RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 B4DLN1 442 aa13.59□□□□□ -0.23
CSNK1E-212ENST00000494610 TREHO43280 583 aa13.59□□□□□ -0.23
CSNK1E-212ENST00000494610 EIF3JO75822 258 aaKnown RBP13.59□□□□□ -0.23
CSNK1E-212ENST00000494610 GGPS1O95749 300 aa13.59□□□□□ -0.23
CSNK1E-212ENST00000494610 MRPL12P52815 198 aaKnown RBP13.59□□□□□ -0.23
CSNK1E-212ENST00000494610 HTRA4P83105 476 aaPredicted RBP13.59□□□□□ -0.23
CSNK1E-212ENST00000494610 NECTIN1Q15223 517 aa13.59□□□□□ -0.23
CSNK1E-212ENST00000494610 CLUL1Q15846 466 aa13.59□□□□□ -0.23
CSNK1E-212ENST00000494610 SLC35G1Q2M3R5 365 aa13.59□□□□□ -0.23
CSNK1E-212ENST00000494610 TCEAL5Q5H9L2 206 aa13.59□□□□□ -0.23
CSNK1E-212ENST00000494610 GPATCH4Q5T3I0 446 aaKnown RBP13.59□□□□□ -0.23
CSNK1E-212ENST00000494610 MYSM1Q5VVJ2 828 aa13.59□□□□□ -0.23
CSNK1E-212ENST00000494610 ENAHQ8N8S7 591 aaPredicted RBP13.59□□□□□ -0.23
CSNK1E-212ENST00000494610 PPTC7Q8NI37 304 aa13.59□□□□□ -0.23
CSNK1E-212ENST00000494610 SPATA33Q96N06 139 aa13.59□□□□□ -0.23
CSNK1E-212ENST00000494610 IWS1Q96ST2 819 aa13.59□□□□□ -0.23
CSNK1E-212ENST00000494610 C16orf70Q9BSU1 422 aa13.59□□□□□ -0.23
CSNK1E-212ENST00000494610 KAT14Q9H8E8 782 aa13.59□□□□□ -0.23
CSNK1E-212ENST00000494610 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.58□□□□□ -0.24
CSNK1E-212ENST00000494610 RSPH10B2B2RC85 870 aa13.58□□□□□ -0.24
CSNK1E-212ENST00000494610 HMGB1P09429 215 aaKnown RBP13.58□□□□□ -0.24
CSNK1E-212ENST00000494610 RSPH10BP0C881 870 aa13.58□□□□□ -0.24
CSNK1E-212ENST00000494610 PCP11498 1178 aaKnown RBP13.58□□□□□ -0.24
CSNK1E-212ENST00000494610 LAMC2Q13753 1193 aa13.58□□□□□ -0.24
CSNK1E-212ENST00000494610 TSGA10IPQ3SY00 556 aa13.58□□□□□ -0.24
CSNK1E-212ENST00000494610 CELF3Q5SZQ8 465 aaKnown RBP13.58□□□□□ -0.24
CSNK1E-212ENST00000494610 CREB3L3Q68CJ9 461 aa13.58□□□□□ -0.24
CSNK1E-212ENST00000494610 SERINC5Q86VE9 423 aa13.58□□□□□ -0.24
CSNK1E-212ENST00000494610 DGKHQ86XP1 1220 aa13.58□□□□□ -0.24
CSNK1E-212ENST00000494610 NEK9Q8TD19 979 aa13.58□□□□□ -0.24
CSNK1E-212ENST00000494610 ESR2Q92731 530 aa13.58□□□□□ -0.24
CSNK1E-212ENST00000494610 KCNB2Q92953 911 aa13.58□□□□□ -0.24
CSNK1E-212ENST00000494610 EMID1Q96A84 441 aaPredicted RBP13.58□□□□□ -0.24
CSNK1E-212ENST00000494610 MRPL38Q96DV4 380 aaKnown RBP13.58□□□□□ -0.24
CSNK1E-212ENST00000494610 ZSCAN10Q96SZ4 725 aaPredicted RBP13.58□□□□□ -0.24
CSNK1E-212ENST00000494610 PDCD2LQ9BRP1 358 aa13.58□□□□□ -0.24
CSNK1E-212ENST00000494610 ZSWIM5Q9P217 1185 aa13.58□□□□□ -0.24
CSNK1E-212ENST00000494610 RBM19Q9Y4C8 960 aaKnown RBP13.58□□□□□ -0.24
CSNK1E-212ENST00000494610 ARIH1Q9Y4X5 557 aaPredicted RBP13.58□□□□□ -0.24
CSNK1E-212ENST00000494610 INSL6Q9Y581 213 aa13.58□□□□□ -0.24
CSNK1E-212ENST00000494610 NLRC5Q86WI3 1866 aa13.58□□□□□ -0.24
CSNK1E-212ENST00000494610 PRR33A8MZF0 331 aa13.57□□□□□ -0.24
CSNK1E-212ENST00000494610 ZNF213O14771 459 aa13.57□□□□□ -0.24
CSNK1E-212ENST00000494610 SLC27A2O14975 620 aa13.57□□□□□ -0.24
CSNK1E-212ENST00000494610 ST18O60284 1047 aa13.57□□□□□ -0.24
CSNK1E-212ENST00000494610 AMHP03971 560 aa13.57□□□□□ -0.24
CSNK1E-212ENST00000494610 UBA1P22314 1058 aaKnown RBP13.57□□□□□ -0.24
CSNK1E-212ENST00000494610 HSD17B4P51659 736 aa13.57□□□□□ -0.24
CSNK1E-212ENST00000494610 DLX2Q07687 328 aaPredicted RBP13.57□□□□□ -0.24
CSNK1E-212ENST00000494610 GPM6BQ13491 265 aa13.57□□□□□ -0.24
CSNK1E-212ENST00000494610 PLEKHG4Q58EX7 1191 aa13.57□□□□□ -0.24
CSNK1E-212ENST00000494610 TRIM50Q86XT4 487 aa13.57□□□□□ -0.24
CSNK1E-212ENST00000494610 MCF2L2Q86YR7 1114 aa13.57□□□□□ -0.24
CSNK1E-212ENST00000494610 SP7Q8TDD2 431 aaPredicted RBP13.57□□□□□ -0.24
CSNK1E-212ENST00000494610 ATP6V0A1Q93050 837 aa13.57□□□□□ -0.24
CSNK1E-212ENST00000494610 RNF41Q9H4P4 317 aaPredicted RBP13.57□□□□□ -0.24
CSNK1E-212ENST00000494610 PNMA2Q9UL42 364 aa13.57□□□□□ -0.24
CSNK1E-212ENST00000494610 MRPL11Q9Y3B7 192 aaKnown RBP13.57□□□□□ -0.24
CSNK1E-212ENST00000494610 CFAP54Q96N23 3096 aa13.57□□□□□ -0.24
CSNK1E-212ENST00000494610 MYO15AQ9UKN7 3530 aa13.56□□□□□ -0.24
CSNK1E-212ENST00000494610 DMDP11532 3685 aa13.56□□□□□ -0.24
CSNK1E-212ENST00000494610 C17orf102A2RUQ5 167 aa13.56□□□□□ -0.24
CSNK1E-212ENST00000494610 PARP1P09874 1014 aaKnown RBP13.56□□□□□ -0.24
CSNK1E-212ENST00000494610 SMIM10L2AP0DMW4 78 aa13.56□□□□□ -0.24
CSNK1E-212ENST00000494610 SMIM10L2BP0DMW5 78 aa13.56□□□□□ -0.24
CSNK1E-212ENST00000494610 HOXD8P13378 290 aaPredicted RBP13.56□□□□□ -0.24
CSNK1E-212ENST00000494610 GTF2F1P35269 517 aaKnown RBP eCLIP13.56□□□□□ -0.24
CSNK1E-212ENST00000494610 LTBRP36941 435 aa13.56□□□□□ -0.24
CSNK1E-212ENST00000494610 TRDNQ13061 729 aa13.56□□□□□ -0.24
CSNK1E-212ENST00000494610 BECN1Q14457 450 aa13.56□□□□□ -0.24
CSNK1E-212ENST00000494610 PGM5Q15124 567 aa13.56□□□□□ -0.24
CSNK1E-212ENST00000494610 FCHSD1Q86WN1 690 aa13.56□□□□□ -0.24
CSNK1E-212ENST00000494610 TMEM192Q8IY95 271 aa13.56□□□□□ -0.24
CSNK1E-212ENST00000494610 BANK1Q8NDB2 785 aa13.56□□□□□ -0.24
CSNK1E-212ENST00000494610 YME1L1Q96TA2 773 aa13.56□□□□□ -0.24
CSNK1E-212ENST00000494610 KATNAL1Q9BW62 490 aa13.56□□□□□ -0.24
CSNK1E-212ENST00000494610 TM6SF1Q9BZW5 370 aa13.56□□□□□ -0.24
CSNK1E-212ENST00000494610 RNPEPQ9H4A4 650 aa13.56□□□□□ -0.24
CSNK1E-212ENST00000494610 SENP2Q9HC62 589 aa13.56□□□□□ -0.24
CSNK1E-212ENST00000494610 SETD4Q9NVD3 440 aa13.56□□□□□ -0.24
CSNK1E-212ENST00000494610 H3BNC9 293 aa13.55□□□□□ -0.24
CSNK1E-212ENST00000494610 PPFIA4O75335 1185 aa13.55□□□□□ -0.24
CSNK1E-212ENST00000494610 PARNO95453 639 aaKnown RBP13.55□□□□□ -0.24
CSNK1E-212ENST00000494610 MCM2P49736 904 aa13.55□□□□□ -0.24
CSNK1E-212ENST00000494610 ASPRV1Q53RT3 343 aa13.55□□□□□ -0.24
CSNK1E-212ENST00000494610 CYB5R4Q7L1T6 521 aa13.55□□□□□ -0.24
CSNK1E-212ENST00000494610 RALYLQ86SE5 291 aaKnown RBP13.55□□□□□ -0.24
CSNK1E-212ENST00000494610 VSIG10LQ86VR7 867 aa13.55□□□□□ -0.24
CSNK1E-212ENST00000494610 HOMER1Q86YM7 354 aa13.55□□□□□ -0.24
CSNK1E-212ENST00000494610 TOP1MTQ969P6 601 aa13.55□□□□□ -0.24
CSNK1E-212ENST00000494610 FBXL18Q96ME1 805 aa13.55□□□□□ -0.24
CSNK1E-212ENST00000494610 PHOX2BQ99453 314 aa13.55□□□□□ -0.24
CSNK1E-212ENST00000494610 CNNM2Q9H8M5 875 aa13.55□□□□□ -0.24
CSNK1E-212ENST00000494610 CLDND1Q9NY35 253 aa13.55□□□□□ -0.24
CSNK1E-212ENST00000494610 SNX14Q9Y5W7 946 aa13.55□□□□□ -0.24
CSNK1E-212ENST00000494610 ZNF318Q5VUA4 2279 aa13.54□□□□□ -0.24
CSNK1E-212ENST00000494610 H3BRB1 525 aa13.54□□□□□ -0.24
CSNK1E-212ENST00000494610 GRM6O15303 877 aa13.54□□□□□ -0.24
CSNK1E-212ENST00000494610 LINC01565O15544 149 aa13.54□□□□□ -0.24
CSNK1E-212ENST00000494610 EFCAB14O75071 495 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms