RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 QRICH1Q2TAL8 776 aa16.62■□□□□ 0.25
PRPF40A-211ENST00000493468 MFSD6Q6ZSS7 791 aa16.62■□□□□ 0.25
PRPF40A-211ENST00000493468 ADGRF4Q8IZF3 695 aa16.62■□□□□ 0.25
PRPF40A-211ENST00000493468 FIBCD1Q8N539 461 aa16.62■□□□□ 0.25
PRPF40A-211ENST00000493468 OTUD7AQ8TE49 926 aaPredicted RBP16.62■□□□□ 0.25
PRPF40A-211ENST00000493468 CLP1Q92989 425 aaKnown RBP16.62■□□□□ 0.25
PRPF40A-211ENST00000493468 IL17RAQ96F46 866 aa16.62■□□□□ 0.25
PRPF40A-211ENST00000493468 PHOX2BQ99453 314 aa16.62■□□□□ 0.25
PRPF40A-211ENST00000493468 PDCD2LQ9BRP1 358 aa16.62■□□□□ 0.25
PRPF40A-211ENST00000493468 CPVLQ9H3G5 476 aa16.62■□□□□ 0.25
PRPF40A-211ENST00000493468 RC3H2Q9HBD1 1191 aaKnown RBP16.62■□□□□ 0.25
PRPF40A-211ENST00000493468 MAP3K20Q9NYL2 800 aaKnown RBP16.62■□□□□ 0.25
PRPF40A-211ENST00000493468 SALL3Q9BXA9 1300 aa16.62■□□□□ 0.25
PRPF40A-211ENST00000493468 TTC3P53804 2025 aa16.62■□□□□ 0.25
PRPF40A-211ENST00000493468 KAT6AQ92794 2004 aa16.62■□□□□ 0.25
PRPF40A-211ENST00000493468 RBAK-RBAKDNI3L0D1 243 aa16.61■□□□□ 0.25
PRPF40A-211ENST00000493468 STXBP3O00186 592 aa16.61■□□□□ 0.25
PRPF40A-211ENST00000493468 TBX10O75333 385 aa16.61■□□□□ 0.25
PRPF40A-211ENST00000493468 GGPS1O95749 300 aa16.61■□□□□ 0.25
PRPF40A-211ENST00000493468 SMIM10L2AP0DMW4 78 aa16.61■□□□□ 0.25
PRPF40A-211ENST00000493468 SMIM10L2BP0DMW5 78 aa16.61■□□□□ 0.25
PRPF40A-211ENST00000493468 BMPR1AP36894 532 aa16.61■□□□□ 0.25
PRPF40A-211ENST00000493468 ASPRV1Q53RT3 343 aa16.61■□□□□ 0.25
PRPF40A-211ENST00000493468 CCDC178Q5BJE1 867 aa16.61■□□□□ 0.25
PRPF40A-211ENST00000493468 FAM26DQ5JW98 314 aa16.61■□□□□ 0.25
PRPF40A-211ENST00000493468 C20orf194Q5TEA3 1177 aa16.61■□□□□ 0.25
PRPF40A-211ENST00000493468 PNMA1Q8ND90 353 aa16.61■□□□□ 0.25
PRPF40A-211ENST00000493468 EVI5LQ96CN4 794 aa16.61■□□□□ 0.25
PRPF40A-211ENST00000493468 RNF41Q9H4P4 317 aaPredicted RBP16.61■□□□□ 0.25
PRPF40A-211ENST00000493468 CD207Q9UJ71 328 aa16.61■□□□□ 0.25
PRPF40A-211ENST00000493468 CCDC171Q6TFL3 1326 aa16.61■□□□□ 0.25
PRPF40A-211ENST00000493468 ADGRA3Q8IWK6 1321 aa16.61■□□□□ 0.25
PRPF40A-211ENST00000493468 KIAA1671Q9BY89 1806 aa16.61■□□□□ 0.25
PRPF40A-211ENST00000493468 TMEM221A6NGB7 291 aa16.6■□□□□ 0.25
PRPF40A-211ENST00000493468 H3BRB1 525 aa16.6■□□□□ 0.25
PRPF40A-211ENST00000493468 M0R296 226 aa16.6■□□□□ 0.25
PRPF40A-211ENST00000493468 GRM6O15303 877 aa16.6■□□□□ 0.25
PRPF40A-211ENST00000493468 TREHO43280 583 aa16.6■□□□□ 0.25
PRPF40A-211ENST00000493468 EYA4O95677 639 aa16.6■□□□□ 0.25
PRPF40A-211ENST00000493468 MMP1P03956 469 aa16.6■□□□□ 0.25
PRPF40A-211ENST00000493468 UBA1P22314 1058 aaKnown RBP16.6■□□□□ 0.25
PRPF40A-211ENST00000493468 CLUL1Q15846 466 aa16.6■□□□□ 0.25
PRPF40A-211ENST00000493468 MCMDC2Q4G0Z9 681 aa16.6■□□□□ 0.25
PRPF40A-211ENST00000493468 TRIM67Q6ZTA4 783 aa16.6■□□□□ 0.25
PRPF40A-211ENST00000493468 STOX1Q6ZVD7 989 aa16.6■□□□□ 0.25
PRPF40A-211ENST00000493468 SAMD3Q8N6K7 520 aa16.6■□□□□ 0.25
PRPF40A-211ENST00000493468 ESR2Q92731 530 aa16.6■□□□□ 0.25
PRPF40A-211ENST00000493468 OSBPL7Q9BZF2 842 aa16.6■□□□□ 0.25
PRPF40A-211ENST00000493468 TUT1Q9H6E5 874 aaKnown RBP16.6■□□□□ 0.25
PRPF40A-211ENST00000493468 RCAN3Q9UKA8 241 aa16.6■□□□□ 0.25
PRPF40A-211ENST00000493468 OPLAHO14841 1288 aa16.59■□□□□ 0.25
PRPF40A-211ENST00000493468 CFBP00751 764 aa16.59■□□□□ 0.25
PRPF40A-211ENST00000493468 LGALS2P05162 132 aa16.59■□□□□ 0.25
PRPF40A-211ENST00000493468 CTSHP09668 335 aa16.59■□□□□ 0.25
PRPF40A-211ENST00000493468 GNAT1P11488 350 aa16.59■□□□□ 0.25
PRPF40A-211ENST00000493468 HAND2P61296 217 aa16.59■□□□□ 0.25
PRPF40A-211ENST00000493468 VSIG10LQ86VR7 867 aa16.59■□□□□ 0.25
PRPF40A-211ENST00000493468 TBC1D10CQ8IV04 446 aa16.59■□□□□ 0.25
PRPF40A-211ENST00000493468 MSLNLQ96KJ4 702 aa16.59■□□□□ 0.25
PRPF40A-211ENST00000493468 PLVAPQ9BX97 442 aa16.59■□□□□ 0.25
PRPF40A-211ENST00000493468 RNPEPQ9H4A4 650 aa16.59■□□□□ 0.25
PRPF40A-211ENST00000493468 A0A0D9SFI3 127 aa16.58■□□□□ 0.24
PRPF40A-211ENST00000493468 SP2Q02086 613 aa16.58■□□□□ 0.24
PRPF40A-211ENST00000493468 TCF15Q12870 199 aa16.58■□□□□ 0.24
PRPF40A-211ENST00000493468 ADAM15Q13444 863 aa16.58■□□□□ 0.24
PRPF40A-211ENST00000493468 CBX2Q14781 532 aaPredicted RBP16.58■□□□□ 0.24
PRPF40A-211ENST00000493468 PGM5Q15124 567 aa16.58■□□□□ 0.24
PRPF40A-211ENST00000493468 IER5LQ5T953 404 aa16.58■□□□□ 0.24
PRPF40A-211ENST00000493468 SUGP1Q8IWZ8 645 aaKnown RBP16.58■□□□□ 0.24
PRPF40A-211ENST00000493468 PPP2R3CQ969Q6 453 aa16.58■□□□□ 0.24
PRPF40A-211ENST00000493468 PBXIP1Q96AQ6 731 aa16.58■□□□□ 0.24
PRPF40A-211ENST00000493468 AMNQ9BXJ7 453 aa16.58■□□□□ 0.24
PRPF40A-211ENST00000493468 JMJD4Q9H9V9 463 aa16.58■□□□□ 0.24
PRPF40A-211ENST00000493468 MLXIPQ9HAP2 919 aa16.58■□□□□ 0.24
PRPF40A-211ENST00000493468 NEDD4P46934 1319 aa16.58■□□□□ 0.24
PRPF40A-211ENST00000493468 DOCK5Q9H7D0 1870 aa16.58■□□□□ 0.24
PRPF40A-211ENST00000493468 LOC730098B7Z3J9 87 aa16.57■□□□□ 0.24
PRPF40A-211ENST00000493468 MYCLP12524 364 aaPredicted RBP16.57■□□□□ 0.24
PRPF40A-211ENST00000493468 ADAM17P78536 824 aa16.57■□□□□ 0.24
PRPF40A-211ENST00000493468 IQCA1Q86XH1 822 aa16.57■□□□□ 0.24
PRPF40A-211ENST00000493468 FBXL6Q8N531 539 aa16.57■□□□□ 0.24
PRPF40A-211ENST00000493468 SMRP1Q8NCR6 262 aa16.57■□□□□ 0.24
PRPF40A-211ENST00000493468 P2RX5Q93086 422 aa16.57■□□□□ 0.24
PRPF40A-211ENST00000493468 ZNF689Q96CS4 500 aaPredicted RBP16.57■□□□□ 0.24
PRPF40A-211ENST00000493468 FAM227BQ96M60 508 aa16.57■□□□□ 0.24
PRPF40A-211ENST00000493468 USP26Q9BXU7 913 aa16.57■□□□□ 0.24
PRPF40A-211ENST00000493468 KAT14Q9H8E8 782 aa16.57■□□□□ 0.24
PRPF40A-211ENST00000493468 PARP1P09874 1014 aaKnown RBP16.56■□□□□ 0.24
PRPF40A-211ENST00000493468 CCND2P30279 289 aa16.56■□□□□ 0.24
PRPF40A-211ENST00000493468 GTF2F1P35269 517 aaKnown RBP eCLIP16.56■□□□□ 0.24
PRPF40A-211ENST00000493468 ZXDAP98168 799 aa16.56■□□□□ 0.24
PRPF40A-211ENST00000493468 FOXK2Q01167 660 aa16.56■□□□□ 0.24
PRPF40A-211ENST00000493468 COASYQ13057 564 aa16.56■□□□□ 0.24
PRPF40A-211ENST00000493468 NAALADL2Q58DX5 795 aa16.56■□□□□ 0.24
PRPF40A-211ENST00000493468 ZNF589Q86UQ0 364 aaPredicted RBP16.56■□□□□ 0.24
PRPF40A-211ENST00000493468 IL31RAQ8NI17 732 aa16.56■□□□□ 0.24
PRPF40A-211ENST00000493468 ZKSCAN3Q9BRR0 538 aa16.56■□□□□ 0.24
PRPF40A-211ENST00000493468 IRF2BPLQ9H1B7 796 aa16.56■□□□□ 0.24
PRPF40A-211ENST00000493468 EHMT1Q9H9B1 1298 aa16.56■□□□□ 0.24
PRPF40A-211ENST00000493468 ALG13Q9NP73 1137 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms