RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 TCEAL9Q9UHQ7 104 aa24.59■■□□□ 1.53
C9orf3-222ENST00000496567 GNEQ9Y223 722 aaKnown RBP24.59■■□□□ 1.53
C9orf3-222ENST00000496567 DUSP11O75319 330 aaKnown RBP24.58■■□□□ 1.52
C9orf3-222ENST00000496567 YEATS4O95619 227 aa24.58■■□□□ 1.52
C9orf3-222ENST00000496567 RARBP10826 455 aa24.58■■□□□ 1.52
C9orf3-222ENST00000496567 NCLP19338 710 aaKnown RBP24.58■■□□□ 1.52
C9orf3-222ENST00000496567 LAMC2Q13753 1193 aa24.58■■□□□ 1.52
C9orf3-222ENST00000496567 STK38Q15208 465 aa24.58■■□□□ 1.52
C9orf3-222ENST00000496567 PTPAQ15257 358 aa24.58■■□□□ 1.52
C9orf3-222ENST00000496567 CELF3Q5SZQ8 465 aaKnown RBP24.58■■□□□ 1.52
C9orf3-222ENST00000496567 ARL6IP4Q66PJ3 421 aaKnown RBP24.58■■□□□ 1.52
C9orf3-222ENST00000496567 UIMC1Q96RL1 719 aa24.58■■□□□ 1.52
C9orf3-222ENST00000496567 TEKT3Q9BXF9 490 aa24.58■■□□□ 1.52
C9orf3-222ENST00000496567 MCOLN1Q9GZU1 580 aa24.58■■□□□ 1.52
C9orf3-222ENST00000496567 DDX20Q9UHI6 824 aaKnown RBP24.58■■□□□ 1.52
C9orf3-222ENST00000496567 PCDHA12Q9UN75 941 aa24.58■■□□□ 1.52
C9orf3-222ENST00000496567 DHX15O43143 795 aaKnown RBP24.57■■□□□ 1.52
C9orf3-222ENST00000496567 PSMD10O75832 226 aa24.57■■□□□ 1.52
C9orf3-222ENST00000496567 TXKP42681 527 aa24.57■■□□□ 1.52
C9orf3-222ENST00000496567 SLC39A14Q15043 492 aa24.57■■□□□ 1.52
C9orf3-222ENST00000496567 TMEM63BQ5T3F8 832 aa24.57■■□□□ 1.52
C9orf3-222ENST00000496567 METTL7BQ6UX53 244 aa24.57■■□□□ 1.52
C9orf3-222ENST00000496567 CYFIP1Q7L576 1253 aa24.57■■□□□ 1.52
C9orf3-222ENST00000496567 LINC00301Q8NCQ3 95 aa24.57■■□□□ 1.52
C9orf3-222ENST00000496567 ZNF333Q96JL9 665 aa24.57■■□□□ 1.52
C9orf3-222ENST00000496567 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.57■■□□□ 1.526e-41■■■■■ 57.7
C9orf3-222ENST00000496567 MORC2Q9Y6X9 1032 aaPredicted RBP24.57■■□□□ 1.52
C9orf3-222ENST00000496567 ADCY6O43306 1168 aa24.56■■□□□ 1.52
C9orf3-222ENST00000496567 TMEM266Q2M3C6 531 aa24.56■■□□□ 1.52
C9orf3-222ENST00000496567 COPS5Q92905 334 aa24.56■■□□□ 1.52
C9orf3-222ENST00000496567 TNPO1Q92973 898 aaKnown RBP24.56■■□□□ 1.52
C9orf3-222ENST00000496567 GJA10Q969M2 543 aa24.56■■□□□ 1.52
C9orf3-222ENST00000496567 EMID1Q96A84 441 aaPredicted RBP24.56■■□□□ 1.52
C9orf3-222ENST00000496567 AP5M1Q9H0R1 490 aa24.56■■□□□ 1.52
C9orf3-222ENST00000496567 UNC93B1Q9H1C4 597 aa24.56■■□□□ 1.52
C9orf3-222ENST00000496567 TTC12Q9H892 705 aaPredicted RBP24.56■■□□□ 1.52
C9orf3-222ENST00000496567 JPH1Q9HDC5 661 aaPredicted RBP24.56■■□□□ 1.52
C9orf3-222ENST00000496567 SLC9A2Q9UBY0 812 aa24.56■■□□□ 1.52
C9orf3-222ENST00000496567 FARP2O94887 1054 aaPredicted RBP24.55■■□□□ 1.52
C9orf3-222ENST00000496567 CCL5P13501 91 aa24.55■■□□□ 1.52
C9orf3-222ENST00000496567 KRT76Q01546 638 aa24.55■■□□□ 1.52
C9orf3-222ENST00000496567 GJC2Q5T442 439 aaPredicted RBP24.55■■□□□ 1.52
C9orf3-222ENST00000496567 DTHD1Q6ZMT9 781 aa24.55■■□□□ 1.52
C9orf3-222ENST00000496567 TLK2Q86UE8 772 aa24.55■■□□□ 1.52
C9orf3-222ENST00000496567 OR6J1Q8NGC5 347 aa24.55■■□□□ 1.52
C9orf3-222ENST00000496567 SCAND2PQ9GZW5 306 aaPredicted RBP24.55■■□□□ 1.52
C9orf3-222ENST00000496567 SPC25Q9HBM1 224 aa24.55■■□□□ 1.52
C9orf3-222ENST00000496567 DYNC1LI2O43237 492 aaPredicted RBP24.54■■□□□ 1.52
C9orf3-222ENST00000496567 ARHGAP1Q07960 439 aa24.54■■□□□ 1.52
C9orf3-222ENST00000496567 MTFR1Q15390 333 aa24.54■■□□□ 1.52
C9orf3-222ENST00000496567 KCNG4Q8TDN1 519 aa24.54■■□□□ 1.52
C9orf3-222ENST00000496567 RNF208Q9H0X6 261 aa24.54■■□□□ 1.52
C9orf3-222ENST00000496567 DDX39AO00148 427 aaKnown RBP24.54■■□□□ 1.52
C9orf3-222ENST00000496567 SPTLC2O15270 562 aa24.54■■□□□ 1.52
C9orf3-222ENST00000496567 ZNF746Q6NUN9 644 aaPredicted RBP24.54■■□□□ 1.52
C9orf3-222ENST00000496567 FERMT2Q96AC1 680 aa24.54■■□□□ 1.52
C9orf3-222ENST00000496567 SPATA33Q96N06 139 aa24.54■■□□□ 1.52
C9orf3-222ENST00000496567 RAB34Q9BZG1 259 aa24.54■■□□□ 1.52
C9orf3-222ENST00000496567 BCAS3Q9H6U6 928 aa24.54■■□□□ 1.52
C9orf3-222ENST00000496567 PAK6Q9NQU5 681 aaPredicted RBP24.54■■□□□ 1.52
C9orf3-222ENST00000496567 RCOR1Q9UKL0 485 aa24.54■■□□□ 1.52
C9orf3-222ENST00000496567 NOP56O00567 594 aaKnown RBP24.53■■□□□ 1.52
C9orf3-222ENST00000496567 SORBS3O60504 671 aa24.53■■□□□ 1.52
C9orf3-222ENST00000496567 FXR2P51116 673 aaKnown RBP eCLIP24.53■■□□□ 1.52
C9orf3-222ENST00000496567 PPP2R5CQ13362 524 aa24.53■■□□□ 1.52
C9orf3-222ENST00000496567 BRDTQ58F21 947 aaPredicted RBP24.53■■□□□ 1.52
C9orf3-222ENST00000496567 LENG1Q96BZ8 264 aaPredicted RBP24.53■■□□□ 1.52
C9orf3-222ENST00000496567 SPATA32Q96LK8 384 aa24.53■■□□□ 1.52
C9orf3-222ENST00000496567 XPNPEP3Q9NQH7 507 aa24.53■■□□□ 1.52
C9orf3-222ENST00000496567 VAV3Q9UKW4 847 aa24.53■■□□□ 1.52
C9orf3-222ENST00000496567 PPP6R2O75170 966 aa24.52■■□□□ 1.52
C9orf3-222ENST00000496567 MYCP01106 439 aaPredicted RBP24.52■■□□□ 1.52
C9orf3-222ENST00000496567 MARCKSP29966 332 aaPredicted RBP24.52■■□□□ 1.52
C9orf3-222ENST00000496567 TECP42680 631 aa24.52■■□□□ 1.52
C9orf3-222ENST00000496567 GJA9P57773 515 aa24.52■■□□□ 1.52
C9orf3-222ENST00000496567 SMAP1Q8IYB5 467 aaPredicted RBP24.52■■□□□ 1.52
C9orf3-222ENST00000496567 PPTC7Q8NI37 304 aa24.52■■□□□ 1.52
C9orf3-222ENST00000496567 CHAMP1Q96JM3 812 aa24.52■■□□□ 1.52
C9orf3-222ENST00000496567 UPF3AQ9H1J1 476 aaKnown RBP24.52■■□□□ 1.52
C9orf3-222ENST00000496567 ELP1O95163 1332 aa24.51■■□□□ 1.51
C9orf3-222ENST00000496567 DOCK5Q9H7D0 1870 aa24.51■■□□□ 1.51
C9orf3-222ENST00000496567 SFNP31947 248 aa24.51■■□□□ 1.51
C9orf3-222ENST00000496567 SP4Q02446 784 aa24.51■■□□□ 1.51
C9orf3-222ENST00000496567 PDIA5Q14554 519 aa24.51■■□□□ 1.51
C9orf3-222ENST00000496567 LHX8Q68G74 356 aa24.51■■□□□ 1.51
C9orf3-222ENST00000496567 B3GNT9Q6UX72 402 aa24.51■■□□□ 1.51
C9orf3-222ENST00000496567 UNC45AQ9H3U1 944 aa24.51■■□□□ 1.51
C9orf3-222ENST00000496567 SRPRBQ9Y5M8 271 aaKnown RBP24.51■■□□□ 1.51
C9orf3-222ENST00000496567 SYNRGQ9UMZ2 1314 aa24.51■■□□□ 1.51
C9orf3-222ENST00000496567 VWA3AA6NCI4 1184 aa24.5■■□□□ 1.51
C9orf3-222ENST00000496567 WDR64B1ANS9 1081 aa24.5■■□□□ 1.51
C9orf3-222ENST00000496567 PTGS1P23219 599 aa24.5■■□□□ 1.51
C9orf3-222ENST00000496567 CPT1AP50416 773 aa24.5■■□□□ 1.51
C9orf3-222ENST00000496567 JAK3P52333 1124 aa24.5■■□□□ 1.51
C9orf3-222ENST00000496567 ACTR2P61160 394 aa24.5■■□□□ 1.51
C9orf3-222ENST00000496567 HSDL1Q3SXM5 330 aa24.5■■□□□ 1.51
C9orf3-222ENST00000496567 KRI1Q8N9T8 703 aaKnown RBP24.5■■□□□ 1.51
C9orf3-222ENST00000496567 RDM1Q8NG50 284 aa24.5■■□□□ 1.51
C9orf3-222ENST00000496567 AFG1LQ8WV93 481 aa24.5■■□□□ 1.51
C9orf3-222ENST00000496567 LEO1Q8WVC0 666 aaPredicted RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms