RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 LRRC8DQ7L1W4 858 aa15.42■□□□□ 0.06
CTDSP1-212ENST00000494067 FANCBQ8NB91 859 aa15.42■□□□□ 0.06
CTDSP1-212ENST00000494067 PPM1EQ8WY54 764 aa15.42■□□□□ 0.06
CTDSP1-212ENST00000494067 NEK1Q96PY6 1258 aa15.42■□□□□ 0.06
CTDSP1-212ENST00000494067 OSBPL7Q9BZF2 842 aa15.42■□□□□ 0.06
CTDSP1-212ENST00000494067 FAM217BQ9NTX9 383 aaPredicted RBP15.42■□□□□ 0.06
CTDSP1-212ENST00000494067 A0A0C4DFX4 3053 aa15.42■□□□□ 0.06
CTDSP1-212ENST00000494067 SPATA31C2B4DYI2 1134 aa15.41■□□□□ 0.06
CTDSP1-212ENST00000494067 FIBPO43427 364 aa15.41■□□□□ 0.06
CTDSP1-212ENST00000494067 NBNO60934 754 aa15.41■□□□□ 0.06
CTDSP1-212ENST00000494067 CDC45O75419 566 aa15.41■□□□□ 0.06
CTDSP1-212ENST00000494067 ICAM3P32942 547 aa15.41■□□□□ 0.06
CTDSP1-212ENST00000494067 RBL2Q08999 1139 aa15.41■□□□□ 0.06
CTDSP1-212ENST00000494067 MBTPS1Q14703 1052 aa15.41■□□□□ 0.06
CTDSP1-212ENST00000494067 TSGA10IPQ3SY00 556 aa15.41■□□□□ 0.06
CTDSP1-212ENST00000494067 XRRA1Q6P2D8 792 aa15.41■□□□□ 0.06
CTDSP1-212ENST00000494067 SPRED2Q7Z698 418 aa15.41■□□□□ 0.06
CTDSP1-212ENST00000494067 NLRX1Q86UT6 975 aa15.41■□□□□ 0.06
CTDSP1-212ENST00000494067 TRIM50Q86XT4 487 aa15.41■□□□□ 0.06
CTDSP1-212ENST00000494067 COL25A1Q9BXS0 654 aaPredicted RBP15.41■□□□□ 0.06
CTDSP1-212ENST00000494067 TSPYL2Q9H2G4 693 aaPredicted RBP15.41■□□□□ 0.06
CTDSP1-212ENST00000494067 COL4A4P53420 1690 aaPredicted RBP15.41■□□□□ 0.06
CTDSP1-212ENST00000494067 ADAMTS3O15072 1205 aa15.4■□□□□ 0.06
CTDSP1-212ENST00000494067 ATP9AO75110 1047 aa15.4■□□□□ 0.06
CTDSP1-212ENST00000494067 LGALS2P05162 132 aa15.4■□□□□ 0.06
CTDSP1-212ENST00000494067 CKBP12277 381 aa15.4■□□□□ 0.06
CTDSP1-212ENST00000494067 CDC27P30260 824 aa15.4■□□□□ 0.06
CTDSP1-212ENST00000494067 HOXC8P31273 242 aa15.4■□□□□ 0.06
CTDSP1-212ENST00000494067 PCNX4Q63HM2 1172 aa15.4■□□□□ 0.06
CTDSP1-212ENST00000494067 WWC2Q6AWC2 1192 aa15.4■□□□□ 0.06
CTDSP1-212ENST00000494067 CYFIP1Q7L576 1253 aa15.4■□□□□ 0.06
CTDSP1-212ENST00000494067 TMCO2Q7Z6W1 182 aaPredicted RBP15.4■□□□□ 0.06
CTDSP1-212ENST00000494067 GIMAP8Q8ND71 665 aaPredicted RBP15.4■□□□□ 0.06
CTDSP1-212ENST00000494067 KCNB2Q92953 911 aa15.4■□□□□ 0.06
CTDSP1-212ENST00000494067 USP26Q9BXU7 913 aa15.4■□□□□ 0.06
CTDSP1-212ENST00000494067 PSTPIP2Q9H939 334 aa15.4■□□□□ 0.06
CTDSP1-212ENST00000494067 PRDM6Q9NQX0 595 aa15.4■□□□□ 0.06
CTDSP1-212ENST00000494067 C17orf102A2RUQ5 167 aa15.39■□□□□ 0.05
CTDSP1-212ENST00000494067 H3BRB1 525 aa15.39■□□□□ 0.05
CTDSP1-212ENST00000494067 EFCAB14O75071 495 aa15.39■□□□□ 0.05
CTDSP1-212ENST00000494067 GNAT1P11488 350 aa15.39■□□□□ 0.05
CTDSP1-212ENST00000494067 ITGB5P18084 799 aa15.39■□□□□ 0.05
CTDSP1-212ENST00000494067 CNKSR3Q6P9H4 555 aa15.39■□□□□ 0.05
CTDSP1-212ENST00000494067 CDHR1Q96JP9 859 aa15.39■□□□□ 0.05
CTDSP1-212ENST00000494067 PGBD1Q96JS3 809 aa15.39■□□□□ 0.05
CTDSP1-212ENST00000494067 GPR20Q99678 358 aa15.39■□□□□ 0.05
CTDSP1-212ENST00000494067 ZBED2Q9BTP6 218 aa15.39■□□□□ 0.05
CTDSP1-212ENST00000494067 TUT1Q9H6E5 874 aaKnown RBP15.39■□□□□ 0.05
CTDSP1-212ENST00000494067 EHMT1Q9H9B1 1298 aa15.39■□□□□ 0.05
CTDSP1-212ENST00000494067 ZNF215Q9UL58 517 aaPredicted RBP15.39■□□□□ 0.05
CTDSP1-212ENST00000494067 ABHD14A-ACY1A0A1B0GW23 586 aa15.38■□□□□ 0.05
CTDSP1-212ENST00000494067 EPOPA6NHQ4 379 aa15.38■□□□□ 0.05
CTDSP1-212ENST00000494067 SPDYE3A6NKU9 549 aa15.38■□□□□ 0.05
CTDSP1-212ENST00000494067 GTPBP6O43824 516 aaPredicted RBP15.38■□□□□ 0.05
CTDSP1-212ENST00000494067 TLL1O43897 1013 aa15.38■□□□□ 0.05
CTDSP1-212ENST00000494067 KCNA2P16389 499 aa15.38■□□□□ 0.05
CTDSP1-212ENST00000494067 IKBKEQ14164 716 aa15.38■□□□□ 0.05
CTDSP1-212ENST00000494067 ZNF618Q5T7W0 954 aa15.38■□□□□ 0.05
CTDSP1-212ENST00000494067 METTL7BQ6UX53 244 aa15.38■□□□□ 0.05
CTDSP1-212ENST00000494067 DHX32Q7L7V1 743 aaKnown RBP15.38■□□□□ 0.05
CTDSP1-212ENST00000494067 HEATR3Q7Z4Q2 680 aa15.38■□□□□ 0.05
CTDSP1-212ENST00000494067 HERC6Q8IVU3 1022 aa15.38■□□□□ 0.05
CTDSP1-212ENST00000494067 RBM28Q9NW13 759 aaKnown RBP15.38■□□□□ 0.05
CTDSP1-212ENST00000494067 SNX14Q9Y5W7 946 aa15.38■□□□□ 0.05
CTDSP1-212ENST00000494067 EMSYQ7Z589 1322 aa15.38■□□□□ 0.05
CTDSP1-212ENST00000494067 KLF18A0A0U1RQI7 1052 aa15.37■□□□□ 0.05
CTDSP1-212ENST00000494067 CXCL10P02778 98 aa15.37■□□□□ 0.05
CTDSP1-212ENST00000494067 CA3P07451 260 aa15.37■□□□□ 0.05
CTDSP1-212ENST00000494067 SMIM10L2AP0DMW4 78 aa15.37■□□□□ 0.05
CTDSP1-212ENST00000494067 SMIM10L2BP0DMW5 78 aa15.37■□□□□ 0.05
CTDSP1-212ENST00000494067 DEFB103AP81534 67 aa15.37■□□□□ 0.05
CTDSP1-212ENST00000494067 SP4Q02446 784 aa15.37■□□□□ 0.05
CTDSP1-212ENST00000494067 KRT32Q14532 448 aa15.37■□□□□ 0.05
CTDSP1-212ENST00000494067 CCDC85BQ15834 202 aaPredicted RBP15.37■□□□□ 0.05
CTDSP1-212ENST00000494067 IL27Q8NEV9 243 aa15.37■□□□□ 0.05
CTDSP1-212ENST00000494067 ATP6V0A1Q93050 837 aa15.37■□□□□ 0.05
CTDSP1-212ENST00000494067 SENP7Q9BQF6 1050 aa15.37■□□□□ 0.05
CTDSP1-212ENST00000494067 UBIAD1Q9Y5Z9 338 aa15.37■□□□□ 0.05
CTDSP1-212ENST00000494067 MICAL3Q7RTP6 2002 aa15.36■□□□□ 0.05
CTDSP1-212ENST00000494067 STXBP3O00186 592 aa15.36■□□□□ 0.05
CTDSP1-212ENST00000494067 RFXAPO00287 272 aa15.36■□□□□ 0.05
CTDSP1-212ENST00000494067 TREHO43280 583 aa15.36■□□□□ 0.05
CTDSP1-212ENST00000494067 ZBTB43O43298 467 aa15.36■□□□□ 0.05
CTDSP1-212ENST00000494067 HMGB1P09429 215 aaKnown RBP15.36■□□□□ 0.05
CTDSP1-212ENST00000494067 HSPA4P34932 840 aa15.36■□□□□ 0.05
CTDSP1-212ENST00000494067 THPOP40225 353 aa15.36■□□□□ 0.05
CTDSP1-212ENST00000494067 WDR5P61964 334 aaKnown RBP15.36■□□□□ 0.05
CTDSP1-212ENST00000494067 FGD1P98174 961 aa15.36■□□□□ 0.05
CTDSP1-212ENST00000494067 APOBRQ0VD83 1088 aa15.36■□□□□ 0.05
CTDSP1-212ENST00000494067 MKRN4PQ13434 485 aaPredicted RBP15.36■□□□□ 0.05
CTDSP1-212ENST00000494067 RTN1Q16799 776 aa15.36■□□□□ 0.05
CTDSP1-212ENST00000494067 TJAP1Q5JTD0 557 aa15.36■□□□□ 0.05
CTDSP1-212ENST00000494067 SERINC5Q86VE9 423 aa15.36■□□□□ 0.05
CTDSP1-212ENST00000494067 CYP2W1Q8TAV3 490 aa15.36■□□□□ 0.05
CTDSP1-212ENST00000494067 ATXN2LQ8WWM7 1075 aaKnown RBP15.36■□□□□ 0.05
CTDSP1-212ENST00000494067 CCDC136Q96JN2 1154 aa15.36■□□□□ 0.05
CTDSP1-212ENST00000494067 RNPEPQ9H4A4 650 aa15.36■□□□□ 0.05
CTDSP1-212ENST00000494067 TMEM260Q9NX78 707 aa15.36■□□□□ 0.05
CTDSP1-212ENST00000494067 PKD2L1Q9P0L9 805 aa15.36■□□□□ 0.05
CTDSP1-212ENST00000494067 PCDHA6Q9UN73 950 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms