RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 PRR31Q5SQ13 230 aa5.25□□□□□ -1.57
VPS26A-208ENST00000497022 MCTP2Q6DN12 878 aa5.25□□□□□ -1.57
VPS26A-208ENST00000497022 ETV3LQ6ZN32 361 aa5.25□□□□□ -1.57
VPS26A-208ENST00000497022 MILR1Q7Z6M3 343 aa5.25□□□□□ -1.57
VPS26A-208ENST00000497022 DNERQ8NFT8 737 aa5.25□□□□□ -1.57
VPS26A-208ENST00000497022 CHAMP1Q96JM3 812 aa5.25□□□□□ -1.57
VPS26A-208ENST00000497022 SEMA4AQ9H3S1 761 aa5.25□□□□□ -1.57
VPS26A-208ENST00000497022 PPP4R1LQ9P1A2 415 aa5.25□□□□□ -1.57
VPS26A-208ENST00000497022 IQCA1LA6NCM1 817 aa5.24□□□□□ -1.57
VPS26A-208ENST00000497022 H7BY64 318 aa5.24□□□□□ -1.57
VPS26A-208ENST00000497022 MIB1Q86YT6 1006 aa5.24□□□□□ -1.57
VPS26A-208ENST00000497022 ST13P5Q8NFI4 369 aaPredicted RBP5.24□□□□□ -1.57
VPS26A-208ENST00000497022 TRIM55Q9BYV6 548 aa5.24□□□□□ -1.57
VPS26A-208ENST00000497022 COA3Q9Y2R0 106 aaPredicted RBP5.24□□□□□ -1.57
VPS26A-208ENST00000497022 B4GALT3O60512 393 aa5.23□□□□□ -1.57
VPS26A-208ENST00000497022 SELENOPP49908 381 aa5.23□□□□□ -1.57
VPS26A-208ENST00000497022 ZC3H18Q86VM9 953 aaKnown RBP5.23□□□□□ -1.57
VPS26A-208ENST00000497022 CIR1Q86X95 450 aaPredicted RBP5.23□□□□□ -1.57
VPS26A-208ENST00000497022 CKAP2LQ8IYA6 745 aa5.23□□□□□ -1.57
VPS26A-208ENST00000497022 FAM26EQ8N5C1 309 aa5.23□□□□□ -1.57
VPS26A-208ENST00000497022 AARSD1Q9BTE6 412 aaKnown RBP5.23□□□□□ -1.57
VPS26A-208ENST00000497022 ARHGEF4Q9NR80 690 aa5.23□□□□□ -1.57
VPS26A-208ENST00000497022 GPR27Q9NS67 375 aa5.23□□□□□ -1.57
VPS26A-208ENST00000497022 CLDND1Q9NY35 253 aa5.23□□□□□ -1.57
VPS26A-208ENST00000497022 NPEPPSL1A6NEC2 478 aa5.22□□□□□ -1.57
VPS26A-208ENST00000497022 HGSO14964 777 aaPredicted RBP5.22□□□□□ -1.57
VPS26A-208ENST00000497022 PRODHO43272 600 aa5.22□□□□□ -1.57
VPS26A-208ENST00000497022 AMHP03971 560 aa5.22□□□□□ -1.57
VPS26A-208ENST00000497022 FGFR1P11362 822 aa5.22□□□□□ -1.57
VPS26A-208ENST00000497022 ITGA1P56199 1179 aa5.22□□□□□ -1.57
VPS26A-208ENST00000497022 PURAQ00577 322 aaKnown RBP5.22□□□□□ -1.57
VPS26A-208ENST00000497022 KLF10Q13118 480 aa5.22□□□□□ -1.57
VPS26A-208ENST00000497022 CD300LDQ6UXZ3 194 aa5.22□□□□□ -1.57
VPS26A-208ENST00000497022 USP53Q70EK8 1073 aa5.22□□□□□ -1.57
VPS26A-208ENST00000497022 FAM126BQ8IXS8 530 aa5.22□□□□□ -1.57
VPS26A-208ENST00000497022 OSBP2Q969R2 916 aa5.22□□□□□ -1.57
VPS26A-208ENST00000497022 SYT3Q9BQG1 590 aa5.22□□□□□ -1.57
VPS26A-208ENST00000497022 TANGO6Q9C0B7 1094 aa5.22□□□□□ -1.57
VPS26A-208ENST00000497022 CDIP1Q9H305 208 aa5.22□□□□□ -1.57
VPS26A-208ENST00000497022 MSRB2Q9Y3D2 182 aa5.22□□□□□ -1.57
VPS26A-208ENST00000497022 TCAF1Q9Y4C2 921 aa5.22□□□□□ -1.57
VPS26A-208ENST00000497022 GPR42O15529 346 aa5.21□□□□□ -1.58
VPS26A-208ENST00000497022 MSCO60682 206 aa5.21□□□□□ -1.58
VPS26A-208ENST00000497022 TADA3O75528 432 aa5.21□□□□□ -1.58
VPS26A-208ENST00000497022 PABPC1P11940 636 aaKnown RBP5.21□□□□□ -1.58
VPS26A-208ENST00000497022 ATP2B1P20020 1258 aa5.21□□□□□ -1.58
VPS26A-208ENST00000497022 EPHB4P54760 987 aa5.21□□□□□ -1.58
VPS26A-208ENST00000497022 R3HDM1Q15032 1099 aaKnown RBP5.21□□□□□ -1.58
VPS26A-208ENST00000497022 CHRNA2Q15822 529 aa5.21□□□□□ -1.58
VPS26A-208ENST00000497022 EMC4Q5J8M3 183 aa5.21□□□□□ -1.58
VPS26A-208ENST00000497022 STEAP3Q658P3 488 aa5.21□□□□□ -1.58
VPS26A-208ENST00000497022 RSPO2Q6UXX9 243 aaPredicted RBP5.21□□□□□ -1.58
VPS26A-208ENST00000497022 NSMFQ6X4W1 530 aa5.21□□□□□ -1.58
VPS26A-208ENST00000497022 LRRC47Q8N1G4 583 aaKnown RBP5.21□□□□□ -1.58
VPS26A-208ENST00000497022 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.21□□□□□ -1.58
VPS26A-208ENST00000497022 ZNF669Q96BR6 464 aaPredicted RBP5.21□□□□□ -1.58
VPS26A-208ENST00000497022 PHF20Q9BVI0 1012 aa5.21□□□□□ -1.58
VPS26A-208ENST00000497022 DEF6Q9H4E7 631 aa5.21□□□□□ -1.58
VPS26A-208ENST00000497022 EPB41L1Q9H4G0 881 aa5.21□□□□□ -1.58
VPS26A-208ENST00000497022 NGRNQ9NPE2 291 aaKnown RBP5.21□□□□□ -1.58
VPS26A-208ENST00000497022 PPP1R1BQ9UD71 204 aaPredicted RBP5.21□□□□□ -1.58
VPS26A-208ENST00000497022 ZNF652Q9Y2D9 606 aa5.21□□□□□ -1.58
VPS26A-208ENST00000497022 TESMINQ9Y4I5 508 aa5.21□□□□□ -1.58
VPS26A-208ENST00000497022 HS3ST3A1Q9Y663 406 aa5.21□□□□□ -1.58
VPS26A-208ENST00000497022 TRAV20A0A0B4J274 112 aa5.2□□□□□ -1.58
VPS26A-208ENST00000497022 TCRBV5S2A0A599 114 aa5.2□□□□□ -1.58
VPS26A-208ENST00000497022 DDX3XO00571 662 aaKnown RBP eCLIP5.2□□□□□ -1.58
VPS26A-208ENST00000497022 U2SURPO15042 1029 aaKnown RBP5.2□□□□□ -1.58
VPS26A-208ENST00000497022 MUSKO15146 869 aa5.2□□□□□ -1.58
VPS26A-208ENST00000497022 PDPK1O15530 556 aa5.2□□□□□ -1.58
VPS26A-208ENST00000497022 DGKIO75912 1065 aa5.2□□□□□ -1.58
VPS26A-208ENST00000497022 ZNF28P17035 718 aa5.2□□□□□ -1.58
VPS26A-208ENST00000497022 NTRK3Q16288 839 aa5.2□□□□□ -1.58
VPS26A-208ENST00000497022 CR1LQ2VPA4 569 aa5.2□□□□□ -1.58
VPS26A-208ENST00000497022 PKN3Q6P5Z2 889 aa5.2□□□□□ -1.58
VPS26A-208ENST00000497022 SPATC1Q76KD6 591 aa5.2□□□□□ -1.58
VPS26A-208ENST00000497022 PALM2Q8IXS6 379 aa5.2□□□□□ -1.58
VPS26A-208ENST00000497022 ARRDC4Q8NCT1 418 aa5.2□□□□□ -1.58
VPS26A-208ENST00000497022 DCAF4Q8WV16 495 aa5.2□□□□□ -1.58
VPS26A-208ENST00000497022 C8orf37Q96NL8 207 aa5.2□□□□□ -1.58
VPS26A-208ENST00000497022 JAM3Q9BX67 310 aa5.2□□□□□ -1.58
VPS26A-208ENST00000497022 PATE3B3GLJ2 98 aa5.19□□□□□ -1.58
VPS26A-208ENST00000497022 STAT5AP42229 794 aa5.19□□□□□ -1.58
VPS26A-208ENST00000497022 NKX3-2P78367 333 aa5.19□□□□□ -1.58
VPS26A-208ENST00000497022 IFRD2Q12894 506 aaPredicted RBP5.19□□□□□ -1.58
VPS26A-208ENST00000497022 RASGRF1Q13972 1273 aa5.19□□□□□ -1.58
VPS26A-208ENST00000497022 YOD1Q5VVQ6 348 aaPredicted RBP5.19□□□□□ -1.58
VPS26A-208ENST00000497022 NBPF6Q5VWK0 638 aa5.19□□□□□ -1.58
VPS26A-208ENST00000497022 ZNF585AQ6P3V2 769 aa5.19□□□□□ -1.58
VPS26A-208ENST00000497022 KCNT2Q6UVM3 1135 aa5.19□□□□□ -1.58
VPS26A-208ENST00000497022 STK32CQ86UX6 486 aa5.19□□□□□ -1.58
VPS26A-208ENST00000497022 NBPF4Q96M43 638 aa5.19□□□□□ -1.58
VPS26A-208ENST00000497022 YIPF4Q9BSR8 244 aa5.19□□□□□ -1.58
VPS26A-208ENST00000497022 SPATA9Q9BWV2 254 aa5.19□□□□□ -1.58
VPS26A-208ENST00000497022 CCDC113Q9H0I3 377 aa5.19□□□□□ -1.58
VPS26A-208ENST00000497022 SMOC1Q9H4F8 434 aa5.19□□□□□ -1.58
VPS26A-208ENST00000497022 PPARGC1AQ9UBK2 798 aaKnown RBP5.19□□□□□ -1.58
VPS26A-208ENST00000497022 PCDHB4Q9Y5E5 795 aa5.19□□□□□ -1.58
VPS26A-208ENST00000497022 BLACEA4D250 179 aa5.18□□□□□ -1.58
VPS26A-208ENST00000497022 CYP1A1P04798 512 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms