RNA–Protein interactions for RNA: ENST00000496206.5

NEPRO-223, Transcript of nucleolus and neural progenitor protein, human

TSL 5

Gene NEPRO, Length 751 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-223	ENST00000496206	NEDD9	Q14511	834 aa		10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	PCNX4	Q63HM2	1172 aa		10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	XRRA1	Q6P2D8	792 aa		10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	SYNE3	Q6ZMZ3	975 aa		10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	TMTC3	Q6ZXV5	915 aa		10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	CYFIP1	Q7L576	1253 aa		10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	SGMS1	Q86VZ5	419 aa		10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	CCDC82	Q8N4S0	544 aa		10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	USP38	Q8NB14	1042 aa		10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	FANCB	Q8NB91	859 aa		10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	BCAS3	Q9H6U6	928 aa		10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	PSTPIP2	Q9H939	334 aa		10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	RTEL1	Q9NZ71	1219 aa		10.1	□□□□□ -0.79
NEPRO-223	ENST00000496206	COL4A4	P53420	1690 aa	Predicted RBP	10.09	□□□□□ -0.79
NEPRO-223	ENST00000496206	SPATA31C2	B4DYI2	1134 aa		10.09	□□□□□ -0.79
NEPRO-223	ENST00000496206		H3BRB1	525 aa		10.09	□□□□□ -0.79
NEPRO-223	ENST00000496206	PARN	O95453	639 aa	Known RBP	10.09	□□□□□ -0.79
NEPRO-223	ENST00000496206	LGALS2	P05162	132 aa		10.09	□□□□□ -0.79
NEPRO-223	ENST00000496206	CA3	P07451	260 aa		10.09	□□□□□ -0.79
NEPRO-223	ENST00000496206	IGFBP4	P22692	258 aa		10.09	□□□□□ -0.79
NEPRO-223	ENST00000496206	ZNF200	P98182	395 aa	Predicted RBP	10.09	□□□□□ -0.79
NEPRO-223	ENST00000496206	SEMA3F	Q13275	785 aa		10.09	□□□□□ -0.79
NEPRO-223	ENST00000496206	APOA5	Q6Q788	366 aa		10.09	□□□□□ -0.79
NEPRO-223	ENST00000496206	METTL7B	Q6UX53	244 aa		10.09	□□□□□ -0.79
NEPRO-223	ENST00000496206	HEATR3	Q7Z4Q2	680 aa		10.09	□□□□□ -0.79
NEPRO-223	ENST00000496206	HERC6	Q8IVU3	1022 aa		10.09	□□□□□ -0.79
NEPRO-223	ENST00000496206	PHOSPHO2	Q8TCD6	241 aa		10.09	□□□□□ -0.79
NEPRO-223	ENST00000496206	PPM1E	Q8WY54	764 aa		10.09	□□□□□ -0.79
NEPRO-223	ENST00000496206	NEK1	Q96PY6	1258 aa		10.09	□□□□□ -0.79
NEPRO-223	ENST00000496206	C16orf70	Q9BSU1	422 aa		10.09	□□□□□ -0.79
NEPRO-223	ENST00000496206	COL25A1	Q9BXS0	654 aa	Predicted RBP	10.09	□□□□□ -0.79
NEPRO-223	ENST00000496206	TUT1	Q9H6E5	874 aa	Known RBP	10.09	□□□□□ -0.79
NEPRO-223	ENST00000496206	SI	P14410	1827 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	LOXHD1	Q8IVV2	1947 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	C17orf102	A2RUQ5	167 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	SPDYE3	A6NKU9	549 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	KIF28P	B7ZC32	967 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	NBN	O60934	754 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	CXCL10	P02778	98 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	SMIM10L2A	P0DMW4	78 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	SMIM10L2B	P0DMW5	78 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	WDR5	P61964	334 aa	Known RBP	10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	SP4	Q02446	784 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	ADGRE1	Q14246	886 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	HIC1	Q14526	733 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	GPNMB	Q14956	572 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	UBE2S	Q16763	222 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	TRIM71	Q2Q1W2	868 aa	Known RBP	10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	ZNF618	Q5T7W0	954 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	CNKSR3	Q6P9H4	555 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	DHX32	Q7L7V1	743 aa	Known RBP	10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	NLRX1	Q86UT6	975 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	SERINC5	Q86VE9	423 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	GIMAP8	Q8ND71	665 aa	Predicted RBP	10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	ATP6V0A1	Q93050	837 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	WNT8B	Q93098	351 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	TCEANC2	Q96MN5	208 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	GPR20	Q99678	358 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	SENP7	Q9BQF6	1050 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	USP26	Q9BXU7	913 aa		10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	RBM28	Q9NW13	759 aa	Known RBP	10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	ZNF215	Q9UL58	517 aa	Predicted RBP	10.08	□□□□□ -0.8
NEPRO-223	ENST00000496206	CNTNAP5	Q8WYK1	1306 aa		10.07	□□□□□ -0.8
NEPRO-223	ENST00000496206	ZBTB43	O43298	467 aa		10.07	□□□□□ -0.8
NEPRO-223	ENST00000496206	TLL1	O43897	1013 aa		10.07	□□□□□ -0.8
NEPRO-223	ENST00000496206	THPO	P40225	353 aa		10.07	□□□□□ -0.8
NEPRO-223	ENST00000496206	EXOSC10	Q01780	885 aa	Known RBP	10.07	□□□□□ -0.8
NEPRO-223	ENST00000496206	KRT32	Q14532	448 aa		10.07	□□□□□ -0.8
NEPRO-223	ENST00000496206	CCDC85B	Q15834	202 aa	Predicted RBP	10.07	□□□□□ -0.8
NEPRO-223	ENST00000496206	RTN1	Q16799	776 aa		10.07	□□□□□ -0.8
NEPRO-223	ENST00000496206	ADCK5	Q3MIX3	580 aa		10.07	□□□□□ -0.8
NEPRO-223	ENST00000496206	TSGA10IP	Q3SY00	556 aa		10.07	□□□□□ -0.8
NEPRO-223	ENST00000496206	UTP14C	Q5TAP6	766 aa	Known RBP	10.07	□□□□□ -0.8
NEPRO-223	ENST00000496206	TRAF7	Q6Q0C0	670 aa		10.07	□□□□□ -0.8
NEPRO-223	ENST00000496206	TRIM50	Q86XT4	487 aa		10.07	□□□□□ -0.8
NEPRO-223	ENST00000496206	RASEF	Q8IZ41	740 aa		10.07	□□□□□ -0.8
NEPRO-223	ENST00000496206	GPRASP2	Q96D09	838 aa		10.07	□□□□□ -0.8
NEPRO-223	ENST00000496206	CDHR1	Q96JP9	859 aa		10.07	□□□□□ -0.8
NEPRO-223	ENST00000496206	EHMT1	Q9H9B1	1298 aa		10.07	□□□□□ -0.8
NEPRO-223	ENST00000496206	BRWD1	Q9NSI6	2320 aa		10.07	□□□□□ -0.8
NEPRO-223	ENST00000496206	EMSY	Q7Z589	1322 aa		10.07	□□□□□ -0.8
NEPRO-223	ENST00000496206	MYH9	P35579	1960 aa	Known RBP	10.06	□□□□□ -0.8
NEPRO-223	ENST00000496206	NLRC5	Q86WI3	1866 aa		10.06	□□□□□ -0.8
NEPRO-223	ENST00000496206	WDR81	Q562E7	1941 aa		10.06	□□□□□ -0.8
NEPRO-223	ENST00000496206	KLF18	A0A0U1RQI7	1052 aa		10.06	□□□□□ -0.8
NEPRO-223	ENST00000496206	ABHD14A-ACY1	A0A1B0GW23	586 aa		10.06	□□□□□ -0.8
NEPRO-223	ENST00000496206	GOLGA8A	A7E2F4	631 aa		10.06	□□□□□ -0.8
NEPRO-223	ENST00000496206	GOLGA8B	A8MQT2	603 aa		10.06	□□□□□ -0.8
NEPRO-223	ENST00000496206	RSPH10B2	B2RC85	870 aa		10.06	□□□□□ -0.8
NEPRO-223	ENST00000496206	TREH	O43280	583 aa		10.06	□□□□□ -0.8
NEPRO-223	ENST00000496206	EFCAB14	O75071	495 aa		10.06	□□□□□ -0.8
NEPRO-223	ENST00000496206	HMGB1	P09429	215 aa	Known RBP	10.06	□□□□□ -0.8
NEPRO-223	ENST00000496206	RSPH10B	P0C881	870 aa		10.06	□□□□□ -0.8
NEPRO-223	ENST00000496206	GNAT1	P11488	350 aa		10.06	□□□□□ -0.8
NEPRO-223	ENST00000496206	ITGB5	P18084	799 aa		10.06	□□□□□ -0.8
NEPRO-223	ENST00000496206	HOXC8	P31273	242 aa		10.06	□□□□□ -0.8
NEPRO-223	ENST00000496206	NAPA	P54920	295 aa		10.06	□□□□□ -0.8
NEPRO-223	ENST00000496206	DEFB103A	P81534	67 aa		10.06	□□□□□ -0.8
NEPRO-223	ENST00000496206	FGD1	P98174	961 aa		10.06	□□□□□ -0.8
NEPRO-223	ENST00000496206	MTMR1	Q13613	665 aa		10.06	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms