RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 LENG9Q96B70 501 aa22.09■■□□□ 1.13
HDAC4-212ENST00000495497 STARD7Q9NQZ5 370 aa22.09■■□□□ 1.13
HDAC4-212ENST00000495497 KIF3AQ9Y496 699 aa22.09■■□□□ 1.13
HDAC4-212ENST00000495497 KIF28PB7ZC32 967 aa22.08■■□□□ 1.13
HDAC4-212ENST00000495497 PSMC6P62333 389 aa22.08■■□□□ 1.13
HDAC4-212ENST00000495497 PURAQ00577 322 aaKnown RBP22.08■■□□□ 1.13
HDAC4-212ENST00000495497 BRDTQ58F21 947 aaPredicted RBP22.08■■□□□ 1.13
HDAC4-212ENST00000495497 METTL7BQ6UX53 244 aa22.08■■□□□ 1.13
HDAC4-212ENST00000495497 PPP1R13LQ8WUF5 828 aa22.08■■□□□ 1.13
HDAC4-212ENST00000495497 GLT1D1Q96MS3 346 aa22.08■■□□□ 1.13
HDAC4-212ENST00000495497 POLR3EQ9NVU0 708 aa22.08■■□□□ 1.13
HDAC4-212ENST00000495497 MYH7BA7E2Y1 1941 aa22.08■■□□□ 1.12
HDAC4-212ENST00000495497 NEK8Q86SG6 692 aa22.07■■□□□ 1.12
HDAC4-212ENST00000495497 GJA10Q969M2 543 aa22.07■■□□□ 1.12
HDAC4-212ENST00000495497 ZNF577Q9BSK1 485 aa22.07■■□□□ 1.12
HDAC4-212ENST00000495497 CYP3A7-CYP3A51PA0A087WV96 503 aa22.06■■□□□ 1.12
HDAC4-212ENST00000495497 DDX39AO00148 427 aaKnown RBP22.06■■□□□ 1.12
HDAC4-212ENST00000495497 WNT7AO00755 349 aa22.06■■□□□ 1.12
HDAC4-212ENST00000495497 MSH4O15457 936 aa22.06■■□□□ 1.12
HDAC4-212ENST00000495497 CYP3A7P24462 503 aa22.06■■□□□ 1.12
HDAC4-212ENST00000495497 SETQ01105 290 aaPredicted RBP22.06■■□□□ 1.12
HDAC4-212ENST00000495497 GNL2Q13823 731 aaKnown RBP22.06■■□□□ 1.12
HDAC4-212ENST00000495497 DGKDQ16760 1214 aa22.06■■□□□ 1.12
HDAC4-212ENST00000495497 Q4G0T1 1027 aa22.06■■□□□ 1.12
HDAC4-212ENST00000495497 LARP1BQ659C4 914 aaKnown RBP22.06■■□□□ 1.12
HDAC4-212ENST00000495497 GIMAP8Q8ND71 665 aaPredicted RBP22.06■■□□□ 1.12
HDAC4-212ENST00000495497 DPF3Q92784 378 aa22.06■■□□□ 1.12
HDAC4-212ENST00000495497 INTS4Q96HW7 963 aaKnown RBP22.06■■□□□ 1.12
HDAC4-212ENST00000495497 GPR20Q99678 358 aa22.06■■□□□ 1.12
HDAC4-212ENST00000495497 MTG1Q9BT17 334 aaPredicted RBP22.06■■□□□ 1.12
HDAC4-212ENST00000495497 HTATIP2Q9BUP3 242 aa22.06■■□□□ 1.12
HDAC4-212ENST00000495497 FOXP1Q9H334 677 aaPredicted RBP22.06■■□□□ 1.12
HDAC4-212ENST00000495497 H3BQV1 296 aa22.05■■□□□ 1.12
HDAC4-212ENST00000495497 IPO5O00410 1097 aaKnown RBP22.05■■□□□ 1.12
HDAC4-212ENST00000495497 NOP56O00567 594 aaKnown RBP22.05■■□□□ 1.12
HDAC4-212ENST00000495497 DHX15O43143 795 aaKnown RBP22.05■■□□□ 1.12
HDAC4-212ENST00000495497 SLC37A4O43826 429 aa22.05■■□□□ 1.12
HDAC4-212ENST00000495497 CCNT1O60563 726 aaKnown RBP22.05■■□□□ 1.12
HDAC4-212ENST00000495497 ZNF286BP0CG31 522 aa22.05■■□□□ 1.12
HDAC4-212ENST00000495497 ATP2B1P20020 1258 aa22.05■■□□□ 1.12
HDAC4-212ENST00000495497 CHMP4BP1P59074 171 aa22.05■■□□□ 1.12
HDAC4-212ENST00000495497 SPRYD3Q8NCJ5 442 aa22.05■■□□□ 1.12
HDAC4-212ENST00000495497 MBOAT7Q96N66 472 aa22.05■■□□□ 1.12
HDAC4-212ENST00000495497 SDF4Q9BRK5 362 aa22.05■■□□□ 1.12
HDAC4-212ENST00000495497 DDX25Q9UHL0 483 aaKnown RBP22.05■■□□□ 1.12
HDAC4-212ENST00000495497 GRIN2DO15399 1336 aa22.05■■□□□ 1.12
HDAC4-212ENST00000495497 GSTTP1A0A1W2PQM5 241 aa22.04■■□□□ 1.12
HDAC4-212ENST00000495497 CABYRO75952 493 aa22.04■■□□□ 1.12
HDAC4-212ENST00000495497 RTP1P59025 263 aa22.04■■□□□ 1.12
HDAC4-212ENST00000495497 TRIM60Q495X7 471 aa22.04■■□□□ 1.12
HDAC4-212ENST00000495497 UTP14CQ5TAP6 766 aaKnown RBP22.04■■□□□ 1.12
HDAC4-212ENST00000495497 MCTP1Q6DN14 999 aa22.04■■□□□ 1.12
HDAC4-212ENST00000495497 KAT2BQ92831 832 aa22.04■■□□□ 1.12
HDAC4-212ENST00000495497 JPH1Q9HDC5 661 aaPredicted RBP22.04■■□□□ 1.12
HDAC4-212ENST00000495497 SLC9A2Q9UBY0 812 aa22.04■■□□□ 1.12
HDAC4-212ENST00000495497 ATP11BQ9Y2G3 1177 aa22.04■■□□□ 1.12
HDAC4-212ENST00000495497 NFASCO94856 1347 aa22.04■■□□□ 1.12
HDAC4-212ENST00000495497 ELP1O95163 1332 aa22.04■■□□□ 1.12
HDAC4-212ENST00000495497 DOCK5Q9H7D0 1870 aa22.03■■□□□ 1.12
HDAC4-212ENST00000495497 A0A0U1RQG5 324 aaPredicted RBP22.03■■□□□ 1.12
HDAC4-212ENST00000495497 KPNA6O60684 536 aa22.03■■□□□ 1.12
HDAC4-212ENST00000495497 PPFIA4O75335 1185 aa22.03■■□□□ 1.12
HDAC4-212ENST00000495497 HOXD8P13378 290 aaPredicted RBP22.03■■□□□ 1.12
HDAC4-212ENST00000495497 ITGA7Q13683 1181 aa22.03■■□□□ 1.12
HDAC4-212ENST00000495497 MOXD1Q6UVY6 613 aa22.03■■□□□ 1.12
HDAC4-212ENST00000495497 NOSTRINQ8IVI9 506 aa22.03■■□□□ 1.12
HDAC4-212ENST00000495497 PCDH10Q9P2E7 1040 aa22.03■■□□□ 1.12
HDAC4-212ENST00000495497 CCNE2O96020 404 aa22.02■■□□□ 1.12
HDAC4-212ENST00000495497 LGALS2P05162 132 aa22.02■■□□□ 1.12
HDAC4-212ENST00000495497 U2AF2P26368 475 aaKnown RBP eCLIP22.02■■□□□ 1.12
HDAC4-212ENST00000495497 SNX17Q15036 470 aa22.02■■□□□ 1.12
HDAC4-212ENST00000495497 NBPF20Q3BBV1 942 aa22.02■■□□□ 1.12
HDAC4-212ENST00000495497 PPP4R3AQ6IN85 833 aa22.02■■□□□ 1.12
HDAC4-212ENST00000495497 C7orf61Q8IZ16 206 aa22.02■■□□□ 1.12
HDAC4-212ENST00000495497 SEPT1Q8WYJ6 367 aa22.02■■□□□ 1.12
HDAC4-212ENST00000495497 C16orf70Q9BSU1 422 aa22.02■■□□□ 1.12
HDAC4-212ENST00000495497 ARVCFO00192 962 aa22.01■■□□□ 1.11
HDAC4-212ENST00000495497 EVI5O60447 810 aa22.01■■□□□ 1.11
HDAC4-212ENST00000495497 TCF7P36402 384 aaPredicted RBP22.01■■□□□ 1.11
HDAC4-212ENST00000495497 ACTR2P61160 394 aa22.01■■□□□ 1.11
HDAC4-212ENST00000495497 TRIM50Q86XT4 487 aa22.01■■□□□ 1.11
HDAC4-212ENST00000495497 POTEDQ86YR6 584 aa22.01■■□□□ 1.11
HDAC4-212ENST00000495497 ETNPPLQ8TBG4 499 aa22.01■■□□□ 1.11
HDAC4-212ENST00000495497 SLC5A5Q92911 643 aa22.01■■□□□ 1.11
HDAC4-212ENST00000495497 TBC1D22BQ9NU19 505 aa22.01■■□□□ 1.11
HDAC4-212ENST00000495497 PQBP1O60828 265 aaKnown RBP22■■□□□ 1.11
HDAC4-212ENST00000495497 GCFC2P16383 781 aaKnown RBP22■■□□□ 1.11
HDAC4-212ENST00000495497 PSEN2P49810 448 aa22■■□□□ 1.11
HDAC4-212ENST00000495497 CDK7P50613 346 aa22■■□□□ 1.11
HDAC4-212ENST00000495497 TLE2Q04725 743 aa22■■□□□ 1.11
HDAC4-212ENST00000495497 C1orf53Q5VUE5 145 aa22■■□□□ 1.11
HDAC4-212ENST00000495497 SLC43A3Q8NBI5 491 aa22■■□□□ 1.11
HDAC4-212ENST00000495497 DNAH12Q6ZR08 3092 aa22■■□□□ 1.11
HDAC4-212ENST00000495497 VPS37CA5D8V6 355 aaPredicted RBP21.99■■□□□ 1.11
HDAC4-212ENST00000495497 HSP90AA1P07900 732 aaKnown RBP21.99■■□□□ 1.11
HDAC4-212ENST00000495497 SYT1P21579 422 aa21.99■■□□□ 1.11
HDAC4-212ENST00000495497 NBR1Q14596 966 aa21.99■■□□□ 1.11
HDAC4-212ENST00000495497 MFSD10Q14728 455 aa21.99■■□□□ 1.11
HDAC4-212ENST00000495497 LRCH2Q5VUJ6 765 aa21.99■■□□□ 1.11
HDAC4-212ENST00000495497 HAS1Q92839 578 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms