RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 IKZF1Q13422 519 aa8.14□□□□□ -1.11
SMC2-205ENST00000493955 MROH9Q5TGP6 573 aa8.14□□□□□ -1.11
SMC2-205ENST00000493955 CCSAPQ6IQ19 270 aaPredicted RBP8.14□□□□□ -1.11
SMC2-205ENST00000493955 PTRH1Q86Y79 214 aaKnown RBP8.14□□□□□ -1.11
SMC2-205ENST00000493955 RIOX2Q8IUF8 465 aa8.14□□□□□ -1.11
SMC2-205ENST00000493955 KIAA1958Q8N8K9 716 aa8.14□□□□□ -1.11
SMC2-205ENST00000493955 NLGN2Q8NFZ4 835 aa8.14□□□□□ -1.11
SMC2-205ENST00000493955 PLEKHO2Q8TD55 490 aa8.14□□□□□ -1.11
SMC2-205ENST00000493955 LINC01599Q8WXQ3 324 aa8.14□□□□□ -1.11
SMC2-205ENST00000493955 SLC13A1Q9BZW2 595 aa8.14□□□□□ -1.11
SMC2-205ENST00000493955 PCIF1Q9H4Z3 704 aa8.14□□□□□ -1.11
SMC2-205ENST00000493955 LUC7LQ9NQ29 371 aaKnown RBP8.14□□□□□ -1.11
SMC2-205ENST00000493955 C14orf119Q9NWQ9 140 aa8.14□□□□□ -1.11
SMC2-205ENST00000493955 RWDD3Q9Y3V2 267 aa8.14□□□□□ -1.11
SMC2-205ENST00000493955 TCRBV5S4A2TA0A5A2 114 aa8.13□□□□□ -1.11
SMC2-205ENST00000493955 NKRFO15226 690 aaKnown RBP eCLIP8.13□□□□□ -1.11
SMC2-205ENST00000493955 PPP1R11O60927 126 aaPredicted RBP8.13□□□□□ -1.11
SMC2-205ENST00000493955 HIP1RO75146 1068 aa8.13□□□□□ -1.11
SMC2-205ENST00000493955 MT-CO1P00395 513 aa8.13□□□□□ -1.11
SMC2-205ENST00000493955 FUCA1P04066 466 aa8.13□□□□□ -1.11
SMC2-205ENST00000493955 GRIK1P39086 918 aa8.13□□□□□ -1.11
SMC2-205ENST00000493955 PHC1P78364 1004 aa8.13□□□□□ -1.11
SMC2-205ENST00000493955 FIGNQ5HY92 759 aa8.13□□□□□ -1.11
SMC2-205ENST00000493955 FAM102BQ5T8I3 360 aa8.13□□□□□ -1.11
SMC2-205ENST00000493955 NXNQ6DKJ4 435 aa8.13□□□□□ -1.11
SMC2-205ENST00000493955 EP400NLQ6ZTU2 488 aa8.13□□□□□ -1.11
SMC2-205ENST00000493955 NOSTRINQ8IVI9 506 aa8.13□□□□□ -1.11
SMC2-205ENST00000493955 FUBP3Q96I24 572 aaKnown RBP eCLIP8.13□□□□□ -1.116e-6■■■■□ 23.4
SMC2-205ENST00000493955 POLR3GLQ9BT43 218 aa8.13□□□□□ -1.11
SMC2-205ENST00000493955 MTA3Q9BTC8 594 aa8.13□□□□□ -1.11
SMC2-205ENST00000493955 RHOBTB2Q9BYZ6 727 aa8.13□□□□□ -1.11
SMC2-205ENST00000493955 CARS2Q9HA77 564 aaKnown RBP8.13□□□□□ -1.11
SMC2-205ENST00000493955 SRPK3Q9UPE1 567 aa8.13□□□□□ -1.11
SMC2-205ENST00000493955 LUC7L2Q9Y383 392 aaKnown RBP8.13□□□□□ -1.11
SMC2-205ENST00000493955 MAN2B1O00754 1011 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 KCNK3O14649 394 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 USP2O75604 605 aaPredicted RBP8.12□□□□□ -1.11
SMC2-205ENST00000493955 RFPL1O75677 317 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 ZSCAN20P17040 1043 aaPredicted RBP8.12□□□□□ -1.11
SMC2-205ENST00000493955 SLC9A1P19634 815 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 GNALP38405 381 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 RTP1P59025 263 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 TERF2Q15554 542 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 FSTL4Q6MZW2 842 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 TCEAL8Q8IYN2 117 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 LZTR1Q8N653 840 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 PIP4K2CQ8TBX8 421 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 USP33Q8TEY7 942 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 ELF4Q99607 663 aaPredicted RBP8.12□□□□□ -1.11
SMC2-205ENST00000493955 SLC6A20Q9NP91 592 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 LMCD1Q9NZU5 365 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 EBF1Q9UH73 591 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 DSEQ9UL01 958 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 KRIT1O00522 736 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 ZGLP1P0C6A0 271 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 CCND1P24385 295 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 HOXA10P31260 410 aaPredicted RBP8.12□□□□□ -1.11
SMC2-205ENST00000493955 LSP1P33241 339 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 KIF11P52732 1056 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 GPR158Q5T848 1215 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 CEP128Q6ZU80 1094 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 C14orf80Q86SX3 495 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 UHMK1Q8TAS1 419 aaKnown RBP8.12□□□□□ -1.11
SMC2-205ENST00000493955 SH3RF2Q8TEC5 729 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.12□□□□□ -1.11
SMC2-205ENST00000493955 JPH3Q8WXH2 748 aaPredicted RBP8.12□□□□□ -1.11
SMC2-205ENST00000493955 TOMM22Q9NS69 142 aa8.12□□□□□ -1.11
SMC2-205ENST00000493955 A0A1W2PQ27 194 aa8.11□□□□□ -1.11
SMC2-205ENST00000493955 A0A1W2PQ64 194 aa8.11□□□□□ -1.11
SMC2-205ENST00000493955 A0A1W2PQC6 194 aa8.11□□□□□ -1.11
SMC2-205ENST00000493955 A0A1W2PQD8 194 aa8.11□□□□□ -1.11
SMC2-205ENST00000493955 FZD9O00144 591 aa8.11□□□□□ -1.11
SMC2-205ENST00000493955 DVL2O14641 736 aa8.11□□□□□ -1.11
SMC2-205ENST00000493955 SNUPNO95149 360 aaKnown RBP8.11□□□□□ -1.11
SMC2-205ENST00000493955 CFBP00751 764 aa8.11□□□□□ -1.11
SMC2-205ENST00000493955 SMAD3P84022 425 aaKnown RBP8.11□□□□□ -1.11
SMC2-205ENST00000493955 SMAD2Q15796 467 aaKnown RBP8.11□□□□□ -1.11
SMC2-205ENST00000493955 MSMPQ1L6U9 139 aa8.11□□□□□ -1.11
SMC2-205ENST00000493955 HSF5Q4G112 596 aaPredicted RBP8.11□□□□□ -1.11
SMC2-205ENST00000493955 NKAPLQ5M9Q1 402 aa8.11□□□□□ -1.11
SMC2-205ENST00000493955 ANGEL2Q5VTE6 544 aaKnown RBP8.11□□□□□ -1.11
SMC2-205ENST00000493955 RASSF3Q86WH2 238 aa8.11□□□□□ -1.11
SMC2-205ENST00000493955 NLGN4XQ8N0W4 816 aa8.11□□□□□ -1.11
SMC2-205ENST00000493955 STK11IPQ8N1F8 1099 aa8.11□□□□□ -1.11
SMC2-205ENST00000493955 ANKS4BQ8N8V4 417 aa8.11□□□□□ -1.11
SMC2-205ENST00000493955 C1orf162Q8NEQ5 155 aaPredicted RBP8.11□□□□□ -1.11
SMC2-205ENST00000493955 TTC8Q8TAM2 541 aa8.11□□□□□ -1.11
SMC2-205ENST00000493955 ASIC4Q96FT7 647 aa8.11□□□□□ -1.11
SMC2-205ENST00000493955 ALPK1Q96QP1 1244 aa8.11□□□□□ -1.11
SMC2-205ENST00000493955 KRTAP4-12Q9BQ66 201 aa8.11□□□□□ -1.11
SMC2-205ENST00000493955 SLAMF8Q9P0V8 285 aa8.11□□□□□ -1.11
SMC2-205ENST00000493955 IMPACTQ9P2X3 320 aa8.11□□□□□ -1.11
SMC2-205ENST00000493955 IP6K2Q9UHH9 426 aa8.11□□□□□ -1.11
SMC2-205ENST00000493955 NOB1Q9ULX3 412 aaKnown RBP8.11□□□□□ -1.11
SMC2-205ENST00000493955 B3GALT1Q9Y5Z6 326 aa8.11□□□□□ -1.11
SMC2-205ENST00000493955 TAF6LQ9Y6J9 622 aa8.11□□□□□ -1.11
SMC2-205ENST00000493955 SCO2A0A1W2PP80 73 aa8.1□□□□□ -1.11
SMC2-205ENST00000493955 GOLGA6CA6NDK9 693 aa8.1□□□□□ -1.11
SMC2-205ENST00000493955 GOLGA6BA6NDN3 693 aa8.1□□□□□ -1.11
SMC2-205ENST00000493955 CLASP2O75122 1294 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms