RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 ATG3Q9NT62 314 aa5.62□□□□□ -1.51
GTF3A-208ENST00000493903 NPHP3-ACAD11A0A0J9YXS1 232 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 PCDHGA12O60330 932 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 ABCC9O60706 1549 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 ZNF205O95201 554 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 POU5F1BQ06416 359 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 NFIAQ12857 509 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 ZNF174Q15697 407 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 TMEM95Q3KNT9 176 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 INO80DQ53TQ3 878 aaPredicted RBP5.61□□□□□ -1.51
GTF3A-208ENST00000493903 TOGARAM2Q6ZUX3 1019 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 SLC35G2Q8TBE7 412 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 LMBR1Q8WVP7 490 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 GJA10Q969M2 543 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 TCTN2Q96GX1 697 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 DUSP23Q9BVJ7 150 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 CATSPERZQ9NTU4 200 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 H2AFY2Q9P0M6 372 aaPredicted RBP5.61□□□□□ -1.51
GTF3A-208ENST00000493903 GTF2IRD1Q9UHL9 959 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 ADGRE2Q9UHX3 823 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 MINPP1Q9UNW1 487 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 INVSQ9Y283 1065 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 PTPN22Q9Y2R2 807 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 NOC2LQ9Y3T9 749 aaKnown RBP5.61□□□□□ -1.51
GTF3A-208ENST00000493903 PCDHGA9Q9Y5G4 932 aaKnown RBP5.61□□□□□ -1.51
GTF3A-208ENST00000493903 PCDHGA8Q9Y5G5 932 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 PCDHGA7Q9Y5G6 932 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 PCDHGA6Q9Y5G7 932 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 PCDHGA3Q9Y5H0 932 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 PCDHGA2Q9Y5H1 932 aa5.61□□□□□ -1.51
GTF3A-208ENST00000493903 CNTNAP4Q9C0A0 1308 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 FAM95CA0A1B0GW59 222 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 SLC12A8A0AV02 714 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 SHISA3A0PJX4 238 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 GOLGA8AA7E2F4 631 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 GOLGA8BA8MQT2 603 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 ZNF561-AS1K7EIQ3 104 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 IGF2BP3O00425 579 aaKnown RBP eCLIP5.6□□□□□ -1.51
GTF3A-208ENST00000493903 APAF1O14727 1248 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 XPOTO43592 962 aaKnown RBP5.6□□□□□ -1.51
GTF3A-208ENST00000493903 NRDCO43847 1150 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 IGLV1-40P01703 118 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 ZNF865P0CJ78 1059 aaPredicted RBP5.6□□□□□ -1.51
GTF3A-208ENST00000493903 SRFP11831 508 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 GPR3P46089 330 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 SCAND1P57086 179 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 SMAD3P84022 425 aaKnown RBP5.6□□□□□ -1.51
GTF3A-208ENST00000493903 LSAMPQ13449 338 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 KRT72Q14CN4 511 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 SMAD2Q15796 467 aaKnown RBP5.6□□□□□ -1.51
GTF3A-208ENST00000493903 RNF43Q68DV7 783 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 B3GNT9Q6UX72 402 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 SRGAP1Q7Z6B7 1085 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 CISD2Q8N5K1 135 aaKnown RBP5.6□□□□□ -1.51
GTF3A-208ENST00000493903 LRGUKQ96M69 825 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 ACAP3Q96P50 834 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 ORAI2Q96SN7 254 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 NAP1L4Q99733 375 aaKnown RBP5.6□□□□□ -1.51
GTF3A-208ENST00000493903 ZDHHC5Q9C0B5 715 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 C1GALT1Q9NS00 363 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 TOPORSQ9NS56 1045 aaPredicted RBP5.6□□□□□ -1.51
GTF3A-208ENST00000493903 SAP30BPQ9UHR5 308 aaKnown RBP5.6□□□□□ -1.51
GTF3A-208ENST00000493903 PUF60Q9UHX1 559 aaKnown RBP5.6□□□□□ -1.51
GTF3A-208ENST00000493903 CBLCQ9ULV8 474 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 DAAM1Q9Y4D1 1078 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 PCDHA2Q9Y5H9 948 aa5.6□□□□□ -1.51
GTF3A-208ENST00000493903 RASSF10A6NK89 507 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 DYNC1LI2O43237 492 aaPredicted RBP5.59□□□□□ -1.51
GTF3A-208ENST00000493903 CTNND1O60716 968 aaKnown RBP5.59□□□□□ -1.51
GTF3A-208ENST00000493903 OFD1O75665 1012 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 WDHD1O75717 1129 aaPredicted RBP5.59□□□□□ -1.51
GTF3A-208ENST00000493903 TCEA3O75764 348 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 ZRANB2O95218 330 aaKnown RBP eCLIP5.59□□□□□ -1.51
GTF3A-208ENST00000493903 CBX7O95931 251 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 HRGP04196 525 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 ZBTB48P10074 688 aaPredicted RBP5.59□□□□□ -1.51
GTF3A-208ENST00000493903 HTRA3P83110 453 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 CDK5R2Q13319 367 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 GALEQ14376 348 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 NFKBIBQ15653 356 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 GPR19Q15760 415 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 ZMYM1Q5SVZ6 1142 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 FAM83BQ5T0W9 1011 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 ZFYVE27Q5T4F4 411 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 IFIT1BQ5T764 474 aaKnown RBP5.59□□□□□ -1.51
GTF3A-208ENST00000493903 HHIPL2Q6UWX4 724 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 FRMD7Q6ZUT3 714 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 FAM214BQ7L5A3 538 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 CATIPQ7Z7H3 387 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 ZZZ3Q8IYH5 903 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 LINC00116Q8NCU8 138 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 TEKT5Q96M29 485 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 MFSD14AQ96MC6 490 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 RNF38Q9H0F5 515 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 CSRNP2Q9H175 543 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 SLC12A5Q9H2X9 1139 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 CDIP1Q9H305 208 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 TRIT1Q9H3H1 467 aaKnown RBP5.59□□□□□ -1.51
GTF3A-208ENST00000493903 KLHL11Q9NVR0 708 aa5.59□□□□□ -1.51
GTF3A-208ENST00000493903 DDX20Q9UHI6 824 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms