RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 DUSP6Q16828 381 aa10.68□□□□□ -0.7
GARNL3-219ENST00000495172 BRDTQ58F21 947 aaPredicted RBP10.68□□□□□ -0.7
GARNL3-219ENST00000495172 LURAP1LQ8IV03 231 aa10.68□□□□□ -0.7
GARNL3-219ENST00000495172 LRRC47Q8N1G4 583 aaKnown RBP10.68□□□□□ -0.7
GARNL3-219ENST00000495172 MEIS3Q99687 375 aa10.68□□□□□ -0.7
GARNL3-219ENST00000495172 HCSTQ9UBK5 93 aa10.68□□□□□ -0.7
GARNL3-219ENST00000495172 SWAP70Q9UH65 585 aa10.68□□□□□ -0.7
GARNL3-219ENST00000495172 NR2E1Q9Y466 385 aa10.68□□□□□ -0.7
GARNL3-219ENST00000495172 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.67□□□□□ -0.7
GARNL3-219ENST00000495172 PRR5-ARHGAP8B1AHC4 643 aa10.67□□□□□ -0.7
GARNL3-219ENST00000495172 GDF9O60383 454 aa10.67□□□□□ -0.7
GARNL3-219ENST00000495172 KPNA6O60684 536 aa10.67□□□□□ -0.7
GARNL3-219ENST00000495172 KINO60870 393 aaKnown RBP10.67□□□□□ -0.7
GARNL3-219ENST00000495172 CFHP08603 1231 aa10.67□□□□□ -0.7
GARNL3-219ENST00000495172 GLULP15104 373 aa10.67□□□□□ -0.7
GARNL3-219ENST00000495172 ARHGAP8P85298 464 aa10.67□□□□□ -0.7
GARNL3-219ENST00000495172 LPAL2Q16609 132 aa10.67□□□□□ -0.7
GARNL3-219ENST00000495172 LY6KQ17RY6 165 aa10.67□□□□□ -0.7
GARNL3-219ENST00000495172 CCDC184Q52MB2 194 aa10.67□□□□□ -0.7
GARNL3-219ENST00000495172 ZC3H14Q6PJT7 736 aaKnown RBP10.67□□□□□ -0.7
GARNL3-219ENST00000495172 SLC30A10Q6XR72 485 aa10.67□□□□□ -0.7
GARNL3-219ENST00000495172 C12orf76Q8N812 135 aaPredicted RBP10.67□□□□□ -0.7
GARNL3-219ENST00000495172 ZNF689Q96CS4 500 aaPredicted RBP10.67□□□□□ -0.7
GARNL3-219ENST00000495172 ARMT1Q9H993 441 aa10.67□□□□□ -0.7
GARNL3-219ENST00000495172 CLIP2Q9UDT6 1046 aa10.67□□□□□ -0.7
GARNL3-219ENST00000495172 CA14Q9ULX7 337 aa10.67□□□□□ -0.7
GARNL3-219ENST00000495172 SUPT16HQ9Y5B9 1047 aaKnown RBP10.67□□□□□ -0.7
GARNL3-219ENST00000495172 EMSYQ7Z589 1322 aa10.66□□□□□ -0.7
GARNL3-219ENST00000495172 RAD50Q92878 1312 aa10.66□□□□□ -0.7
GARNL3-219ENST00000495172 CHGBP05060 677 aa10.66□□□□□ -0.7
GARNL3-219ENST00000495172 SPINK2P20155 84 aa10.66□□□□□ -0.7
GARNL3-219ENST00000495172 ARHGAP1Q07960 439 aa10.66□□□□□ -0.7
GARNL3-219ENST00000495172 SPEM2Q0P670 501 aa10.66□□□□□ -0.7
GARNL3-219ENST00000495172 KCNC3Q14003 757 aa10.66□□□□□ -0.7
GARNL3-219ENST00000495172 MFSD10Q14728 455 aa10.66□□□□□ -0.7
GARNL3-219ENST00000495172 KIAA0753Q2KHM9 967 aa10.66□□□□□ -0.7
GARNL3-219ENST00000495172 CRNKL1Q9BZJ0 848 aaKnown RBP10.66□□□□□ -0.7
GARNL3-219ENST00000495172 FREM2Q5SZK8 3169 aa10.65□□□□□ -0.7
GARNL3-219ENST00000495172 TMEM232C9JQI7 657 aa10.65□□□□□ -0.7
GARNL3-219ENST00000495172 NFIBO00712 420 aa10.65□□□□□ -0.7
GARNL3-219ENST00000495172 IBSPP21815 317 aaPredicted RBP10.65□□□□□ -0.7
GARNL3-219ENST00000495172 OAZ1P54368 228 aa10.65□□□□□ -0.7
GARNL3-219ENST00000495172 TNNI3KQ59H18 835 aa10.65□□□□□ -0.7
GARNL3-219ENST00000495172 CCDC158Q5M9N0 1113 aa10.65□□□□□ -0.7
GARNL3-219ENST00000495172 PLPP4Q5VZY2 271 aa10.65□□□□□ -0.7
GARNL3-219ENST00000495172 C16orf86Q6ZW13 317 aa10.65□□□□□ -0.7
GARNL3-219ENST00000495172 C1orf210Q8IVY1 113 aa10.65□□□□□ -0.7
GARNL3-219ENST00000495172 DHX37Q8IY37 1157 aaKnown RBP10.65□□□□□ -0.7
GARNL3-219ENST00000495172 TDRD5Q8NAT2 981 aaKnown RBP10.65□□□□□ -0.7
GARNL3-219ENST00000495172 CCDC17Q96LX7 622 aa10.65□□□□□ -0.7
GARNL3-219ENST00000495172 PLVAPQ9BX97 442 aa10.65□□□□□ -0.7
GARNL3-219ENST00000495172 TBC1D17Q9HA65 648 aa10.65□□□□□ -0.7
GARNL3-219ENST00000495172 DLGAP2Q9P1A6 1054 aa10.65□□□□□ -0.7
GARNL3-219ENST00000495172 FEM1BQ9UK73 627 aa10.65□□□□□ -0.7
GARNL3-219ENST00000495172 SMG5Q9UPR3 1016 aaKnown RBP10.65□□□□□ -0.7
GARNL3-219ENST00000495172 RWDD3Q9Y3V2 267 aa10.65□□□□□ -0.7
GARNL3-219ENST00000495172 FPGT-TNNI3KV9GXZ4 949 aa10.65□□□□□ -0.7
GARNL3-219ENST00000495172 TTC3P53804 2025 aa10.65□□□□□ -0.71
GARNL3-219ENST00000495172 LAMA1P25391 3075 aa10.64□□□□□ -0.71
GARNL3-219ENST00000495172 SRRM3A6NNA2 597 aaPredicted RBP10.64□□□□□ -0.71
GARNL3-219ENST00000495172 HIDE1A8MVS5 230 aa10.64□□□□□ -0.71
GARNL3-219ENST00000495172 SLC30A4O14863 429 aa10.64□□□□□ -0.71
GARNL3-219ENST00000495172 CALML3P27482 149 aa10.64□□□□□ -0.71
GARNL3-219ENST00000495172 SOWAHCQ53LP3 525 aaPredicted RBP10.64□□□□□ -0.71
GARNL3-219ENST00000495172 C12orf60Q5U649 245 aa10.64□□□□□ -0.71
GARNL3-219ENST00000495172 UNQ6494/PRO21346Q6UXR6 183 aa10.64□□□□□ -0.71
GARNL3-219ENST00000495172 SERINC5Q86VE9 423 aa10.64□□□□□ -0.71
GARNL3-219ENST00000495172 ST13P5Q8NFI4 369 aaPredicted RBP10.64□□□□□ -0.71
GARNL3-219ENST00000495172 RSAD2Q8WXG1 361 aa10.64□□□□□ -0.71
GARNL3-219ENST00000495172 LINC01599Q8WXQ3 324 aa10.64□□□□□ -0.71
GARNL3-219ENST00000495172 SSH1Q8WYL5 1049 aa10.64□□□□□ -0.71
GARNL3-219ENST00000495172 P2RX5Q93086 422 aa10.64□□□□□ -0.71
GARNL3-219ENST00000495172 CCDC8Q9H0W5 538 aaPredicted RBP10.64□□□□□ -0.71
GARNL3-219ENST00000495172 AAASQ9NRG9 546 aa10.64□□□□□ -0.71
GARNL3-219ENST00000495172 DBNLQ9UJU6 430 aaKnown RBP10.64□□□□□ -0.71
GARNL3-219ENST00000495172 PNMA6EA0A0J9YXQ4 647 aa10.63□□□□□ -0.71
GARNL3-219ENST00000495172 PTPDC1A2A3K4 754 aa10.63□□□□□ -0.71
GARNL3-219ENST00000495172 TAF4O00268 1085 aa10.63□□□□□ -0.71
GARNL3-219ENST00000495172 TREHO43280 583 aa10.63□□□□□ -0.71
GARNL3-219ENST00000495172 DGKIO75912 1065 aa10.63□□□□□ -0.71
GARNL3-219ENST00000495172 PDE4DQ08499 809 aa10.63□□□□□ -0.71
GARNL3-219ENST00000495172 IKQ13123 557 aaPredicted RBP10.63□□□□□ -0.71
GARNL3-219ENST00000495172 CCDC6Q16204 474 aa10.63□□□□□ -0.71
GARNL3-219ENST00000495172 RARS2Q5T160 578 aaKnown RBP10.63□□□□□ -0.71
GARNL3-219ENST00000495172 CCDC62Q6P9F0 684 aa10.63□□□□□ -0.71
GARNL3-219ENST00000495172 SCFD2Q8WU76 684 aa10.63□□□□□ -0.71
GARNL3-219ENST00000495172 FOXQ1Q9C009 403 aa10.63□□□□□ -0.71
GARNL3-219ENST00000495172 HECTD1Q9ULT8 2610 aa10.63□□□□□ -0.71
GARNL3-219ENST00000495172 PTPRCP08575 1304 aa10.62□□□□□ -0.71
GARNL3-219ENST00000495172 ZNF532Q9HCE3 1301 aa10.62□□□□□ -0.71
GARNL3-219ENST00000495172 HAS3O00219 553 aa10.62□□□□□ -0.71
GARNL3-219ENST00000495172 ENPP3O14638 875 aa10.62□□□□□ -0.71
GARNL3-219ENST00000495172 NKRFO15226 690 aaKnown RBP eCLIP10.62□□□□□ -0.71
GARNL3-219ENST00000495172 TOP3BO95985 862 aaKnown RBP10.62□□□□□ -0.71
GARNL3-219ENST00000495172 GHRP10912 638 aa10.62□□□□□ -0.71
GARNL3-219ENST00000495172 PDE6AP16499 860 aa10.62□□□□□ -0.71
GARNL3-219ENST00000495172 RFX1P22670 979 aa10.62□□□□□ -0.71
GARNL3-219ENST00000495172 SHC2P98077 582 aa10.62□□□□□ -0.71
GARNL3-219ENST00000495172 TBC1D8BQ0IIM8 1120 aa10.62□□□□□ -0.71
GARNL3-219ENST00000495172 TDGQ13569 410 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms