RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 TEKT3Q9BXF9 490 aa19.89■□□□□ 0.77
CHRNA4-206ENST00000498043 UNC45AQ9H3U1 944 aa19.89■□□□□ 0.77
CHRNA4-206ENST00000498043 CYP39A1Q9NYL5 469 aa19.89■□□□□ 0.77
CHRNA4-206ENST00000498043 RGL1Q9NZL6 768 aa19.89■□□□□ 0.77
CHRNA4-206ENST00000498043 BTBD7Q9P203 1132 aa19.89■□□□□ 0.77
CHRNA4-206ENST00000498043 NRBP1Q9UHY1 535 aa19.89■□□□□ 0.77
CHRNA4-206ENST00000498043 UBIAD1Q9Y5Z9 338 aa19.89■□□□□ 0.77
CHRNA4-206ENST00000498043 BCRP11274 1271 aa19.88■□□□□ 0.77
CHRNA4-206ENST00000498043 IDEP14735 1019 aa19.88■□□□□ 0.77
CHRNA4-206ENST00000498043 ZNF18P17022 549 aa19.88■□□□□ 0.77
CHRNA4-206ENST00000498043 MTMR1Q13613 665 aa19.88■□□□□ 0.77
CHRNA4-206ENST00000498043 LDLRAD1Q5T700 205 aa19.88■□□□□ 0.77
CHRNA4-206ENST00000498043 ZSCAN30Q86W11 494 aa19.88■□□□□ 0.77
CHRNA4-206ENST00000498043 ADSSL1Q8N142 457 aa19.88■□□□□ 0.77
CHRNA4-206ENST00000498043 LRRC27Q9C0I9 530 aa19.88■□□□□ 0.77
CHRNA4-206ENST00000498043 ASCC2Q9H1I8 757 aaPredicted RBP19.88■□□□□ 0.77
CHRNA4-206ENST00000498043 AGTPBP1Q9UPW5 1226 aa19.88■□□□□ 0.77
CHRNA4-206ENST00000498043 STK24Q9Y6E0 443 aa19.88■□□□□ 0.77
CHRNA4-206ENST00000498043 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.88■□□□□ 0.77
CHRNA4-206ENST00000498043 GJA5P36382 358 aa19.88■□□□□ 0.77
CHRNA4-206ENST00000498043 PSMC6P62333 389 aa19.88■□□□□ 0.77
CHRNA4-206ENST00000498043 UNC13DQ70J99 1090 aa19.88■□□□□ 0.77
CHRNA4-206ENST00000498043 NIPA1Q7RTP0 329 aa19.88■□□□□ 0.77
CHRNA4-206ENST00000498043 GPBP1Q86WP2 473 aa19.88■□□□□ 0.77
CHRNA4-206ENST00000498043 PAGR1Q9BTK6 254 aa19.88■□□□□ 0.77
CHRNA4-206ENST00000498043 RRAGCQ9HB90 399 aa19.88■□□□□ 0.77
CHRNA4-206ENST00000498043 RWDD2AQ9UIY3 292 aa19.88■□□□□ 0.77
CHRNA4-206ENST00000498043 PTGS1P23219 599 aa19.87■□□□□ 0.77
CHRNA4-206ENST00000498043 STK4Q13043 487 aa19.87■□□□□ 0.77
CHRNA4-206ENST00000498043 SEMA3FQ13275 785 aa19.87■□□□□ 0.77
CHRNA4-206ENST00000498043 JADE2Q9NQC1 790 aa19.87■□□□□ 0.77
CHRNA4-206ENST00000498043 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.87■□□□□ 0.77
CHRNA4-206ENST00000498043 TESPA1A2RU30 521 aaPredicted RBP19.87■□□□□ 0.77
CHRNA4-206ENST00000498043 TRIM49BA6NDI0 452 aa19.87■□□□□ 0.77
CHRNA4-206ENST00000498043 CDK11BP21127 795 aaKnown RBP19.87■□□□□ 0.77
CHRNA4-206ENST00000498043 UBASH3AP57075 661 aa19.87■□□□□ 0.77
CHRNA4-206ENST00000498043 PABPC4Q13310 644 aaKnown RBP eCLIP19.87■□□□□ 0.77
CHRNA4-206ENST00000498043 STIM1Q13586 685 aa19.87■□□□□ 0.77
CHRNA4-206ENST00000498043 MOGSQ13724 837 aa19.87■□□□□ 0.77
CHRNA4-206ENST00000498043 CTTNQ14247 550 aaKnown RBP19.87■□□□□ 0.77
CHRNA4-206ENST00000498043 TPD52L1Q16890 204 aaPredicted RBP19.87■□□□□ 0.77
CHRNA4-206ENST00000498043 CCDC144BQ3MJ40 725 aa19.87■□□□□ 0.77
CHRNA4-206ENST00000498043 CNNM4Q6P4Q7 775 aa19.87■□□□□ 0.77
CHRNA4-206ENST00000498043 MB21D1Q8N884 522 aa19.87■□□□□ 0.77
CHRNA4-206ENST00000498043 DYDC2Q96IM9 177 aa19.87■□□□□ 0.77
CHRNA4-206ENST00000498043 RIT2Q99578 217 aa19.87■□□□□ 0.77
CHRNA4-206ENST00000498043 POLR3CQ9BUI4 534 aaPredicted RBP19.87■□□□□ 0.77
CHRNA4-206ENST00000498043 AGO4Q9HCK5 861 aaKnown RBP19.87■□□□□ 0.77
CHRNA4-206ENST00000498043 ZKSCAN5Q9Y2L8 839 aa19.87■□□□□ 0.77
CHRNA4-206ENST00000498043 PVALEFA0A1B0GWK0 134 aa19.86■□□□□ 0.77
CHRNA4-206ENST00000498043 SLC12A3P55017 1021 aa19.86■□□□□ 0.77
CHRNA4-206ENST00000498043 HERVK_113P62684 666 aa19.86■□□□□ 0.77
CHRNA4-206ENST00000498043 RAD51AP2Q09MP3 1159 aa19.86■□□□□ 0.77
CHRNA4-206ENST00000498043 ITGB3BPQ13352 177 aaPredicted RBP19.86■□□□□ 0.77
CHRNA4-206ENST00000498043 CCDC186Q7Z3E2 898 aa19.86■□□□□ 0.77
CHRNA4-206ENST00000498043 KIAA0895Q8NCT3 520 aa19.86■□□□□ 0.77
CHRNA4-206ENST00000498043 DNAJC19Q96DA6 116 aa19.86■□□□□ 0.77
CHRNA4-206ENST00000498043 SLC10A4Q96EP9 437 aa19.86■□□□□ 0.77
CHRNA4-206ENST00000498043 SLC39A2Q9NP94 309 aa19.86■□□□□ 0.77
CHRNA4-206ENST00000498043 DNM3Q9UQ16 869 aa19.86■□□□□ 0.77
CHRNA4-206ENST00000498043 NPHP3-ACAD11A0A0J9YXS1 232 aa19.85■□□□□ 0.77
CHRNA4-206ENST00000498043 PSMA7O14818 248 aa19.85■□□□□ 0.77
CHRNA4-206ENST00000498043 CYP11B2P19099 503 aa19.85■□□□□ 0.77
CHRNA4-206ENST00000498043 CCND2P30279 289 aa19.85■□□□□ 0.77
CHRNA4-206ENST00000498043 CACNB1Q02641 598 aaPredicted RBP19.85■□□□□ 0.77
CHRNA4-206ENST00000498043 TPH2Q8IWU9 490 aa19.85■□□□□ 0.77
CHRNA4-206ENST00000498043 HSD17B14Q9BPX1 270 aa19.85■□□□□ 0.77
CHRNA4-206ENST00000498043 SPATC1LQ9H0A9 340 aa19.85■□□□□ 0.77
CHRNA4-206ENST00000498043 NR3C2P08235 984 aa19.85■□□□□ 0.77
CHRNA4-206ENST00000498043 MSNP26038 577 aaKnown RBP19.85■□□□□ 0.77
CHRNA4-206ENST00000498043 PMS1P54277 932 aaKnown RBP19.85■□□□□ 0.77
CHRNA4-206ENST00000498043 CDKAL1Q5VV42 579 aa19.85■□□□□ 0.77
CHRNA4-206ENST00000498043 B3GNT9Q6UX72 402 aa19.85■□□□□ 0.77
CHRNA4-206ENST00000498043 FILIP1Q7Z7B0 1213 aa19.85■□□□□ 0.77
CHRNA4-206ENST00000498043 CHST13Q8NET6 341 aa19.85■□□□□ 0.77
CHRNA4-206ENST00000498043 NSUN6Q8TEA1 469 aaKnown RBP19.85■□□□□ 0.77
CHRNA4-206ENST00000498043 TUFT1Q9NNX1 390 aa19.85■□□□□ 0.77
CHRNA4-206ENST00000498043 RRAGDQ9NQL2 400 aaPredicted RBP19.85■□□□□ 0.77
CHRNA4-206ENST00000498043 BMP2KQ9NSY1 1161 aaPredicted RBP19.85■□□□□ 0.77
CHRNA4-206ENST00000498043 CBFA2T2O43439 604 aa19.84■□□□□ 0.77
CHRNA4-206ENST00000498043 KRT18P05783 430 aaKnown RBP19.84■□□□□ 0.77
CHRNA4-206ENST00000498043 COASYQ13057 564 aa19.84■□□□□ 0.77
CHRNA4-206ENST00000498043 FASTKD5Q7L8L6 764 aaKnown RBP19.84■□□□□ 0.77
CHRNA4-206ENST00000498043 RIOX2Q8IUF8 465 aa19.84■□□□□ 0.77
CHRNA4-206ENST00000498043 ANKRD35Q8N283 1001 aa19.84■□□□□ 0.77
CHRNA4-206ENST00000498043 NAP1L5Q96NT1 182 aaPredicted RBP19.84■□□□□ 0.77
CHRNA4-206ENST00000498043 BHMT2Q9H2M3 363 aa19.84■□□□□ 0.77
CHRNA4-206ENST00000498043 KCNF1Q9H3M0 494 aa19.84■□□□□ 0.77
CHRNA4-206ENST00000498043 KIAA1217Q5T5P2 1943 aa19.84■□□□□ 0.77
CHRNA4-206ENST00000498043 DHX15O43143 795 aaKnown RBP19.83■□□□□ 0.77
CHRNA4-206ENST00000498043 SLITRK3O94933 977 aa19.83■□□□□ 0.77
CHRNA4-206ENST00000498043 SNAPC2Q13487 334 aa19.83■□□□□ 0.77
CHRNA4-206ENST00000498043 TMC6Q7Z403 805 aa19.83■□□□□ 0.77
CHRNA4-206ENST00000498043 NCAPG2Q86XI2 1143 aa19.83■□□□□ 0.77
CHRNA4-206ENST00000498043 PANK4Q9NVE7 773 aa19.83■□□□□ 0.77
CHRNA4-206ENST00000498043 CNMDO75829 334 aa19.83■□□□□ 0.76
CHRNA4-206ENST00000498043 MKRN3Q13064 507 aaKnown RBP19.83■□□□□ 0.76
CHRNA4-206ENST00000498043 PTPN21Q16825 1174 aa19.83■□□□□ 0.76
CHRNA4-206ENST00000498043 ARSHQ5FYA8 562 aa19.83■□□□□ 0.76
CHRNA4-206ENST00000498043 GPAT2Q6NUI2 795 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms