RNA–Protein interactions for RNA: ENST00000496318.5

HLA-DQA1-207, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-207ENST00000496318 UTP14CQ5TAP6 766 aaKnown RBP13.35□□□□□ -0.27
HLA-DQA1-207ENST00000496318 TMTC2Q8N394 836 aa13.35□□□□□ -0.27
HLA-DQA1-207ENST00000496318 SLC17A8Q8NDX2 589 aa13.35□□□□□ -0.27
HLA-DQA1-207ENST00000496318 CYP2W1Q8TAV3 490 aa13.35□□□□□ -0.27
HLA-DQA1-207ENST00000496318 KCNB2Q92953 911 aa13.35□□□□□ -0.27
HLA-DQA1-207ENST00000496318 EMID1Q96A84 441 aaPredicted RBP13.35□□□□□ -0.27
HLA-DQA1-207ENST00000496318 TIFAQ96CG3 184 aa13.35□□□□□ -0.27
HLA-DQA1-207ENST00000496318 LZTS2Q9BRK4 669 aa13.35□□□□□ -0.27
HLA-DQA1-207ENST00000496318 MLXIPQ9HAP2 919 aa13.35□□□□□ -0.27
HLA-DQA1-207ENST00000496318 NCOA5Q9HCD5 579 aaKnown RBP13.35□□□□□ -0.27
HLA-DQA1-207ENST00000496318 MAP3K20Q9NYL2 800 aaKnown RBP13.35□□□□□ -0.27
HLA-DQA1-207ENST00000496318 V9GY48 417 aaPredicted RBP13.35□□□□□ -0.27
HLA-DQA1-207ENST00000496318 KIAA1671Q9BY89 1806 aa13.34□□□□□ -0.27
HLA-DQA1-207ENST00000496318 SPATA31C2B4DYI2 1134 aa13.34□□□□□ -0.27
HLA-DQA1-207ENST00000496318 STXBP3O00186 592 aa13.34□□□□□ -0.27
HLA-DQA1-207ENST00000496318 PIK3CDO00329 1044 aa13.34□□□□□ -0.27
HLA-DQA1-207ENST00000496318 KPNA6O60684 536 aa13.34□□□□□ -0.27
HLA-DQA1-207ENST00000496318 ITGB5P18084 799 aa13.34□□□□□ -0.27
HLA-DQA1-207ENST00000496318 NAPAP54920 295 aa13.34□□□□□ -0.27
HLA-DQA1-207ENST00000496318 FGD1P98174 961 aa13.34□□□□□ -0.27
HLA-DQA1-207ENST00000496318 MBTPS1Q14703 1052 aa13.34□□□□□ -0.27
HLA-DQA1-207ENST00000496318 PCNX4Q63HM2 1172 aa13.34□□□□□ -0.27
HLA-DQA1-207ENST00000496318 SYNE3Q6ZMZ3 975 aa13.34□□□□□ -0.27
HLA-DQA1-207ENST00000496318 C7orf31Q8N865 590 aa13.34□□□□□ -0.27
HLA-DQA1-207ENST00000496318 USP38Q8NB14 1042 aa13.34□□□□□ -0.27
HLA-DQA1-207ENST00000496318 PHKBQ93100 1093 aa13.34□□□□□ -0.27
HLA-DQA1-207ENST00000496318 ZBTB10Q96DT7 871 aa13.34□□□□□ -0.27
HLA-DQA1-207ENST00000496318 MAF1Q9H063 256 aa13.34□□□□□ -0.27
HLA-DQA1-207ENST00000496318 PRDM12Q9H4Q4 367 aa13.34□□□□□ -0.27
HLA-DQA1-207ENST00000496318 ZNF576Q9H609 170 aa13.34□□□□□ -0.27
HLA-DQA1-207ENST00000496318 PCDHA6Q9UN73 950 aa13.34□□□□□ -0.27
HLA-DQA1-207ENST00000496318 PCDHA8Q9Y5H6 950 aa13.34□□□□□ -0.27
HLA-DQA1-207ENST00000496318 FIBPO43427 364 aa13.33□□□□□ -0.28
HLA-DQA1-207ENST00000496318 NBNO60934 754 aa13.33□□□□□ -0.28
HLA-DQA1-207ENST00000496318 CTSHP09668 335 aa13.33□□□□□ -0.28
HLA-DQA1-207ENST00000496318 SUPT20HL2P0C7V6 817 aa13.33□□□□□ -0.28
HLA-DQA1-207ENST00000496318 KCNA2P16389 499 aa13.33□□□□□ -0.28
HLA-DQA1-207ENST00000496318 RPS6KB1P23443 525 aa13.33□□□□□ -0.28
HLA-DQA1-207ENST00000496318 SMARCA1P28370 1054 aa13.33□□□□□ -0.28
HLA-DQA1-207ENST00000496318 METAP2P50579 478 aaKnown RBP eCLIP13.33□□□□□ -0.28
HLA-DQA1-207ENST00000496318 TRIM71Q2Q1W2 868 aaKnown RBP13.33□□□□□ -0.28
HLA-DQA1-207ENST00000496318 TRAF7Q6Q0C0 670 aa13.33□□□□□ -0.28
HLA-DQA1-207ENST00000496318 BLOC1S2Q6QNY1 142 aa13.33□□□□□ -0.28
HLA-DQA1-207ENST00000496318 GPR20Q99678 358 aa13.33□□□□□ -0.28
HLA-DQA1-207ENST00000496318 UPF3BQ9BZI7 483 aaKnown RBP13.33□□□□□ -0.28
HLA-DQA1-207ENST00000496318 FTOQ9C0B1 505 aaKnown RBP eCLIP13.33□□□□□ -0.28
HLA-DQA1-207ENST00000496318 CERS4Q9HA82 394 aa13.33□□□□□ -0.28
HLA-DQA1-207ENST00000496318 NOP56O00567 594 aaKnown RBP13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 TREHO43280 583 aa13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 SMIM10L2AP0DMW4 78 aa13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 SMIM10L2BP0DMW5 78 aa13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 CKBP12277 381 aa13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 FOSL2P15408 326 aa13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 MARK3P27448 753 aa13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 ICAM3P32942 547 aa13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 CCT2P78371 535 aaKnown RBP13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 DEFB103AP81534 67 aa13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 PTPN11Q06124 597 aaPredicted RBP13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 TRAF1Q13077 416 aa13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 KRT32Q14532 448 aa13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 GNPTABQ3T906 1256 aa13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 ZNF618Q5T7W0 954 aa13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 JAKMIP3Q5VZ66 844 aa13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 METTL7BQ6UX53 244 aa13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 LRRC8DQ7L1W4 858 aa13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 SESTD1Q86VW0 696 aa13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 SAMD3Q8N6K7 520 aa13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 MAFAQ8NHW3 353 aaPredicted RBP13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 RASGRP4Q8TDF6 673 aa13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 ANO3Q9BYT9 981 aa13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 PRDM6Q9NQX0 595 aa13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 SETD4Q9NVD3 440 aa13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 RBM28Q9NW13 759 aaKnown RBP13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 SLC4A7Q9Y6M7 1214 aa13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 NCOR1O75376 2440 aa13.32□□□□□ -0.28
HLA-DQA1-207ENST00000496318 XIRP2A4UGR9 3374 aa13.31□□□□□ -0.28
HLA-DQA1-207ENST00000496318 SPDYE3A6NKU9 549 aa13.31□□□□□ -0.28
HLA-DQA1-207ENST00000496318 H3BRB1 525 aa13.31□□□□□ -0.28
HLA-DQA1-207ENST00000496318 RFXAPO00287 272 aa13.31□□□□□ -0.28
HLA-DQA1-207ENST00000496318 PITPNM1O00562 1244 aa13.31□□□□□ -0.28
HLA-DQA1-207ENST00000496318 ARP10275 920 aa13.31□□□□□ -0.28
HLA-DQA1-207ENST00000496318 ATP2A2P16615 1042 aaKnown RBP13.31□□□□□ -0.28
HLA-DQA1-207ENST00000496318 ADCY7P51828 1080 aa13.31□□□□□ -0.28
HLA-DQA1-207ENST00000496318 TOB2Q14106 344 aaPredicted RBP13.31□□□□□ -0.28
HLA-DQA1-207ENST00000496318 ADGRE1Q14246 886 aa13.31□□□□□ -0.28
HLA-DQA1-207ENST00000496318 PKN1Q16512 942 aa13.31□□□□□ -0.28
HLA-DQA1-207ENST00000496318 KCNV1Q6PIU1 500 aa13.31□□□□□ -0.28
HLA-DQA1-207ENST00000496318 RETREG2Q8NC44 543 aa13.31□□□□□ -0.28
HLA-DQA1-207ENST00000496318 PPM1EQ8WY54 764 aa13.31□□□□□ -0.28
HLA-DQA1-207ENST00000496318 SEZ6LQ9BYH1 1024 aa13.31□□□□□ -0.28
HLA-DQA1-207ENST00000496318 RNPEPQ9H4A4 650 aa13.31□□□□□ -0.28
HLA-DQA1-207ENST00000496318 TUT1Q9H6E5 874 aaKnown RBP13.31□□□□□ -0.28
HLA-DQA1-207ENST00000496318 UBIAD1Q9Y5Z9 338 aa13.31□□□□□ -0.28
HLA-DQA1-207ENST00000496318 GSTTP1A0A1W2PQM5 241 aa13.3□□□□□ -0.28
HLA-DQA1-207ENST00000496318 LCHNA4D1U4 455 aa13.3□□□□□ -0.28
HLA-DQA1-207ENST00000496318 SMCO2A6NFE2 343 aa13.3□□□□□ -0.28
HLA-DQA1-207ENST00000496318 EPOPA6NHQ4 379 aa13.3□□□□□ -0.28
HLA-DQA1-207ENST00000496318 DDX39AO00148 427 aaKnown RBP13.3□□□□□ -0.28
HLA-DQA1-207ENST00000496318 PPFIA4O75335 1185 aa13.3□□□□□ -0.28
HLA-DQA1-207ENST00000496318 TGFB3P10600 412 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms