RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 WDR70Q9NW82 654 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 CEP152O94986 1710 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 PEX3P56589 373 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 ARHGAP4P98171 946 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 GABPAQ06546 454 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 C7orf31Q8N865 590 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.74□□□□□ -0.37
COL25A1-204ENST00000494183 GABPB2Q8TAK5 448 aaPredicted RBP12.74□□□□□ -0.37
COL25A1-204ENST00000494183 RWDD2AQ9UIY3 292 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 PNMA3Q9UL41 463 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 ODF2LQ9ULJ1 636 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 PTPRMP28827 1452 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 CSF1RP07333 972 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 MTMR1Q13613 665 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 MAP7D1Q3KQU3 841 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 C12orf60Q5U649 245 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 STOX1Q6ZVD7 989 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 ZBTB33Q86T24 672 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 TAB3Q8N5C8 712 aaPredicted RBP12.74□□□□□ -0.37
COL25A1-204ENST00000494183 PRPF38AQ8NAV1 312 aaKnown RBP12.74□□□□□ -0.37
COL25A1-204ENST00000494183 NLRP7Q8WX94 980 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 TBC1D31Q96DN5 1066 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 DPH5Q9H2P9 285 aa12.74□□□□□ -0.37
COL25A1-204ENST00000494183 FAM49AQ9H0Q0 323 aaPredicted RBP12.73□□□□□ -0.37
COL25A1-204ENST00000494183 CD2APQ9Y5K6 639 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 PTPRUQ92729 1446 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 LMTK2Q8IWU2 1503 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 GOLGA8IPA6NC78 632 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 GOLGA8JA6NMD2 632 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 ADCY8P40145 1251 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 SF3A3Q12874 501 aaKnown RBP eCLIP12.73□□□□□ -0.37
COL25A1-204ENST00000494183 PSMD2Q13200 908 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 PPP2R5CQ13362 524 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 KAZNQ674X7 775 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 SGMS1Q86VZ5 419 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 SMC1BQ8NDV3 1235 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 ANKRD36BP1Q96IX9 119 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 CRAMP1Q96RY5 1269 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 RNF146Q9NTX7 359 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 TMEM260Q9NX78 707 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 GCNT4Q9P109 453 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 ZNF148Q9UQR1 794 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 SPATA31A6Q5VVP1 1343 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 NFX1Q12986 1120 aaKnown RBP12.73□□□□□ -0.37
COL25A1-204ENST00000494183 EP400NLQ6ZTU2 488 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 NDST4Q9H3R1 872 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 PNPLA7Q6ZV29 1317 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 GFPT2O94808 682 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 CUL4BQ13620 913 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 LGSNQ5TDP6 509 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 SLC35F6Q8N357 371 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 MICALL1Q8N3F8 863 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 STAG2Q8N3U4 1231 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 C2orf69Q8N8R5 385 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 FAM133AQ8N9E0 248 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 ZBTB12Q9Y330 459 aaPredicted RBP12.73□□□□□ -0.37
COL25A1-204ENST00000494183 WDR19Q8NEZ3 1342 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 STK36Q9NRP7 1315 aa12.73□□□□□ -0.37
COL25A1-204ENST00000494183 LMNB1P20700 586 aa12.72□□□□□ -0.37
COL25A1-204ENST00000494183 QRICH2Q9H0J4 1663 aa12.72□□□□□ -0.37
COL25A1-204ENST00000494183 GRM4Q14833 912 aa12.72□□□□□ -0.37
COL25A1-204ENST00000494183 STXBP2Q15833 593 aa12.72□□□□□ -0.37
COL25A1-204ENST00000494183 RSRC2Q7L4I2 434 aaKnown RBP12.72□□□□□ -0.37
COL25A1-204ENST00000494183 OTUD5Q96G74 571 aa12.72□□□□□ -0.37
COL25A1-204ENST00000494183 UBE2TQ9NPD8 197 aaPredicted RBP12.72□□□□□ -0.37
COL25A1-204ENST00000494183 FBXO40Q9UH90 709 aa12.72□□□□□ -0.37
COL25A1-204ENST00000494183 DAGLAQ9Y4D2 1042 aa12.72□□□□□ -0.37
COL25A1-204ENST00000494183 SETBP1Q9Y6X0 1596 aa12.72□□□□□ -0.37
COL25A1-204ENST00000494183 GOLGA8SH3BPF8 625 aa12.72□□□□□ -0.37
COL25A1-204ENST00000494183 CYP27A1Q02318 531 aa12.72□□□□□ -0.37
COL25A1-204ENST00000494183 PPP2R5EQ16537 467 aa12.72□□□□□ -0.37
COL25A1-204ENST00000494183 DENND2CQ68D51 928 aa12.72□□□□□ -0.37
COL25A1-204ENST00000494183 CAPN12Q6ZSI9 719 aa12.72□□□□□ -0.37
COL25A1-204ENST00000494183 INTS8Q75QN2 995 aaKnown RBP12.72□□□□□ -0.37
COL25A1-204ENST00000494183 CROCCP2Q86T23 111 aa12.72□□□□□ -0.37
COL25A1-204ENST00000494183 ADGRF4Q8IZF3 695 aa12.72□□□□□ -0.37
COL25A1-204ENST00000494183 ZNF653Q96CK0 615 aa12.72□□□□□ -0.37
COL25A1-204ENST00000494183 RFX7Q2KHR2 1363 aa12.71□□□□□ -0.37
COL25A1-204ENST00000494183 E9PMD0 336 aa12.71□□□□□ -0.37
COL25A1-204ENST00000494183 THAP12O43422 761 aa12.71□□□□□ -0.37
COL25A1-204ENST00000494183 ORC4O43929 436 aa12.71□□□□□ -0.37
COL25A1-204ENST00000494183 RCAN1P53805 252 aa12.71□□□□□ -0.37
COL25A1-204ENST00000494183 PPFIA1Q13136 1202 aa12.71□□□□□ -0.37
COL25A1-204ENST00000494183 HHATQ5VTY9 493 aa12.71□□□□□ -0.37
COL25A1-204ENST00000494183 RESP18Q5W5W9 173 aa12.71□□□□□ -0.37
COL25A1-204ENST00000494183 THNSL1Q8IYQ7 743 aa12.71□□□□□ -0.37
COL25A1-204ENST00000494183 UHMK1Q8TAS1 419 aaKnown RBP12.71□□□□□ -0.37
COL25A1-204ENST00000494183 CCDC110Q8TBZ0 833 aa12.71□□□□□ -0.37
COL25A1-204ENST00000494183 NSUN6Q8TEA1 469 aaKnown RBP12.71□□□□□ -0.37
COL25A1-204ENST00000494183 BCL2L12Q9HB09 334 aa12.71□□□□□ -0.37
COL25A1-204ENST00000494183 HERC5Q9UII4 1024 aaKnown RBP12.71□□□□□ -0.37
COL25A1-204ENST00000494183 FEM1BQ9UK73 627 aa12.71□□□□□ -0.37
COL25A1-204ENST00000494183 CPS1P31327 1500 aa12.71□□□□□ -0.37
COL25A1-204ENST00000494183 GIPC1O14908 333 aa12.71□□□□□ -0.37
COL25A1-204ENST00000494183 ZNF500O60304 480 aaPredicted RBP12.71□□□□□ -0.37
COL25A1-204ENST00000494183 BARHL2Q9NY43 387 aa12.71□□□□□ -0.37
COL25A1-204ENST00000494183 CD58P19256 250 aa12.71□□□□□ -0.38
COL25A1-204ENST00000494183 MAN1A1P33908 653 aa12.71□□□□□ -0.38
COL25A1-204ENST00000494183 ZBED6P86452 979 aa12.71□□□□□ -0.38
COL25A1-204ENST00000494183 LRRC63Q05C16 580 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms