RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 FAM110CQ1W6H9 321 aa17.45■□□□□ 0.38
SHISA5-216ENST00000494854 GIMAP8Q8ND71 665 aaPredicted RBP17.45■□□□□ 0.38
SHISA5-216ENST00000494854 CCDC47Q96A33 483 aaKnown RBP17.45■□□□□ 0.38
SHISA5-216ENST00000494854 ANO3Q9BYT9 981 aa17.45■□□□□ 0.38
SHISA5-216ENST00000494854 STK17AQ9UEE5 414 aa17.45■□□□□ 0.38
SHISA5-216ENST00000494854 SRRDQ9UH36 339 aa17.45■□□□□ 0.38
SHISA5-216ENST00000494854 PTCH2Q9Y6C5 1203 aa17.45■□□□□ 0.38
SHISA5-216ENST00000494854 MEIS2O14770 477 aa17.44■□□□□ 0.38
SHISA5-216ENST00000494854 FCGRTP55899 365 aa17.44■□□□□ 0.38
SHISA5-216ENST00000494854 AP3B2Q13367 1082 aa17.44■□□□□ 0.38
SHISA5-216ENST00000494854 STIM1Q13586 685 aa17.44■□□□□ 0.38
SHISA5-216ENST00000494854 FILIP1LQ4L180 1135 aa17.44■□□□□ 0.38
SHISA5-216ENST00000494854 HAS1Q92839 578 aa17.44■□□□□ 0.38
SHISA5-216ENST00000494854 CDK5RAP3Q96JB5 506 aa17.44■□□□□ 0.38
SHISA5-216ENST00000494854 PNMA5Q96PV4 448 aa17.44■□□□□ 0.38
SHISA5-216ENST00000494854 TRMT1Q9NXH9 659 aaKnown RBP17.44■□□□□ 0.38
SHISA5-216ENST00000494854 TEX33O43247 280 aa17.43■□□□□ 0.38
SHISA5-216ENST00000494854 USP11P51784 963 aa17.43■□□□□ 0.38
SHISA5-216ENST00000494854 SPAG1Q07617 926 aa17.43■□□□□ 0.38
SHISA5-216ENST00000494854 GOLGA8FQ08AF8 430 aa17.43■□□□□ 0.38
SHISA5-216ENST00000494854 GOLGA8DPQ0D2H9 430 aa17.43■□□□□ 0.38
SHISA5-216ENST00000494854 KRT79Q5XKE5 535 aa17.43■□□□□ 0.38
SHISA5-216ENST00000494854 E4F1Q66K89 784 aaPredicted RBP17.43■□□□□ 0.38
SHISA5-216ENST00000494854 MCTP2Q6DN12 878 aa17.43■□□□□ 0.38
SHISA5-216ENST00000494854 NYAP1Q6ZVC0 841 aa17.43■□□□□ 0.38
SHISA5-216ENST00000494854 SPICE1Q8N0Z3 855 aa17.43■□□□□ 0.38
SHISA5-216ENST00000494854 SNX29Q8TEQ0 813 aa17.43■□□□□ 0.38
SHISA5-216ENST00000494854 BLOC1S4Q9NUP1 217 aa17.43■□□□□ 0.38
SHISA5-216ENST00000494854 LIMA1Q9UHB6 759 aaKnown RBP17.43■□□□□ 0.38
SHISA5-216ENST00000494854 TMX2Q9Y320 296 aa17.43■□□□□ 0.38
SHISA5-216ENST00000494854 KIAA0100Q14667 2235 aaKnown RBP17.43■□□□□ 0.38
SHISA5-216ENST00000494854 SMCHD1A6NHR9 2005 aa17.43■□□□□ 0.38
SHISA5-216ENST00000494854 MARCH6O60337 910 aa17.43■□□□□ 0.38
SHISA5-216ENST00000494854 SOX10P56693 466 aa17.43■□□□□ 0.38
SHISA5-216ENST00000494854 ASIC1P78348 528 aa17.43■□□□□ 0.38
SHISA5-216ENST00000494854 IRX3P78415 501 aaPredicted RBP17.43■□□□□ 0.38
SHISA5-216ENST00000494854 MLLT1Q03111 559 aaPredicted RBP17.43■□□□□ 0.38
SHISA5-216ENST00000494854 PTPN14Q15678 1187 aa17.43■□□□□ 0.38
SHISA5-216ENST00000494854 USH1GQ495M9 461 aa17.43■□□□□ 0.38
SHISA5-216ENST00000494854 SV2BQ7L1I2 683 aa17.43■□□□□ 0.38
SHISA5-216ENST00000494854 ANKRD13CQ8N6S4 541 aa17.43■□□□□ 0.38
SHISA5-216ENST00000494854 ACER1Q8TDN7 264 aa17.43■□□□□ 0.38
SHISA5-216ENST00000494854 STAT2P52630 851 aa17.42■□□□□ 0.38
SHISA5-216ENST00000494854 PDE4DQ08499 809 aa17.42■□□□□ 0.38
SHISA5-216ENST00000494854 KRT31Q15323 416 aa17.42■□□□□ 0.38
SHISA5-216ENST00000494854 LARP4BQ92615 738 aaKnown RBP17.42■□□□□ 0.38
SHISA5-216ENST00000494854 P2RX7Q99572 595 aaKnown RBP17.42■□□□□ 0.38
SHISA5-216ENST00000494854 FEZ1Q99689 392 aa17.42■□□□□ 0.38
SHISA5-216ENST00000494854 GOPCQ9HD26 462 aa17.42■□□□□ 0.38
SHISA5-216ENST00000494854 EXOC1Q9NV70 894 aa17.42■□□□□ 0.38
SHISA5-216ENST00000494854 MORF4L1Q9UBU8 362 aa17.42■□□□□ 0.38
SHISA5-216ENST00000494854 PRR12Q9ULL5 1215 aa17.42■□□□□ 0.38
SHISA5-216ENST00000494854 DOCK3Q8IZD9 2030 aa17.42■□□□□ 0.38
SHISA5-216ENST00000494854 CYP3A7-CYP3A51PA0A087WV96 503 aa17.41■□□□□ 0.38
SHISA5-216ENST00000494854 TRIM49BA6NDI0 452 aa17.41■□□□□ 0.38
SHISA5-216ENST00000494854 LRRC10BA6NIK2 292 aa17.41■□□□□ 0.38
SHISA5-216ENST00000494854 PSMA7O14818 248 aa17.41■□□□□ 0.38
SHISA5-216ENST00000494854 CYP3A7P24462 503 aa17.41■□□□□ 0.38
SHISA5-216ENST00000494854 PBX1P40424 430 aa17.41■□□□□ 0.38
SHISA5-216ENST00000494854 SLC9C1Q4G0N8 1177 aa17.41■□□□□ 0.38
SHISA5-216ENST00000494854 TCP11X2Q5H9J9 407 aa17.41■□□□□ 0.38
SHISA5-216ENST00000494854 MOXD1Q6UVY6 613 aa17.41■□□□□ 0.38
SHISA5-216ENST00000494854 TC2NQ8N9U0 490 aa17.41■□□□□ 0.38
SHISA5-216ENST00000494854 ANKRD20A12PQ8NF67 263 aa17.41■□□□□ 0.38
SHISA5-216ENST00000494854 GTF3C2Q8WUA4 911 aaPredicted RBP17.41■□□□□ 0.38
SHISA5-216ENST00000494854 ZNF333Q96JL9 665 aa17.41■□□□□ 0.38
SHISA5-216ENST00000494854 NUDT12Q9BQG2 462 aa17.41■□□□□ 0.38
SHISA5-216ENST00000494854 GTPBP4Q9BZE4 634 aaKnown RBP17.41■□□□□ 0.38
SHISA5-216ENST00000494854 PCDHA12Q9UN75 941 aa17.41■□□□□ 0.38
SHISA5-216ENST00000494854 KCNJ18B7U540 433 aa17.41■□□□□ 0.38
SHISA5-216ENST00000494854 KCNJ12Q14500 433 aa17.41■□□□□ 0.38
SHISA5-216ENST00000494854 MCM6Q14566 821 aa17.41■□□□□ 0.38
SHISA5-216ENST00000494854 TMEM119Q4V9L6 283 aa17.41■□□□□ 0.38
SHISA5-216ENST00000494854 KIAA1755Q5JYT7 1200 aa17.41■□□□□ 0.38
SHISA5-216ENST00000494854 CEP135Q66GS9 1140 aa17.41■□□□□ 0.38
SHISA5-216ENST00000494854 TMEM139Q8IV31 216 aa17.41■□□□□ 0.38
SHISA5-216ENST00000494854 RAD54LQ92698 747 aa17.41■□□□□ 0.38
SHISA5-216ENST00000494854 DHTKD1Q96HY7 919 aaPredicted RBP17.41■□□□□ 0.38
SHISA5-216ENST00000494854 MBOAT7Q96N66 472 aa17.41■□□□□ 0.38
SHISA5-216ENST00000494854 DYNC1I1O14576 645 aa17.4■□□□□ 0.38
SHISA5-216ENST00000494854 FOSP01100 380 aaPredicted RBP17.4■□□□□ 0.38
SHISA5-216ENST00000494854 GTF2F1P35269 517 aaKnown RBP eCLIP17.4■□□□□ 0.38
SHISA5-216ENST00000494854 CCT6AP40227 531 aaKnown RBP17.4■□□□□ 0.38
SHISA5-216ENST00000494854 ADKP55263 362 aaKnown RBP17.4■□□□□ 0.38
SHISA5-216ENST00000494854 HERVK_113P62684 666 aa17.4■□□□□ 0.38
SHISA5-216ENST00000494854 CRYGNQ8WXF5 182 aa17.4■□□□□ 0.38
SHISA5-216ENST00000494854 GJA10Q969M2 543 aa17.4■□□□□ 0.38
SHISA5-216ENST00000494854 PPP1R13BQ96KQ4 1090 aa17.4■□□□□ 0.38
SHISA5-216ENST00000494854 KCNMB3Q9NPA1 279 aa17.4■□□□□ 0.38
SHISA5-216ENST00000494854 MYPNQ86TC9 1320 aa17.4■□□□□ 0.38
SHISA5-216ENST00000494854 RBBP6Q7Z6E9 1792 aaKnown RBP17.4■□□□□ 0.38
SHISA5-216ENST00000494854 SPDYE3A6NKU9 549 aa17.39■□□□□ 0.37
SHISA5-216ENST00000494854 PPP1R2P41236 205 aa17.39■□□□□ 0.37
SHISA5-216ENST00000494854 COPB1P53618 953 aaKnown RBP17.39■□□□□ 0.37
SHISA5-216ENST00000494854 PMS1P54277 932 aaKnown RBP17.39■□□□□ 0.37
SHISA5-216ENST00000494854 ARHGAP4P98171 946 aa17.39■□□□□ 0.37
SHISA5-216ENST00000494854 STK4Q13043 487 aa17.39■□□□□ 0.37
SHISA5-216ENST00000494854 FAM83BQ5T0W9 1011 aa17.39■□□□□ 0.37
SHISA5-216ENST00000494854 CNNM4Q6P4Q7 775 aa17.39■□□□□ 0.37
SHISA5-216ENST00000494854 BAG1Q99933 345 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms