RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 FYB2Q5VWT5 728 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 CCBE1Q6UXH8 406 aaPredicted RBP3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 KSR2Q6VAB6 950 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 PACS1Q6VY07 963 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 MCM10Q7L590 875 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 MFSD4AQ8N468 514 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 NETO1Q8TDF5 533 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 TBC1D20Q96BZ9 403 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 SLC39A13Q96H72 371 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 PAWRQ96IZ0 340 aaKnown RBP3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 SLC9A7Q96T83 725 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 GMLQ99445 158 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 METTL22Q9BUU2 404 aaPredicted RBP3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 DDX41Q9UJV9 622 aaKnown RBP3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 R3HCC1Q9Y3T6 440 aaKnown RBP3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 A0A1B0GUL7 405 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 PRSS47A8MTI9 375 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 GSC2O15499 205 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 SGTAO43765 313 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 MYL3P08590 195 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 XRCC6P12956 609 aaKnown RBP eCLIP3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 CCNCP24863 283 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 TPP2P29144 1249 aaPredicted RBP3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 KIF5BP33176 963 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 CHMP4BP1P59074 171 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 AKNAD1Q5T1N1 836 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 CCDC30Q5VVM6 783 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 TMEM110Q86TL2 294 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 C11orf74Q86VG3 221 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 SNX32Q86XE0 403 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 LRRC49Q8IUZ0 686 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 ANKRD18AQ8IVF6 992 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 TMEM192Q8IY95 271 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 DNAJB8Q8NHS0 232 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 ZNF507Q8TCN5 953 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 USP33Q8TEY7 942 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 USP6NLQ92738 828 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 RSRP1Q9BUV0 290 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 MRPS23Q9Y3D9 190 aaKnown RBP3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 LRRFIP2Q9Y608 721 aaKnown RBP3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 COL17A1Q9UMD9 1497 aaPredicted RBP3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 EIF4G1Q04637 1599 aaKnown RBP3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 KANK1Q14678 1352 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 CCDC163A0A0D9SF12 145 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 CCDC85CA6NKD9 419 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 FAM155AB1AL88 458 aaPredicted RBP3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 C19orf81C9J6K1 198 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 ENPP3O14638 875 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 ZSCAN9O15535 394 aaPredicted RBP3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 FKTNO75072 461 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 SMC2O95347 1197 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 RAPGEF3O95398 923 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 ATF3P18847 181 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 OAS2P29728 719 aaKnown RBP3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 CA8P35219 290 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 PRPHP41219 470 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 PPM1FP49593 454 aaPredicted RBP3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 SNX16P57768 344 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 NUCB2P80303 420 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 MYBPC3Q14896 1274 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 PTPN14Q15678 1187 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 GRAMD1BQ3KR37 738 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 CYP27C1Q4G0S4 372 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 CCDC152Q4G0S7 254 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 TIGD5Q53EQ6 642 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 INO80DQ53TQ3 878 aaPredicted RBP3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 SPECC1Q5M775 1068 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 CFAP58Q5T655 872 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 MRPL41Q8IXM3 137 aaKnown RBP3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 SCLT1Q96NL6 688 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 SPAG5Q96R06 1193 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 SH3GL1Q99961 368 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 TMX1Q9H3N1 280 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 OGFRQ9NZT2 677 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 PRKAB1Q9Y478 270 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 ST14Q9Y5Y6 855 aa3.53□□□□□ -1.84
SNRNP48-202ENST00000496946 SPAG9O60271 1321 aaKnown RBP3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 FIBPO43427 364 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 ERLIN1O75477 346 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 RNASE1P07998 156 aaKnown RBP3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 RAG1P15918 1043 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 GRIK1P39086 918 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 NASPP49321 788 aaPredicted RBP3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 GEMIN4P57678 1058 aaKnown RBP3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 ZP2Q05996 745 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 MPP2Q14168 576 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 ATP2B3Q16720 1220 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 NAIF1Q69YI7 327 aaPredicted RBP3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 LEKR1Q6ZMV7 388 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 NEK10Q6ZWH5 1172 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 C14orf80Q86SX3 495 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 SPATS2Q86XZ4 545 aaKnown RBP3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 PEX5LQ8IYB4 626 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 SLFN12Q8IYM2 578 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 KRT222Q8N1A0 295 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 ADCY4Q8NFM4 1077 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 FAM76AQ8TAV0 307 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 WDR66Q8TBY9 1149 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms