQ9BVI4 516 aaKnown RBP19.03■□□□□ 0.64
ABCF3-218ENST00000498136 ORC3Q9UBD5 711 aaPredicted RBP19.03■□□□□ 0.64
ABCF3-218ENST00000498136 HDAC6Q9UBN7 1215 aa19.03■□□□□ 0.64
ABCF3-218ENST00000498136 PCDHA4Q9UN74 947 aa19.03■□□□□ 0.64
ABCF3-218ENST00000498136 RANBP2P49792 3224 aaKnown RBP19.03■□□□□ 0.64
ABCF3-218ENST00000498136 UMODL1Q5DID0 1318 aa19.02■□□□□ 0.64
ABCF3-218ENST00000498136 H3BRB1 525 aa19.02■□□□□ 0.64
ABCF3-218ENST00000498136 HAS3O00219 553 aa19.02■□□□□ 0.64
ABCF3-218ENST00000498136 CSF2RAP15509 400 aa19.02■□□□□ 0.64
ABCF3-218ENST00000498136 FXR1P51114 621 aaKnown RBP eCLIP19.02■□□□□ 0.64
ABCF3-218ENST00000498136 GDF6Q6KF10 455 aaPredicted RBP19.02■□□□□ 0.64
ABCF3-218ENST00000498136 BLIDQ8IZY5 108 aa19.02■□□□□ 0.64
ABCF3-218ENST00000498136 WASF1Q92558 559 aa19.02■□□□□ 0.64
ABCF3-218ENST00000498136 C16orf70Q9BSU1 422 aa19.02■□□□□ 0.64
ABCF3-218ENST00000498136 TUT1Q9H6E5 874 aaKnown RBP19.02■□□□□ 0.64
ABCF3-218ENST00000498136 SLC9A2Q9UBY0 812 aa19.02■□□□□ 0.64
ABCF3-218ENST00000498136 GTF2IRD1Q9UHL9 959 aa19.02■□□□□ 0.64
ABCF3-218ENST00000498136 ZNF215Q9UL58 517 aaPredicted RBP19.02■□□□□ 0.64
ABCF3-218ENST00000498136 KCNJ14Q9UNX9 436 aa19.02■□□□□ 0.64
ABCF3-218ENST00000498136 TELO2Q9Y4R8 837 aa19.02■□□□□ 0.64
ABCF3-218ENST00000498136 FAM86B1E9PN63 330 aa19.01■□□□□ 0.63
ABCF3-218ENST00000498136 MEIS1O00470 390 aa19.01■□□□□ 0.63
ABCF3-218ENST00000498136 CTDNEP1O95476 244 aa19.01■□□□□ 0.63
ABCF3-218ENST00000498136 CYP3A4P08684 503 aa19.01■□□□□ 0.63
ABCF3-218ENST00000498136 FAM86B2P0C5J1 330 aa19.01■□□□□ 0.63
ABCF3-218ENST00000498136 TCF7P36402 384 aaPredicted RBP19.01■□□□□ 0.63
ABCF3-218ENST00000498136 SHHQ15465 462 aa19.01■□□□□ 0.63
ABCF3-218ENST00000498136 C9orf50Q5SZB4 431 aa19.01■□□□□ 0.63
ABCF3-218ENST00000498136 NIPA1Q7RTP0 329 aa19.01■□□□□ 0.63
ABCF3-218ENST00000498136 SESTD1Q86VW0 696 aa19.01■□□□□ 0.63
ABCF3-218ENST00000498136 TRIM50Q86XT4 487 aa19.01■□□□□ 0.63
ABCF3-218ENST00000498136 SEPT1Q8WYJ6 367 aa19.01■□□□□ 0.63
ABCF3-218ENST00000498136 AGO4Q9HCK5 861 aaKnown RBP19.01■□□□□ 0.63
ABCF3-218ENST00000498136 JPH1Q9HDC5 661 aaPredicted RBP19.01■□□□□ 0.63
ABCF3-218ENST00000498136 LIMCH1Q9UPQ0 1083 aa19.01■□□□□ 0.63
ABCF3-218ENST00000498136 DDX39AO00148 427 aaKnown RBP19■□□□□ 0.63
ABCF3-218ENST00000498136 RBM25P49756 843 aaKnown RBP19■□□□□ 0.63
ABCF3-218ENST00000498136 EPHB4P54760 987 aa19■□□□□ 0.63
ABCF3-218ENST00000498136 GALNT17Q6IS24 598 aa19■□□□□ 0.63
ABCF3-218ENST00000498136 FAM177A1Q8N128 213 aaPredicted RBP19■□□□□ 0.63
ABCF3-218ENST00000498136 CCDC155Q8N6L0 562 aa19■□□□□ 0.63
ABCF3-218ENST00000498136 RETREG2Q8NC44 543 aa19■□□□□ 0.63
ABCF3-218ENST00000498136 UIMC1Q96RL1 719 aa19■□□□□ 0.63
ABCF3-218ENST00000498136 GTF3C3Q9Y5Q9 886 aa19■□□□□ 0.63
ABCF3-218ENST00000498136 NFASCO94856 1347 aa19■□□□□ 0.63
ABCF3-218ENST00000498136 TRIP12Q14669 1992 aaPredicted RBP18.99■□□□□ 0.63
ABCF3-218ENST00000498136 C17orf102A2RUQ5 167 aa18.99■□□□□ 0.63
ABCF3-218ENST00000498136 ACRP10323 421 aa18.99■□□□□ 0.63
ABCF3-218ENST00000498136 SETQ01105 290 aaPredicted RBP18.99■□□□□ 0.63
ABCF3-218ENST00000498136 BFSP2Q13515 415 aa18.99■□□□□ 0.63
ABCF3-218ENST00000498136 PRR16Q569H4 304 aa18.99■□□□□ 0.63
ABCF3-218ENST00000498136 DAGLBQ8NCG7 672 aa18.99■□□□□ 0.63
ABCF3-218ENST00000498136 NSUN7Q8NE18 718 aaKnown RBP18.99■□□□□ 0.63
ABCF3-218ENST00000498136 TBCKQ8TEA7 893 aa18.99■□□□□ 0.63
ABCF3-218ENST00000498136 CRYGNQ8WXF5 182 aa18.99■□□□□ 0.63
ABCF3-218ENST00000498136 GLG1Q92896 1179 aa18.99■□□□□ 0.63
ABCF3-218ENST00000498136 SCLYQ96I15 445 aa18.99■□□□□ 0.63
ABCF3-218ENST00000498136 RNPC3Q96LT9 517 aaKnown RBP18.99■□□□□ 0.63
ABCF3-218ENST00000498136 KIF2CQ99661 725 aa18.99■□□□□ 0.63
ABCF3-218ENST00000498136 PHF20Q9BVI0 1012 aa18.99■□□□□ 0.63
ABCF3-218ENST00000498136 KAT6AQ92794 2004 aa18.98■□□□□ 0.63
ABCF3-218ENST00000498136 GSTTP1A0A1W2PQM5 241 aa18.98■□□□□ 0.63
ABCF3-218ENST00000498136 SOX1O00570 391 aaPredicted RBP18.98■□□□□ 0.63
ABCF3-218ENST00000498136 SMIM10L2AP0DMW4 78 aa18.98■□□□□ 0.63
ABCF3-218ENST00000498136 SMIM10L2BP0DMW5 78 aa18.98■□□□□ 0.63
ABCF3-218ENST00000498136 MARK3P27448 753 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms