RNA–Protein interactions for RNA: ENST00000493511.1

GTF3C2-212, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-212ENST00000493511 PTGISQ16647 500 aa20.57■□□□□ 0.88
GTF3C2-212ENST00000493511 CEP55Q53EZ4 464 aa20.57■□□□□ 0.88
GTF3C2-212ENST00000493511 C9orf50Q5SZB4 431 aa20.57■□□□□ 0.88
GTF3C2-212ENST00000493511 JAKMIP3Q5VZ66 844 aa20.57■□□□□ 0.88
GTF3C2-212ENST00000493511 PGBD1Q96JS3 809 aa20.57■□□□□ 0.88
GTF3C2-212ENST00000493511 GPR20Q99678 358 aa20.57■□□□□ 0.88
GTF3C2-212ENST00000493511 MXRA8Q9BRK3 442 aa20.57■□□□□ 0.88
GTF3C2-212ENST00000493511 ALG1Q9BT22 464 aa20.57■□□□□ 0.88
GTF3C2-212ENST00000493511 BCAS3Q9H6U6 928 aa20.57■□□□□ 0.88
GTF3C2-212ENST00000493511 TMEM260Q9NX78 707 aa20.57■□□□□ 0.88
GTF3C2-212ENST00000493511 HAS3O00219 553 aa20.56■□□□□ 0.88
GTF3C2-212ENST00000493511 SOX1O00570 391 aaPredicted RBP20.56■□□□□ 0.88
GTF3C2-212ENST00000493511 LGALS2P05162 132 aa20.56■□□□□ 0.88
GTF3C2-212ENST00000493511 KCNA2P16389 499 aa20.56■□□□□ 0.88
GTF3C2-212ENST00000493511 EPHB4P54760 987 aa20.56■□□□□ 0.88
GTF3C2-212ENST00000493511 AK2P54819 239 aa20.56■□□□□ 0.88
GTF3C2-212ENST00000493511 ARHGAP4P98171 946 aa20.56■□□□□ 0.88
GTF3C2-212ENST00000493511 GPR153Q6NV75 609 aa20.56■□□□□ 0.88
GTF3C2-212ENST00000493511 FAM177A1Q8N128 213 aaPredicted RBP20.56■□□□□ 0.88
GTF3C2-212ENST00000493511 PPP1R13LQ8WUF5 828 aa20.56■□□□□ 0.88
GTF3C2-212ENST00000493511 RNPC3Q96LT9 517 aaKnown RBP20.56■□□□□ 0.88
GTF3C2-212ENST00000493511 C16orf70Q9BSU1 422 aa20.56■□□□□ 0.88
GTF3C2-212ENST00000493511 KCNH7Q9NS40 1196 aa20.56■□□□□ 0.88
GTF3C2-212ENST00000493511 VPS54Q9P1Q0 977 aa20.56■□□□□ 0.88
GTF3C2-212ENST00000493511 GTF2IRD1Q9UHL9 959 aa20.56■□□□□ 0.88
GTF3C2-212ENST00000493511 TPCN1Q9ULQ1 816 aa20.56■□□□□ 0.88
GTF3C2-212ENST00000493511 H3BRB1 525 aa20.55■□□□□ 0.88
GTF3C2-212ENST00000493511 PITPNM1O00562 1244 aa20.55■□□□□ 0.88
GTF3C2-212ENST00000493511 PFKFB2O60825 505 aa20.55■□□□□ 0.88
GTF3C2-212ENST00000493511 ATP9AO75110 1047 aa20.55■□□□□ 0.88
GTF3C2-212ENST00000493511 ZNF76P36508 570 aa20.55■□□□□ 0.88
GTF3C2-212ENST00000493511 NEK4P51957 841 aa20.55■□□□□ 0.88
GTF3C2-212ENST00000493511 SP4Q02446 784 aa20.55■□□□□ 0.88
GTF3C2-212ENST00000493511 SCRN1Q12765 414 aa20.55■□□□□ 0.88
GTF3C2-212ENST00000493511 BFSP2Q13515 415 aa20.55■□□□□ 0.88
GTF3C2-212ENST00000493511 PSRC1Q6PGN9 363 aaPredicted RBP20.55■□□□□ 0.88
GTF3C2-212ENST00000493511 CCDC155Q8N6L0 562 aa20.55■□□□□ 0.88
GTF3C2-212ENST00000493511 LRCH3Q96II8 777 aa20.55■□□□□ 0.88
GTF3C2-212ENST00000493511 TUT1Q9H6E5 874 aaKnown RBP20.55■□□□□ 0.88
GTF3C2-212ENST00000493511 HDAC6Q9UBN7 1215 aa20.55■□□□□ 0.88
GTF3C2-212ENST00000493511 ZNF215Q9UL58 517 aaPredicted RBP20.55■□□□□ 0.88
GTF3C2-212ENST00000493511 UMODL1Q5DID0 1318 aa20.54■□□□□ 0.88
GTF3C2-212ENST00000493511 CCL23P55773 120 aa20.54■□□□□ 0.88
GTF3C2-212ENST00000493511 NLRP5P59047 1200 aa20.54■□□□□ 0.88
GTF3C2-212ENST00000493511 C8orf34Q49A92 452 aa20.54■□□□□ 0.88
GTF3C2-212ENST00000493511 GDF6Q6KF10 455 aaPredicted RBP20.54■□□□□ 0.88
GTF3C2-212ENST00000493511 NIPA1Q7RTP0 329 aa20.54■□□□□ 0.88
GTF3C2-212ENST00000493511 RETREG2Q8NC44 543 aa20.54■□□□□ 0.88
GTF3C2-212ENST00000493511 WNT8AQ9H1J5 351 aa20.54■□□□□ 0.88
GTF3C2-212ENST00000493511 IL23AQ9NPF7 189 aa20.54■□□□□ 0.88
GTF3C2-212ENST00000493511 PKD2L1Q9P0L9 805 aa20.54■□□□□ 0.88
GTF3C2-212ENST00000493511 MEIS1O00470 390 aa20.53■□□□□ 0.88
GTF3C2-212ENST00000493511 CYP3A4P08684 503 aa20.53■□□□□ 0.88
GTF3C2-212ENST00000493511 RPUSD2Q8IZ73 545 aaKnown RBP20.53■□□□□ 0.88
GTF3C2-212ENST00000493511 CYP2W1Q8TAV3 490 aa20.53■□□□□ 0.88
GTF3C2-212ENST00000493511 CAGE1Q8TC20 777 aa20.53■□□□□ 0.88
GTF3C2-212ENST00000493511 SEPT1Q8WYJ6 367 aa20.53■□□□□ 0.88
GTF3C2-212ENST00000493511 SDF4Q9BRK5 362 aa20.53■□□□□ 0.88
GTF3C2-212ENST00000493511 JPH1Q9HDC5 661 aaPredicted RBP20.53■□□□□ 0.88
GTF3C2-212ENST00000493511 DOCK5Q9H7D0 1870 aa20.53■□□□□ 0.88
GTF3C2-212ENST00000493511 TCF7P36402 384 aaPredicted RBP20.52■□□□□ 0.88
GTF3C2-212ENST00000493511 GALNT17Q6IS24 598 aa20.52■□□□□ 0.88
GTF3C2-212ENST00000493511 CRYGNQ8WXF5 182 aa20.52■□□□□ 0.88
GTF3C2-212ENST00000493511 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.52■□□□□ 0.88
GTF3C2-212ENST00000493511 NFASCO94856 1347 aa20.52■□□□□ 0.87
GTF3C2-212ENST00000493511 STK36Q9NRP7 1315 aa20.52■□□□□ 0.87
GTF3C2-212ENST00000493511 PFKMP08237 780 aa20.51■□□□□ 0.87
GTF3C2-212ENST00000493511 XBP1P17861 261 aa20.51■□□□□ 0.87
GTF3C2-212ENST00000493511 RFC2P35250 354 aa20.51■□□□□ 0.87
GTF3C2-212ENST00000493511 SETQ01105 290 aaPredicted RBP20.51■□□□□ 0.87
GTF3C2-212ENST00000493511 TMEM240Q5SV17 173 aa20.51■□□□□ 0.87
GTF3C2-212ENST00000493511 UTP14CQ5TAP6 766 aaKnown RBP20.51■□□□□ 0.87
GTF3C2-212ENST00000493511 C16orf59Q7L2K0 433 aa20.51■□□□□ 0.87
GTF3C2-212ENST00000493511 C22orf23Q9BZE7 217 aa20.51■□□□□ 0.87
GTF3C2-212ENST00000493511 MTIF3Q9H2K0 278 aaKnown RBP20.51■□□□□ 0.87
GTF3C2-212ENST00000493511 AGO4Q9HCK5 861 aaKnown RBP20.51■□□□□ 0.87
GTF3C2-212ENST00000493511 SLC9A2Q9UBY0 812 aa20.51■□□□□ 0.87
GTF3C2-212ENST00000493511 PCDHA4Q9UN74 947 aa20.51■□□□□ 0.87
GTF3C2-212ENST00000493511 C17orf102A2RUQ5 167 aa20.5■□□□□ 0.87
GTF3C2-212ENST00000493511 FAM86B1E9PN63 330 aa20.5■□□□□ 0.87
GTF3C2-212ENST00000493511 FAM86B2P0C5J1 330 aa20.5■□□□□ 0.87
GTF3C2-212ENST00000493511 ARP10275 920 aa20.5■□□□□ 0.87
GTF3C2-212ENST00000493511 ACRP10323 421 aa20.5■□□□□ 0.87
GTF3C2-212ENST00000493511 GNAT1P11488 350 aa20.5■□□□□ 0.87
GTF3C2-212ENST00000493511 PTK7Q13308 1070 aa20.5■□□□□ 0.87
GTF3C2-212ENST00000493511 ZNF365Q70YC5 407 aa20.5■□□□□ 0.87
GTF3C2-212ENST00000493511 PLA2G4DQ86XP0 818 aa20.5■□□□□ 0.87
GTF3C2-212ENST00000493511 TRIM50Q86XT4 487 aa20.5■□□□□ 0.87
GTF3C2-212ENST00000493511 RASGRP4Q8TDF6 673 aa20.5■□□□□ 0.87
GTF3C2-212ENST00000493511 AFAP1L1Q8TED9 768 aa20.5■□□□□ 0.87
GTF3C2-212ENST00000493511 WASF1Q92558 559 aa20.5■□□□□ 0.87
GTF3C2-212ENST00000493511 SCLYQ96I15 445 aa20.5■□□□□ 0.87
GTF3C2-212ENST00000493511 CTAGE1Q96RT6 745 aa20.5■□□□□ 0.87
GTF3C2-212ENST00000493511 ADAMTS3O15072 1205 aa20.49■□□□□ 0.87
GTF3C2-212ENST00000493511 FGBP02675 491 aa20.49■□□□□ 0.87
GTF3C2-212ENST00000493511 SMIM10L2AP0DMW4 78 aa20.49■□□□□ 0.87
GTF3C2-212ENST00000493511 SMIM10L2BP0DMW5 78 aa20.49■□□□□ 0.87
GTF3C2-212ENST00000493511 SMAD3P84022 425 aaKnown RBP20.49■□□□□ 0.87
GTF3C2-212ENST00000493511 RBL2Q08999 1139 aa20.49■□□□□ 0.87
GTF3C2-212ENST00000493511 ME3Q16798 604 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms