RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 UTP14CQ5TAP6 766 aaKnown RBP16.81■□□□□ 0.28
ATG4B-224ENST00000494132 METTL7BQ6UX53 244 aa16.81■□□□□ 0.28
ATG4B-224ENST00000494132 C16orf59Q7L2K0 433 aa16.81■□□□□ 0.28
ATG4B-224ENST00000494132 TRIM50Q86XT4 487 aa16.81■□□□□ 0.28
ATG4B-224ENST00000494132 TMEM199Q8N511 208 aa16.81■□□□□ 0.28
ATG4B-224ENST00000494132 GPRASP2Q96D09 838 aa16.81■□□□□ 0.28
ATG4B-224ENST00000494132 RNPC3Q96LT9 517 aaKnown RBP16.81■□□□□ 0.28
ATG4B-224ENST00000494132 AIFM3Q96NN9 605 aa16.81■□□□□ 0.28
ATG4B-224ENST00000494132 GPR20Q99678 358 aa16.81■□□□□ 0.28
ATG4B-224ENST00000494132 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.81■□□□□ 0.286e-52■□□□□ 10.4
ATG4B-224ENST00000494132 C16orf70Q9BSU1 422 aa16.81■□□□□ 0.28
ATG4B-224ENST00000494132 SEZ6LQ9BYH1 1024 aa16.81■□□□□ 0.28
ATG4B-224ENST00000494132 ZMYND12Q9H0C1 365 aa16.81■□□□□ 0.28
ATG4B-224ENST00000494132 JADE2Q9NQC1 790 aa16.81■□□□□ 0.28
ATG4B-224ENST00000494132 NOD1Q9Y239 953 aa16.81■□□□□ 0.28
ATG4B-224ENST00000494132 MYH9P35579 1960 aaKnown RBP16.8■□□□□ 0.28
ATG4B-224ENST00000494132 PPFIA4O75335 1185 aa16.8■□□□□ 0.28
ATG4B-224ENST00000494132 LARGE1O95461 756 aa16.8■□□□□ 0.28
ATG4B-224ENST00000494132 KCNA2P16389 499 aa16.8■□□□□ 0.28
ATG4B-224ENST00000494132 ZNF200P98182 395 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-224ENST00000494132 SSRP1Q08945 709 aaKnown RBP16.8■□□□□ 0.28
ATG4B-224ENST00000494132 AP3B2Q13367 1082 aa16.8■□□□□ 0.28
ATG4B-224ENST00000494132 PPIGQ13427 754 aaKnown RBP eCLIP16.8■□□□□ 0.282e-15■□□□□ 10.9
ATG4B-224ENST00000494132 HIC1Q14526 733 aa16.8■□□□□ 0.28
ATG4B-224ENST00000494132 TRIM22Q8IYM9 498 aa16.8■□□□□ 0.28
ATG4B-224ENST00000494132 C7orf31Q8N865 590 aa16.8■□□□□ 0.28
ATG4B-224ENST00000494132 CCDC12Q8WUD4 166 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-224ENST00000494132 CTAGE1Q96RT6 745 aa16.8■□□□□ 0.28
ATG4B-224ENST00000494132 MXRA8Q9BRK3 442 aa16.8■□□□□ 0.28
ATG4B-224ENST00000494132 KATNAL1Q9BW62 490 aa16.8■□□□□ 0.28
ATG4B-224ENST00000494132 C6orf50Q9HD87 102 aa16.8■□□□□ 0.28
ATG4B-224ENST00000494132 ESYT2A0FGR8 921 aa16.79■□□□□ 0.28
ATG4B-224ENST00000494132 HAS3O00219 553 aa16.79■□□□□ 0.28
ATG4B-224ENST00000494132 FOSP01100 380 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-224ENST00000494132 SUPT20HL2P0C7V6 817 aa16.79■□□□□ 0.28
ATG4B-224ENST00000494132 ARP10275 920 aa16.79■□□□□ 0.28
ATG4B-224ENST00000494132 ZNF76P36508 570 aa16.79■□□□□ 0.28
ATG4B-224ENST00000494132 SREBF1P36956 1147 aa16.79■□□□□ 0.28
ATG4B-224ENST00000494132 PTPN11Q06124 597 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-224ENST00000494132 Q7L0L9 218 aa16.79■□□□□ 0.28
ATG4B-224ENST00000494132 REXO1Q8N1G1 1221 aaKnown RBP16.79■□□□□ 0.28
ATG4B-224ENST00000494132 CCDC148Q8NFR7 591 aa16.79■□□□□ 0.28
ATG4B-224ENST00000494132 SLKQ9H2G2 1235 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-224ENST00000494132 KCNH7Q9NS40 1196 aa16.79■□□□□ 0.28
ATG4B-224ENST00000494132 GTF2IRD1Q9UHL9 959 aa16.79■□□□□ 0.28
ATG4B-224ENST00000494132 MYO9BQ13459 2157 aa16.78■□□□□ 0.28
ATG4B-224ENST00000494132 H3BRB1 525 aa16.78■□□□□ 0.28
ATG4B-224ENST00000494132 DDX39AO00148 427 aaKnown RBP16.78■□□□□ 0.28
ATG4B-224ENST00000494132 NEK4P51957 841 aa16.78■□□□□ 0.28
ATG4B-224ENST00000494132 ARHGAP4P98171 946 aa16.78■□□□□ 0.28
ATG4B-224ENST00000494132 TMEM240Q5SV17 173 aa16.78■□□□□ 0.28
ATG4B-224ENST00000494132 ZNF365Q70YC5 407 aa16.78■□□□□ 0.28
ATG4B-224ENST00000494132 DEFB128Q7Z7B8 93 aa16.78■□□□□ 0.28
ATG4B-224ENST00000494132 NECAB1Q8N987 351 aa16.78■□□□□ 0.28
ATG4B-224ENST00000494132 SENP7Q9BQF6 1050 aa16.78■□□□□ 0.28
ATG4B-224ENST00000494132 GLT8D2Q9H1C3 349 aa16.78■□□□□ 0.28
ATG4B-224ENST00000494132 TUT1Q9H6E5 874 aaKnown RBP16.78■□□□□ 0.28
ATG4B-224ENST00000494132 IL23AQ9NPF7 189 aa16.78■□□□□ 0.28
ATG4B-224ENST00000494132 PTPRSQ13332 1948 aa16.78■□□□□ 0.28
ATG4B-224ENST00000494132 LOXHD1Q8IVV2 1947 aa16.78■□□□□ 0.28
ATG4B-224ENST00000494132 FAM86B1E9PN63 330 aa16.77■□□□□ 0.28
ATG4B-224ENST00000494132 PFKFB2O60825 505 aa16.77■□□□□ 0.28
ATG4B-224ENST00000494132 DEXIO95424 95 aa16.77■□□□□ 0.28
ATG4B-224ENST00000494132 FAM86B2P0C5J1 330 aa16.77■□□□□ 0.28
ATG4B-224ENST00000494132 GNA11P29992 359 aa16.77■□□□□ 0.28
ATG4B-224ENST00000494132 TCF7P36402 384 aaPredicted RBP16.77■□□□□ 0.28
ATG4B-224ENST00000494132 NLRP5P59047 1200 aa16.77■□□□□ 0.28
ATG4B-224ENST00000494132 CEP55Q53EZ4 464 aa16.77■□□□□ 0.28
ATG4B-224ENST00000494132 CPLX2Q6PUV4 134 aaKnown RBP16.77■□□□□ 0.28
ATG4B-224ENST00000494132 SESTD1Q86VW0 696 aa16.77■□□□□ 0.28
ATG4B-224ENST00000494132 DHX38Q92620 1227 aaKnown RBP16.77■□□□□ 0.28
ATG4B-224ENST00000494132 WNT8BQ93098 351 aa16.77■□□□□ 0.28
ATG4B-224ENST00000494132 CDHR1Q96JP9 859 aa16.77■□□□□ 0.28
ATG4B-224ENST00000494132 GSTTP1A0A1W2PQM5 241 aa16.76■□□□□ 0.27
ATG4B-224ENST00000494132 SMIM10L2AP0DMW4 78 aa16.76■□□□□ 0.27
ATG4B-224ENST00000494132 SMIM10L2BP0DMW5 78 aa16.76■□□□□ 0.27
ATG4B-224ENST00000494132 ITGB3BPQ13352 177 aaPredicted RBP16.76■□□□□ 0.27
ATG4B-224ENST00000494132 ME3Q16798 604 aa16.76■□□□□ 0.27
ATG4B-224ENST00000494132 FAM109BQ6ICB4 259 aaPredicted RBP16.76■□□□□ 0.27
ATG4B-224ENST00000494132 OTOP2Q7RTS6 562 aa16.76■□□□□ 0.27
ATG4B-224ENST00000494132 GIMAP8Q8ND71 665 aaPredicted RBP16.76■□□□□ 0.27
ATG4B-224ENST00000494132 VWCEQ96DN2 955 aa16.76■□□□□ 0.27
ATG4B-224ENST00000494132 IL17RAQ96F46 866 aa16.76■□□□□ 0.27
ATG4B-224ENST00000494132 GJB4Q9NTQ9 266 aa16.76■□□□□ 0.27
ATG4B-224ENST00000494132 EVPLQ92817 2033 aa16.75■□□□□ 0.27
ATG4B-224ENST00000494132 SIP14410 1827 aa16.75■□□□□ 0.27
ATG4B-224ENST00000494132 GRXCR1A8MXD5 290 aa16.75■□□□□ 0.27
ATG4B-224ENST00000494132 CTDNEP1O95476 244 aa16.75■□□□□ 0.27
ATG4B-224ENST00000494132 MARK3P27448 753 aa16.75■□□□□ 0.27
ATG4B-224ENST00000494132 ANKRD1Q15327 319 aa16.75■□□□□ 0.27
ATG4B-224ENST00000494132 PSRC1Q6PGN9 363 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-224ENST00000494132 PLA2G4DQ86XP0 818 aa16.75■□□□□ 0.27
ATG4B-224ENST00000494132 RETREG2Q8NC44 543 aa16.75■□□□□ 0.27
ATG4B-224ENST00000494132 CRYGNQ8WXF5 182 aa16.75■□□□□ 0.27
ATG4B-224ENST00000494132 FAM161BQ96MY7 647 aa16.75■□□□□ 0.27
ATG4B-224ENST00000494132 AGO4Q9HCK5 861 aaKnown RBP16.75■□□□□ 0.27
ATG4B-224ENST00000494132 JPH1Q9HDC5 661 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-224ENST00000494132 CXXC1Q9P0U4 656 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-224ENST00000494132 KCNJ14Q9UNX9 436 aa16.75■□□□□ 0.27
ATG4B-224ENST00000494132 IGLV3-22A0A075B6J6 115 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms