RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 SMURF1Q9HCE7 757 aa7.37□□□□□ -1.23
SSR3-208ENST00000496050 EMC7Q9NPA0 242 aa7.37□□□□□ -1.23
SSR3-208ENST00000496050 TCEAL9Q9UHQ7 104 aa7.37□□□□□ -1.23
SSR3-208ENST00000496050 HIP1RO75146 1068 aa7.36□□□□□ -1.23
SSR3-208ENST00000496050 KRT37O76014 449 aa7.36□□□□□ -1.23
SSR3-208ENST00000496050 MSL3P1P0C860 447 aa7.36□□□□□ -1.23
SSR3-208ENST00000496050 ZBTB48P10074 688 aaPredicted RBP7.36□□□□□ -1.23
SSR3-208ENST00000496050 PNLIPP16233 465 aa7.36□□□□□ -1.23
SSR3-208ENST00000496050 MTMR1Q13613 665 aa7.36□□□□□ -1.23
SSR3-208ENST00000496050 STEAP3Q658P3 488 aa7.36□□□□□ -1.23
SSR3-208ENST00000496050 CYP4F22Q6NT55 531 aa7.36□□□□□ -1.23
SSR3-208ENST00000496050 EFHBQ8N7U6 833 aa7.36□□□□□ -1.23
SSR3-208ENST00000496050 PLCD4Q9BRC7 762 aa7.36□□□□□ -1.23
SSR3-208ENST00000496050 CRTAC1Q9NQ79 661 aa7.36□□□□□ -1.23
SSR3-208ENST00000496050 SPEF1Q9Y4P9 236 aa7.36□□□□□ -1.23
SSR3-208ENST00000496050 TCRBV5S4A2TA0A5A2 114 aa7.35□□□□□ -1.23
SSR3-208ENST00000496050 PSPNO60542 156 aa7.35□□□□□ -1.23
SSR3-208ENST00000496050 PARNO95453 639 aaKnown RBP7.35□□□□□ -1.23
SSR3-208ENST00000496050 SLC6A11P48066 632 aa7.35□□□□□ -1.23
SSR3-208ENST00000496050 EPHB1P54762 984 aa7.35□□□□□ -1.23
SSR3-208ENST00000496050 IRF9Q00978 393 aa7.35□□□□□ -1.23
SSR3-208ENST00000496050 RGL3Q3MIN7 710 aa7.35□□□□□ -1.23
SSR3-208ENST00000496050 TRIM48Q8IWZ4 208 aa7.35□□□□□ -1.23
SSR3-208ENST00000496050 CNTD1Q8N815 330 aa7.35□□□□□ -1.23
SSR3-208ENST00000496050 NETO2Q8NC67 525 aa7.35□□□□□ -1.23
SSR3-208ENST00000496050 UHMK1Q8TAS1 419 aaKnown RBP7.35□□□□□ -1.23
SSR3-208ENST00000496050 MTMR8Q96EF0 704 aa7.35□□□□□ -1.23
SSR3-208ENST00000496050 MENTQ9BUN1 341 aa7.35□□□□□ -1.23
SSR3-208ENST00000496050 ASPSCR1Q9BZE9 553 aa7.35□□□□□ -1.23
SSR3-208ENST00000496050 AP5M1Q9H0R1 490 aa7.35□□□□□ -1.23
SSR3-208ENST00000496050 C19orf44Q9H6X5 657 aa7.35□□□□□ -1.23
SSR3-208ENST00000496050 ACSS2Q9NR19 701 aa7.35□□□□□ -1.23
SSR3-208ENST00000496050 PCMTD2Q9NV79 361 aa7.35□□□□□ -1.23
SSR3-208ENST00000496050 GPR160Q9UJ42 338 aa7.35□□□□□ -1.23
SSR3-208ENST00000496050 SRPK3Q9UPE1 567 aa7.35□□□□□ -1.23
SSR3-208ENST00000496050 SPO11Q9Y5K1 396 aa7.35□□□□□ -1.23
SSR3-208ENST00000496050 ATP23Q9Y6H3 246 aa7.35□□□□□ -1.23
SSR3-208ENST00000496050 MAN2B1O00754 1011 aa7.34□□□□□ -1.23
SSR3-208ENST00000496050 CLASP2O75122 1294 aaKnown RBP7.34□□□□□ -1.23
SSR3-208ENST00000496050 TADA3O75528 432 aa7.34□□□□□ -1.23
SSR3-208ENST00000496050 SESN3P58005 492 aa7.34□□□□□ -1.23
SSR3-208ENST00000496050 ERVFC1P60507 584 aa7.34□□□□□ -1.23
SSR3-208ENST00000496050 KIR3DS1Q14943 382 aa7.34□□□□□ -1.23
SSR3-208ENST00000496050 TTF1Q15361 905 aaPredicted RBP7.34□□□□□ -1.23
SSR3-208ENST00000496050 EMC4Q5J8M3 183 aa7.34□□□□□ -1.23
SSR3-208ENST00000496050 SYDE2Q5VT97 1194 aa7.34□□□□□ -1.23
SSR3-208ENST00000496050 NLRX1Q86UT6 975 aa7.34□□□□□ -1.23
SSR3-208ENST00000496050 DCP2Q8IU60 420 aaKnown RBP7.34□□□□□ -1.23
SSR3-208ENST00000496050 PHOSPHO1Q8TCT1 267 aa7.34□□□□□ -1.23
SSR3-208ENST00000496050 SEC14L1Q92503 715 aa7.34□□□□□ -1.23
SSR3-208ENST00000496050 SLC5A5Q92911 643 aa7.34□□□□□ -1.23
SSR3-208ENST00000496050 CCDC8Q9H0W5 538 aaPredicted RBP7.34□□□□□ -1.23
SSR3-208ENST00000496050 SP110Q9HB58 689 aa7.34□□□□□ -1.23
SSR3-208ENST00000496050 CHPF2Q9P2E5 772 aa7.34□□□□□ -1.23
SSR3-208ENST00000496050 NUDT5Q9UKK9 219 aa7.34□□□□□ -1.23
SSR3-208ENST00000496050 SCDO00767 359 aa7.33□□□□□ -1.24
SSR3-208ENST00000496050 KCNK3O14649 394 aa7.33□□□□□ -1.24
SSR3-208ENST00000496050 CYP17A1P05093 508 aa7.33□□□□□ -1.24
SSR3-208ENST00000496050 GLI4P10075 376 aa7.33□□□□□ -1.24
SSR3-208ENST00000496050 YBX3P16989 372 aaKnown RBP eCLIP7.33□□□□□ -1.24
SSR3-208ENST00000496050 LSP1P33241 339 aa7.33□□□□□ -1.24
SSR3-208ENST00000496050 KIF11P52732 1056 aa7.33□□□□□ -1.24
SSR3-208ENST00000496050 DDB1Q16531 1140 aa7.33□□□□□ -1.24
SSR3-208ENST00000496050 FIGNQ5HY92 759 aa7.33□□□□□ -1.24
SSR3-208ENST00000496050 NFXL1Q6ZNB6 911 aa7.33□□□□□ -1.24
SSR3-208ENST00000496050 HDGFL2Q7Z4V5 671 aaPredicted RBP7.33□□□□□ -1.24
SSR3-208ENST00000496050 KIAA1958Q8N8K9 716 aa7.33□□□□□ -1.24
SSR3-208ENST00000496050 SH3RF2Q8TEC5 729 aa7.33□□□□□ -1.24
SSR3-208ENST00000496050 COG1Q8WTW3 980 aa7.33□□□□□ -1.24
SSR3-208ENST00000496050 PEX11GQ96HA9 241 aa7.33□□□□□ -1.24
SSR3-208ENST00000496050 PCIF1Q9H4Z3 704 aa7.33□□□□□ -1.24
SSR3-208ENST00000496050 MBNL3Q9NUK0 354 aaKnown RBP7.33□□□□□ -1.24
SSR3-208ENST00000496050 C19orf73Q9NVV2 129 aa7.33□□□□□ -1.24
SSR3-208ENST00000496050 H2AFY2Q9P0M6 372 aaPredicted RBP7.33□□□□□ -1.24
SSR3-208ENST00000496050 FBLN5Q9UBX5 448 aa7.33□□□□□ -1.24
SSR3-208ENST00000496050 EID1Q9Y6B2 187 aa7.33□□□□□ -1.24
SSR3-208ENST00000496050 SLC27A2O14975 620 aa7.32□□□□□ -1.24
SSR3-208ENST00000496050 PRKD3O94806 890 aa7.32□□□□□ -1.24
SSR3-208ENST00000496050 RNASE1P07998 156 aaKnown RBP7.32□□□□□ -1.24
SSR3-208ENST00000496050 SLC9A1P19634 815 aa7.32□□□□□ -1.24
SSR3-208ENST00000496050 TRHRP34981 398 aaPredicted RBP7.32□□□□□ -1.24
SSR3-208ENST00000496050 GJA4P35212 333 aa7.32□□□□□ -1.24
SSR3-208ENST00000496050 AFMP43652 599 aa7.32□□□□□ -1.24
SSR3-208ENST00000496050 CCDC181Q5TID7 509 aa7.32□□□□□ -1.24
SSR3-208ENST00000496050 BROXQ5VW32 411 aa7.32□□□□□ -1.24
SSR3-208ENST00000496050 CREB3L3Q68CJ9 461 aa7.32□□□□□ -1.24
SSR3-208ENST00000496050 CC2D1AQ6P1N0 951 aaPredicted RBP7.32□□□□□ -1.24
SSR3-208ENST00000496050 PAQR3Q6TCH7 311 aa7.32□□□□□ -1.24
SSR3-208ENST00000496050 KCTD1Q719H9 257 aa7.32□□□□□ -1.24
SSR3-208ENST00000496050 RASSF3Q86WH2 238 aa7.32□□□□□ -1.24
SSR3-208ENST00000496050 SIRT2Q8IXJ6 389 aa7.32□□□□□ -1.24
SSR3-208ENST00000496050 DLG3Q92796 817 aa7.32□□□□□ -1.24
SSR3-208ENST00000496050 AHCYL2Q96HN2 611 aaKnown RBP7.32□□□□□ -1.24
SSR3-208ENST00000496050 TRIM8Q9BZR9 551 aa7.32□□□□□ -1.24
SSR3-208ENST00000496050 CD244Q9BZW8 370 aa7.32□□□□□ -1.24
SSR3-208ENST00000496050 KCNH7Q9NS40 1196 aa7.32□□□□□ -1.24
SSR3-208ENST00000496050 DBR1Q9UK59 544 aaKnown RBP7.32□□□□□ -1.24
SSR3-208ENST00000496050 TRHDEQ9UKU6 1024 aa7.32□□□□□ -1.24
SSR3-208ENST00000496050 CTNND2Q9UQB3 1225 aa7.32□□□□□ -1.24
SSR3-208ENST00000496050 ZNF652Q9Y2D9 606 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms