RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 ITGB5P18084 799 aa11.21□□□□□ -0.61
UFD1-210ENST00000494054 HSPA4P34932 840 aa11.21□□□□□ -0.61
UFD1-210ENST00000494054 SP4Q02446 784 aa11.21□□□□□ -0.61
UFD1-210ENST00000494054 PTK7Q13308 1070 aa11.21□□□□□ -0.61
UFD1-210ENST00000494054 ADGRE1Q14246 886 aa11.21□□□□□ -0.61
UFD1-210ENST00000494054 KRT32Q14532 448 aa11.21□□□□□ -0.61
UFD1-210ENST00000494054 MBTPS1Q14703 1052 aa11.21□□□□□ -0.61
UFD1-210ENST00000494054 ZNF618Q5T7W0 954 aa11.21□□□□□ -0.61
UFD1-210ENST00000494054 NLRX1Q86UT6 975 aa11.21□□□□□ -0.61
UFD1-210ENST00000494054 TRIM50Q86XT4 487 aa11.21□□□□□ -0.61
UFD1-210ENST00000494054 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.21□□□□□ -0.61
UFD1-210ENST00000494054 USP38Q8NB14 1042 aa11.21□□□□□ -0.61
UFD1-210ENST00000494054 SENP7Q9BQF6 1050 aa11.21□□□□□ -0.61
UFD1-210ENST00000494054 RNPEPQ9H4A4 650 aa11.21□□□□□ -0.61
UFD1-210ENST00000494054 TUT1Q9H6E5 874 aaKnown RBP11.21□□□□□ -0.61
UFD1-210ENST00000494054 RBM28Q9NW13 759 aaKnown RBP11.21□□□□□ -0.61
UFD1-210ENST00000494054 PCDHA6Q9UN73 950 aa11.21□□□□□ -0.61
UFD1-210ENST00000494054 PCDHA8Q9Y5H6 950 aa11.21□□□□□ -0.61
UFD1-210ENST00000494054 PCDHA11Q9Y5I1 949 aa11.21□□□□□ -0.61
UFD1-210ENST00000494054 SNX14Q9Y5W7 946 aa11.21□□□□□ -0.61
UFD1-210ENST00000494054 UBIAD1Q9Y5Z9 338 aa11.21□□□□□ -0.61
UFD1-210ENST00000494054 GBF1Q92538 1859 aa11.21□□□□□ -0.62
UFD1-210ENST00000494054 TANC1Q9C0D5 1861 aa11.21□□□□□ -0.62
UFD1-210ENST00000494054 DOCK5Q9H7D0 1870 aa11.21□□□□□ -0.62
UFD1-210ENST00000494054 SPDYE3A6NKU9 549 aa11.2□□□□□ -0.62
UFD1-210ENST00000494054 GOLGA8AA7E2F4 631 aa11.2□□□□□ -0.62
UFD1-210ENST00000494054 GOLGA8BA8MQT2 603 aa11.2□□□□□ -0.62
UFD1-210ENST00000494054 NOP56O00567 594 aaKnown RBP11.2□□□□□ -0.62
UFD1-210ENST00000494054 TREHO43280 583 aa11.2□□□□□ -0.62
UFD1-210ENST00000494054 CXCL10P02778 98 aa11.2□□□□□ -0.62
UFD1-210ENST00000494054 SMIM10L2AP0DMW4 78 aa11.2□□□□□ -0.62
UFD1-210ENST00000494054 SMIM10L2BP0DMW5 78 aa11.2□□□□□ -0.62
UFD1-210ENST00000494054 KCNA2P16389 499 aa11.2□□□□□ -0.62
UFD1-210ENST00000494054 HOXC8P31273 242 aa11.2□□□□□ -0.62
UFD1-210ENST00000494054 ADD1P35611 737 aaKnown RBP11.2□□□□□ -0.62
UFD1-210ENST00000494054 APOBRQ0VD83 1088 aa11.2□□□□□ -0.62
UFD1-210ENST00000494054 UTP14CQ5TAP6 766 aaKnown RBP11.2□□□□□ -0.62
UFD1-210ENST00000494054 GPRASP2Q96D09 838 aa11.2□□□□□ -0.62
UFD1-210ENST00000494054 PGBD1Q96JS3 809 aa11.2□□□□□ -0.62
UFD1-210ENST00000494054 JAKMIP1Q96N16 626 aaKnown RBP11.2□□□□□ -0.62
UFD1-210ENST00000494054 USP26Q9BXU7 913 aa11.2□□□□□ -0.62
UFD1-210ENST00000494054 SLC28A3Q9HAS3 691 aa11.2□□□□□ -0.62
UFD1-210ENST00000494054 PKD2L1Q9P0L9 805 aa11.2□□□□□ -0.62
UFD1-210ENST00000494054 GSTTP1A0A1W2PQM5 241 aa11.19□□□□□ -0.62
UFD1-210ENST00000494054 C17orf102A2RUQ5 167 aa11.19□□□□□ -0.62
UFD1-210ENST00000494054 STXBP3O00186 592 aa11.19□□□□□ -0.62
UFD1-210ENST00000494054 ARHGEF15O94989 841 aa11.19□□□□□ -0.62
UFD1-210ENST00000494054 HMGB1P09429 215 aaKnown RBP11.19□□□□□ -0.62
UFD1-210ENST00000494054 NAPAP54920 295 aa11.19□□□□□ -0.62
UFD1-210ENST00000494054 Q6ZUG5 572 aa11.19□□□□□ -0.62
UFD1-210ENST00000494054 TMCO2Q7Z6W1 182 aaPredicted RBP11.19□□□□□ -0.62
UFD1-210ENST00000494054 SERINC5Q86VE9 423 aa11.19□□□□□ -0.62
UFD1-210ENST00000494054 HERC6Q8IVU3 1022 aa11.19□□□□□ -0.62
UFD1-210ENST00000494054 CYP2W1Q8TAV3 490 aa11.19□□□□□ -0.62
UFD1-210ENST00000494054 PHOSPHO2Q8TCD6 241 aa11.19□□□□□ -0.62
UFD1-210ENST00000494054 ATP6V0A1Q93050 837 aa11.19□□□□□ -0.62
UFD1-210ENST00000494054 SLC9A7Q96T83 725 aa11.19□□□□□ -0.62
UFD1-210ENST00000494054 OSBPL7Q9BZF2 842 aa11.19□□□□□ -0.62
UFD1-210ENST00000494054 RIC8AQ9NPQ8 531 aa11.19□□□□□ -0.62
UFD1-210ENST00000494054 JADE2Q9NQC1 790 aa11.19□□□□□ -0.62
UFD1-210ENST00000494054 SETD4Q9NVD3 440 aa11.19□□□□□ -0.62
UFD1-210ENST00000494054 NAP1L2Q9ULW6 460 aaPredicted RBP11.19□□□□□ -0.62
UFD1-210ENST00000494054 CUL9Q8IWT3 2517 aa11.18□□□□□ -0.62
UFD1-210ENST00000494054 SMCO2A6NFE2 343 aa11.18□□□□□ -0.62
UFD1-210ENST00000494054 ADAMTS3O15072 1205 aa11.18□□□□□ -0.62
UFD1-210ENST00000494054 BAIAP3O94812 1187 aa11.18□□□□□ -0.62
UFD1-210ENST00000494054 CA3P07451 260 aa11.18□□□□□ -0.62
UFD1-210ENST00000494054 RPS6KB1P23443 525 aa11.18□□□□□ -0.62
UFD1-210ENST00000494054 TCF7P36402 384 aaPredicted RBP11.18□□□□□ -0.62
UFD1-210ENST00000494054 THPOP40225 353 aa11.18□□□□□ -0.62
UFD1-210ENST00000494054 RCAN1P53805 252 aa11.18□□□□□ -0.62
UFD1-210ENST00000494054 WDR5P61964 334 aaKnown RBP11.18□□□□□ -0.62
UFD1-210ENST00000494054 DEFB103AP81534 67 aa11.18□□□□□ -0.62
UFD1-210ENST00000494054 FGD1P98174 961 aa11.18□□□□□ -0.62
UFD1-210ENST00000494054 PPP2R2DQ66LE6 453 aa11.18□□□□□ -0.62
UFD1-210ENST00000494054 CNKSR3Q6P9H4 555 aa11.18□□□□□ -0.62
UFD1-210ENST00000494054 SPRED2Q7Z698 418 aa11.18□□□□□ -0.62
UFD1-210ENST00000494054 GIMAP8Q8ND71 665 aaPredicted RBP11.18□□□□□ -0.62
UFD1-210ENST00000494054 BRF1Q92994 677 aa11.18□□□□□ -0.62
UFD1-210ENST00000494054 GAS2L1Q99501 681 aaPredicted RBP11.18□□□□□ -0.62
UFD1-210ENST00000494054 CERS4Q9HA82 394 aa11.18□□□□□ -0.62
UFD1-210ENST00000494054 PRDM6Q9NQX0 595 aa11.18□□□□□ -0.62
UFD1-210ENST00000494054 TMEM260Q9NX78 707 aa11.18□□□□□ -0.62
UFD1-210ENST00000494054 BARHL2Q9NY43 387 aa11.18□□□□□ -0.62
UFD1-210ENST00000494054 MYO9BQ13459 2157 aa11.18□□□□□ -0.62
UFD1-210ENST00000494054 RSPH10B2B2RC85 870 aa11.17□□□□□ -0.62
UFD1-210ENST00000494054 RFXAPO00287 272 aa11.17□□□□□ -0.62
UFD1-210ENST00000494054 PARNO95453 639 aaKnown RBP11.17□□□□□ -0.62
UFD1-210ENST00000494054 RSPH10BP0C881 870 aa11.17□□□□□ -0.62
UFD1-210ENST00000494054 ARP10275 920 aa11.17□□□□□ -0.62
UFD1-210ENST00000494054 IGFBP4P22692 258 aa11.17□□□□□ -0.62
UFD1-210ENST00000494054 CLK2P49760 499 aaKnown RBP11.17□□□□□ -0.62
UFD1-210ENST00000494054 METAP2P50579 478 aaKnown RBP eCLIP11.17□□□□□ -0.62
UFD1-210ENST00000494054 ADCY7P51828 1080 aa11.17□□□□□ -0.62
UFD1-210ENST00000494054 ADAM17P78536 824 aa11.17□□□□□ -0.62
UFD1-210ENST00000494054 MTMR1Q13613 665 aa11.17□□□□□ -0.62
UFD1-210ENST00000494054 PPP1R18Q6NYC8 613 aa11.17□□□□□ -0.62
UFD1-210ENST00000494054 BLOC1S2Q6QNY1 142 aa11.17□□□□□ -0.62
UFD1-210ENST00000494054 LMBR1Q8WVP7 490 aa11.17□□□□□ -0.62
UFD1-210ENST00000494054 PPM1EQ8WY54 764 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms