RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 PARNO95453 639 aaKnown RBP21.41■■□□□ 1.02
PRKCB-209ENST00000498058 SMIM10L2AP0DMW4 78 aa21.41■■□□□ 1.02
PRKCB-209ENST00000498058 SMIM10L2BP0DMW5 78 aa21.41■■□□□ 1.02
PRKCB-209ENST00000498058 BMP1P13497 986 aa21.41■■□□□ 1.02
PRKCB-209ENST00000498058 TRAF1Q13077 416 aa21.41■■□□□ 1.02
PRKCB-209ENST00000498058 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.41■■□□□ 1.02
PRKCB-209ENST00000498058 CYFIP1Q7L576 1253 aa21.41■■□□□ 1.02
PRKCB-209ENST00000498058 CMTR1Q8N1G2 835 aaKnown RBP21.41■■□□□ 1.02
PRKCB-209ENST00000498058 SRBD1Q8N5C6 995 aaKnown RBP21.41■■□□□ 1.02
PRKCB-209ENST00000498058 SPZ1Q9BXG8 430 aa21.41■■□□□ 1.02
PRKCB-209ENST00000498058 RNPEPQ9H4A4 650 aa21.41■■□□□ 1.02
PRKCB-209ENST00000498058 NCOR1O75376 2440 aa21.4■■□□□ 1.02
PRKCB-209ENST00000498058 ABHD14A-ACY1A0A1B0GW23 586 aa21.4■■□□□ 1.02
PRKCB-209ENST00000498058 H3BRB1 525 aa21.4■■□□□ 1.02
PRKCB-209ENST00000498058 SH2B2O14492 632 aaPredicted RBP21.4■■□□□ 1.02
PRKCB-209ENST00000498058 TREHO43280 583 aa21.4■■□□□ 1.02
PRKCB-209ENST00000498058 PRC1O43663 620 aa21.4■■□□□ 1.02
PRKCB-209ENST00000498058 GJB5O95377 273 aa21.4■■□□□ 1.02
PRKCB-209ENST00000498058 RXRAP19793 462 aa21.4■■□□□ 1.02
PRKCB-209ENST00000498058 KCNQ1P51787 676 aa21.4■■□□□ 1.02
PRKCB-209ENST00000498058 TRIM50Q86XT4 487 aa21.4■■□□□ 1.02
PRKCB-209ENST00000498058 RAB11FIP4Q86YS3 637 aa21.4■■□□□ 1.02
PRKCB-209ENST00000498058 DBF4BQ8NFT6 615 aa21.4■■□□□ 1.02
PRKCB-209ENST00000498058 MAP3K14Q99558 947 aa21.4■■□□□ 1.02
PRKCB-209ENST00000498058 GPR20Q99678 358 aa21.4■■□□□ 1.02
PRKCB-209ENST00000498058 TUT1Q9H6E5 874 aaKnown RBP21.4■■□□□ 1.02
PRKCB-209ENST00000498058 C17orf102A2RUQ5 167 aa21.39■■□□□ 1.01
PRKCB-209ENST00000498058 LGR5O75473 907 aa21.39■■□□□ 1.01
PRKCB-209ENST00000498058 DDAH1O94760 285 aa21.39■■□□□ 1.01
PRKCB-209ENST00000498058 THPOP40225 353 aa21.39■■□□□ 1.01
PRKCB-209ENST00000498058 FAM117BQ6P1L5 589 aa21.39■■□□□ 1.01
PRKCB-209ENST00000498058 SKAP1Q86WV1 359 aa21.39■■□□□ 1.01
PRKCB-209ENST00000498058 ATP6V0A1Q93050 837 aa21.39■■□□□ 1.01
PRKCB-209ENST00000498058 UHRF1Q96T88 793 aaPredicted RBP21.39■■□□□ 1.01
PRKCB-209ENST00000498058 SLC27A2O14975 620 aa21.38■■□□□ 1.01
PRKCB-209ENST00000498058 GTPBP6O43824 516 aaPredicted RBP21.38■■□□□ 1.01
PRKCB-209ENST00000498058 IKBKEQ14164 716 aa21.38■■□□□ 1.01
PRKCB-209ENST00000498058 SKIV2LQ15477 1246 aaKnown RBP21.38■■□□□ 1.01
PRKCB-209ENST00000498058 METTL7BQ6UX53 244 aa21.38■■□□□ 1.01
PRKCB-209ENST00000498058 CTCFLQ8NI51 663 aaPredicted RBP21.38■■□□□ 1.01
PRKCB-209ENST00000498058 GDPD5Q8WTR4 605 aa21.38■■□□□ 1.01
PRKCB-209ENST00000498058 RRP36Q96EU6 259 aaKnown RBP21.38■■□□□ 1.01
PRKCB-209ENST00000498058 RAD9AQ99638 391 aa21.38■■□□□ 1.01
PRKCB-209ENST00000498058 ZBED2Q9BTP6 218 aa21.38■■□□□ 1.01
PRKCB-209ENST00000498058 SIP14410 1827 aa21.38■■□□□ 1.01
PRKCB-209ENST00000498058 hCG_1642624A0A1W2PR95 340 aa21.37■■□□□ 1.01
PRKCB-209ENST00000498058 LINC01553A4QN01 128 aa21.37■■□□□ 1.01
PRKCB-209ENST00000498058 RSPH10B2B2RC85 870 aa21.37■■□□□ 1.01
PRKCB-209ENST00000498058 PIK3CDO00329 1044 aa21.37■■□□□ 1.01
PRKCB-209ENST00000498058 FIBPO43427 364 aa21.37■■□□□ 1.01
PRKCB-209ENST00000498058 STAM2O75886 525 aa21.37■■□□□ 1.01
PRKCB-209ENST00000498058 RSPH10BP0C881 870 aa21.37■■□□□ 1.01
PRKCB-209ENST00000498058 SMARCA1P28370 1054 aa21.37■■□□□ 1.01
PRKCB-209ENST00000498058 GNPTABQ3T906 1256 aa21.37■■□□□ 1.01
PRKCB-209ENST00000498058 PCNX4Q63HM2 1172 aa21.37■■□□□ 1.01
PRKCB-209ENST00000498058 SMARCC2Q8TAQ2 1214 aa21.37■■□□□ 1.01
PRKCB-209ENST00000498058 ESYT1Q9BSJ8 1104 aa21.37■■□□□ 1.01
PRKCB-209ENST00000498058 LRRC2Q9BYS8 371 aa21.37■■□□□ 1.01
PRKCB-209ENST00000498058 SUGCTQ9HAC7 445 aa21.37■■□□□ 1.01
PRKCB-209ENST00000498058 SETD4Q9NVD3 440 aa21.37■■□□□ 1.01
PRKCB-209ENST00000498058 MTUS1Q9ULD2 1270 aa21.37■■□□□ 1.01
PRKCB-209ENST00000498058 NOP56O00567 594 aaKnown RBP21.36■■□□□ 1.01
PRKCB-209ENST00000498058 ATP9AO75110 1047 aa21.36■■□□□ 1.01
PRKCB-209ENST00000498058 ERVK-21P61565 698 aa21.36■■□□□ 1.01
PRKCB-209ENST00000498058 ADAM17P78536 824 aa21.36■■□□□ 1.01
PRKCB-209ENST00000498058 NEDD9Q14511 834 aa21.36■■□□□ 1.01
PRKCB-209ENST00000498058 NECTIN1Q15223 517 aa21.36■■□□□ 1.01
PRKCB-209ENST00000498058 PLEKHG4Q58EX7 1191 aa21.36■■□□□ 1.01
PRKCB-209ENST00000498058 UTP14CQ5TAP6 766 aaKnown RBP21.36■■□□□ 1.01
PRKCB-209ENST00000498058 CASC1Q6TDU7 716 aa21.36■■□□□ 1.01
PRKCB-209ENST00000498058 MTA3Q9BTC8 594 aa21.36■■□□□ 1.01
PRKCB-209ENST00000498058 USP26Q9BXU7 913 aa21.36■■□□□ 1.01
PRKCB-209ENST00000498058 TSPYL2Q9H2G4 693 aaPredicted RBP21.36■■□□□ 1.01
PRKCB-209ENST00000498058 BRWD1Q9NSI6 2320 aa21.36■■□□□ 1.01
PRKCB-209ENST00000498058 CTSHP09668 335 aa21.35■■□□□ 1.01
PRKCB-209ENST00000498058 KIF5BP33176 963 aa21.35■■□□□ 1.01
PRKCB-209ENST00000498058 MCM5P33992 734 aa21.35■■□□□ 1.01
PRKCB-209ENST00000498058 SP4Q02446 784 aa21.35■■□□□ 1.01
PRKCB-209ENST00000498058 CREB3L3Q68CJ9 461 aa21.35■■□□□ 1.01
PRKCB-209ENST00000498058 KAT6AQ92794 2004 aa21.34■■□□□ 1.01
PRKCB-209ENST00000498058 EFCAB14O75071 495 aa21.34■■□□□ 1.01
PRKCB-209ENST00000498058 UBE2SQ16763 222 aa21.34■■□□□ 1.01
PRKCB-209ENST00000498058 NFXL1Q6ZNB6 911 aa21.34■■□□□ 1.01
PRKCB-209ENST00000498058 TMEM87BQ96K49 555 aa21.34■■□□□ 1.01
PRKCB-209ENST00000498058 SENP7Q9BQF6 1050 aa21.34■■□□□ 1.01
PRKCB-209ENST00000498058 EMSYQ7Z589 1322 aa21.33■■□□□ 1.01
PRKCB-209ENST00000498058 BDP1A6H8Y1 2624 aa21.33■■□□□ 1.01
PRKCB-209ENST00000498058 CCDC69A6NI79 296 aa21.33■■□□□ 1.01
PRKCB-209ENST00000498058 KCNA2P16389 499 aa21.33■■□□□ 1.01
PRKCB-209ENST00000498058 ITGB5P18084 799 aa21.33■■□□□ 1.01
PRKCB-209ENST00000498058 LIFRP42702 1097 aa21.33■■□□□ 1.01
PRKCB-209ENST00000498058 HTRA4P83105 476 aaPredicted RBP21.33■■□□□ 1.01
PRKCB-209ENST00000498058 MYOCDQ8IZQ8 938 aa21.33■■□□□ 1.01
PRKCB-209ENST00000498058 CCDC82Q8N4S0 544 aa21.33■■□□□ 1.01
PRKCB-209ENST00000498058 LMBR1Q8WVP7 490 aa21.33■■□□□ 1.01
PRKCB-209ENST00000498058 CUL5Q93034 780 aa21.33■■□□□ 1.01
PRKCB-209ENST00000498058 TGS1Q96RS0 853 aaKnown RBP21.33■■□□□ 1.01
PRKCB-209ENST00000498058 LZTS2Q9BRK4 669 aa21.33■■□□□ 1.01
PRKCB-209ENST00000498058 C17orf80Q9BSJ5 609 aa21.33■■□□□ 1.01
PRKCB-209ENST00000498058 SEC63Q9UGP8 760 aaKnown RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms