RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, human

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-222	ENST00000494012	FAM86B2	P0C5J1	330 aa		11.35	□□□□□ -0.59
MACF1-222	ENST00000494012	GCFC2	P16383	781 aa	Known RBP	11.35	□□□□□ -0.59
MACF1-222	ENST00000494012	KCNA2	P16389	499 aa		11.35	□□□□□ -0.59
MACF1-222	ENST00000494012	FOSB	P53539	338 aa		11.35	□□□□□ -0.59
MACF1-222	ENST00000494012	ATN1	P54259	1190 aa	Predicted RBP	11.35	□□□□□ -0.59
MACF1-222	ENST00000494012	GNL2	Q13823	731 aa	Known RBP	11.35	□□□□□ -0.59
MACF1-222	ENST00000494012	SNX17	Q15036	470 aa		11.35	□□□□□ -0.59
MACF1-222	ENST00000494012	PRR16	Q569H4	304 aa		11.35	□□□□□ -0.59
MACF1-222	ENST00000494012	MOXD1	Q6UVY6	613 aa		11.35	□□□□□ -0.59
MACF1-222	ENST00000494012	PIK3AP1	Q6ZUJ8	805 aa		11.35	□□□□□ -0.59
MACF1-222	ENST00000494012	CYFIP1	Q7L576	1253 aa		11.35	□□□□□ -0.59
MACF1-222	ENST00000494012	NEK8	Q86SG6	692 aa		11.35	□□□□□ -0.59
MACF1-222	ENST00000494012	PLA2G4D	Q86XP0	818 aa		11.35	□□□□□ -0.59
MACF1-222	ENST00000494012	HSCB	Q8IWL3	235 aa		11.35	□□□□□ -0.59
MACF1-222	ENST00000494012	FBXO18	Q8NFZ0	1043 aa		11.35	□□□□□ -0.59
MACF1-222	ENST00000494012	CYP2W1	Q8TAV3	490 aa		11.35	□□□□□ -0.59
MACF1-222	ENST00000494012	SNX21	Q969T3	373 aa		11.35	□□□□□ -0.59
MACF1-222	ENST00000494012	KATNAL1	Q9BW62	490 aa		11.35	□□□□□ -0.59
MACF1-222	ENST00000494012	AGO4	Q9HCK5	861 aa	Known RBP	11.35	□□□□□ -0.59
MACF1-222	ENST00000494012	JPH1	Q9HDC5	661 aa	Predicted RBP	11.35	□□□□□ -0.59
MACF1-222	ENST00000494012	TCEAL9	Q9UHQ7	104 aa		11.35	□□□□□ -0.59
MACF1-222	ENST00000494012	NR2E3	Q9Y5X4	410 aa		11.35	□□□□□ -0.59
MACF1-222	ENST00000494012	IPO5	O00410	1097 aa	Known RBP	11.34	□□□□□ -0.59
MACF1-222	ENST00000494012	HOXD8	P13378	290 aa	Predicted RBP	11.34	□□□□□ -0.59
MACF1-222	ENST00000494012	GJB2	P29033	226 aa		11.34	□□□□□ -0.59
MACF1-222	ENST00000494012	CUL4A	Q13619	759 aa		11.34	□□□□□ -0.59
MACF1-222	ENST00000494012	INF2	Q27J81	1249 aa		11.34	□□□□□ -0.59
MACF1-222	ENST00000494012	LRRC26	Q2I0M4	334 aa		11.34	□□□□□ -0.59
MACF1-222	ENST00000494012	HSDL1	Q3SXM5	330 aa		11.34	□□□□□ -0.59
MACF1-222	ENST00000494012	OXER1	Q8TDS5	423 aa		11.34	□□□□□ -0.59
MACF1-222	ENST00000494012	ZNF577	Q9BSK1	485 aa		11.34	□□□□□ -0.59
MACF1-222	ENST00000494012	FOXP1	Q9H334	677 aa	Predicted RBP	11.34	□□□□□ -0.59
MACF1-222	ENST00000494012	TBC1D22B	Q9NU19	505 aa		11.34	□□□□□ -0.59
MACF1-222	ENST00000494012	PKD2L1	Q9P0L9	805 aa		11.34	□□□□□ -0.59
MACF1-222	ENST00000494012	CYP3A7-CYP3A51P	A0A087WV96	503 aa		11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	BTBD18	B2RXH4	712 aa		11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	SORBS3	O60504	671 aa		11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	ATP9A	O75110	1047 aa		11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	F2	P00734	622 aa		11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	AR	P10275	920 aa		11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	PDC	P20941	246 aa		11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	CYP3A7	P24462	503 aa		11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	RTP1	P59025	263 aa		11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	GUCY1B3	Q02153	619 aa		11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	SP4	Q02446	784 aa		11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	NR5A1	Q13285	461 aa		11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	ITGA7	Q13683	1181 aa		11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	LETM2	Q2VYF4	491 aa		11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	TRIM60	Q495X7	471 aa		11.33	□□□□□ -0.6
MACF1-222	ENST00000494012		Q4G0T1	1027 aa		11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	PPP4R3A	Q6IN85	833 aa		11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	ANKRD33	Q7Z3H0	272 aa		11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	TNFRSF25	Q93038	417 aa		11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	INTS4	Q96HW7	963 aa	Known RBP	11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	TOX2	Q96NM4	488 aa		11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	GPR20	Q99678	358 aa		11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	SLC9A2	Q9UBY0	812 aa		11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	DDX25	Q9UHL0	483 aa	Known RBP	11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	ZNF215	Q9UL58	517 aa	Predicted RBP	11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	ATP11B	Q9Y2G3	1177 aa		11.33	□□□□□ -0.6
MACF1-222	ENST00000494012	MKI67	P46013	3256 aa	Known RBP	11.32	□□□□□ -0.6
MACF1-222	ENST00000494012	DCDC2C	A8MYV0	355 aa		11.32	□□□□□ -0.6
MACF1-222	ENST00000494012		H3BQV1	296 aa		11.32	□□□□□ -0.6
MACF1-222	ENST00000494012	ARVCF	O00192	962 aa		11.32	□□□□□ -0.6
MACF1-222	ENST00000494012	TLR3	O15455	904 aa	Known RBP	11.32	□□□□□ -0.6
MACF1-222	ENST00000494012	CCNT1	O60563	726 aa	Known RBP	11.32	□□□□□ -0.6
MACF1-222	ENST00000494012	PQBP1	O60828	265 aa	Known RBP	11.32	□□□□□ -0.6
MACF1-222	ENST00000494012	TDP2	O95551	362 aa		11.32	□□□□□ -0.6
MACF1-222	ENST00000494012	LGALS2	P05162	132 aa		11.32	□□□□□ -0.6
MACF1-222	ENST00000494012	ZNF286B	P0CG31	522 aa		11.32	□□□□□ -0.6
MACF1-222	ENST00000494012	TCF7	P36402	384 aa	Predicted RBP	11.32	□□□□□ -0.6
MACF1-222	ENST00000494012	PSMC6	P62333	389 aa		11.32	□□□□□ -0.6
MACF1-222	ENST00000494012	KRT76	Q01546	638 aa		11.32	□□□□□ -0.6
MACF1-222	ENST00000494012	PTPN11	Q06124	597 aa	Predicted RBP	11.32	□□□□□ -0.6
MACF1-222	ENST00000494012	ITGB3BP	Q13352	177 aa	Predicted RBP	11.32	□□□□□ -0.6
MACF1-222	ENST00000494012	NFRKB	Q6P4R8	1299 aa		11.32	□□□□□ -0.6
MACF1-222	ENST00000494012	C7orf61	Q8IZ16	206 aa		11.32	□□□□□ -0.6
MACF1-222	ENST00000494012	LENG9	Q96B70	501 aa		11.32	□□□□□ -0.6
MACF1-222	ENST00000494012	MBOAT7	Q96N66	472 aa		11.32	□□□□□ -0.6
MACF1-222	ENST00000494012	RIT2	Q99578	217 aa		11.32	□□□□□ -0.6
MACF1-222	ENST00000494012	PRKAG2	Q9UGJ0	569 aa		11.32	□□□□□ -0.6
MACF1-222	ENST00000494012	CEP290	O15078	2479 aa		11.32	□□□□□ -0.6
MACF1-222	ENST00000494012	WDR81	Q562E7	1941 aa		11.31	□□□□□ -0.6
MACF1-222	ENST00000494012	LTBP2	Q14767	1821 aa		11.31	□□□□□ -0.6
MACF1-222	ENST00000494012	MYH9	P35579	1960 aa	Known RBP	11.31	□□□□□ -0.6
MACF1-222	ENST00000494012		H3BRB1	525 aa		11.31	□□□□□ -0.6
MACF1-222	ENST00000494012	MSH4	O15457	936 aa		11.31	□□□□□ -0.6
MACF1-222	ENST00000494012	GAS7	O60861	476 aa		11.31	□□□□□ -0.6
MACF1-222	ENST00000494012	HSP90AA1	P07900	732 aa	Known RBP	11.31	□□□□□ -0.6
MACF1-222	ENST00000494012	CDK7	P50613	346 aa		11.31	□□□□□ -0.6
MACF1-222	ENST00000494012	TLE2	Q04725	743 aa		11.31	□□□□□ -0.6
MACF1-222	ENST00000494012	MFSD10	Q14728	455 aa		11.31	□□□□□ -0.6
MACF1-222	ENST00000494012	ZNF746	Q6NUN9	644 aa	Predicted RBP	11.31	□□□□□ -0.6
MACF1-222	ENST00000494012	NOSTRIN	Q8IVI9	506 aa		11.31	□□□□□ -0.6
MACF1-222	ENST00000494012	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.31	□□□□□ -0.6
MACF1-222	ENST00000494012	C7orf31	Q8N865	590 aa		11.31	□□□□□ -0.6
MACF1-222	ENST00000494012	SLC43A3	Q8NBI5	491 aa		11.31	□□□□□ -0.6
MACF1-222	ENST00000494012	SEPT1	Q8WYJ6	367 aa		11.31	□□□□□ -0.6
MACF1-222	ENST00000494012	C16orf70	Q9BSU1	422 aa		11.31	□□□□□ -0.6
MACF1-222	ENST00000494012	TUT1	Q9H6E5	874 aa	Known RBP	11.31	□□□□□ -0.6

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