RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 ZP2Q05996 745 aa20.53■□□□□ 0.88
NUP50-218ENST00000493456 TCEAL5Q5H9L2 206 aa20.53■□□□□ 0.88
NUP50-218ENST00000493456 RILPL2Q969X0 211 aa20.53■□□□□ 0.88
NUP50-218ENST00000493456 MTMR8Q96EF0 704 aa20.53■□□□□ 0.88
NUP50-218ENST00000493456 RALGAPA2Q2PPJ7 1873 aa20.52■□□□□ 0.88
NUP50-218ENST00000493456 POTEB3A0JP26 581 aa20.52■□□□□ 0.88
NUP50-218ENST00000493456 ZBTB5O15062 677 aa20.52■□□□□ 0.88
NUP50-218ENST00000493456 SORBS3O60504 671 aa20.52■□□□□ 0.88
NUP50-218ENST00000493456 LGALS2P05162 132 aa20.52■□□□□ 0.88
NUP50-218ENST00000493456 SMIM10L2AP0DMW4 78 aa20.52■□□□□ 0.88
NUP50-218ENST00000493456 SMIM10L2BP0DMW5 78 aa20.52■□□□□ 0.88
NUP50-218ENST00000493456 GNAT1P11488 350 aa20.52■□□□□ 0.88
NUP50-218ENST00000493456 SDSP20132 328 aa20.52■□□□□ 0.88
NUP50-218ENST00000493456 CCND2P30279 289 aa20.52■□□□□ 0.88
NUP50-218ENST00000493456 SP2Q02086 613 aa20.52■□□□□ 0.88
NUP50-218ENST00000493456 TRAF1Q13077 416 aa20.52■□□□□ 0.88
NUP50-218ENST00000493456 POTEBQ6S5H4 581 aa20.52■□□□□ 0.88
NUP50-218ENST00000493456 UBAC1Q9BSL1 405 aa20.52■□□□□ 0.88
NUP50-218ENST00000493456 KRT23Q9C075 422 aa20.52■□□□□ 0.88
NUP50-218ENST00000493456 ZSWIM5Q9P217 1185 aa20.52■□□□□ 0.88
NUP50-218ENST00000493456 PCDHA1Q9Y5I3 950 aa20.52■□□□□ 0.88
NUP50-218ENST00000493456 TREHO43280 583 aa20.51■□□□□ 0.87
NUP50-218ENST00000493456 UPP2O95045 317 aa20.51■□□□□ 0.87
NUP50-218ENST00000493456 HDAC1Q13547 482 aaPredicted RBP20.51■□□□□ 0.87
NUP50-218ENST00000493456 IMMTQ16891 758 aaKnown RBP20.51■□□□□ 0.87
NUP50-218ENST00000493456 ADHFE1Q8IWW8 467 aa20.51■□□□□ 0.87
NUP50-218ENST00000493456 USP26Q9BXU7 913 aa20.51■□□□□ 0.87
NUP50-218ENST00000493456 IFIH1Q9BYX4 1025 aaKnown RBP20.51■□□□□ 0.87
NUP50-218ENST00000493456 UPF3BQ9BZI7 483 aaKnown RBP20.51■□□□□ 0.87
NUP50-218ENST00000493456 CNNM2Q9H8M5 875 aa20.51■□□□□ 0.87
NUP50-218ENST00000493456 NLRC5Q86WI3 1866 aa20.51■□□□□ 0.87
NUP50-218ENST00000493456 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.5■□□□□ 0.87
NUP50-218ENST00000493456 C19orf67A6NJJ6 358 aa20.5■□□□□ 0.87
NUP50-218ENST00000493456 NOP56O00567 594 aaKnown RBP20.5■□□□□ 0.87
NUP50-218ENST00000493456 PPP1R11O60927 126 aaPredicted RBP20.5■□□□□ 0.87
NUP50-218ENST00000493456 CTSHP09668 335 aa20.5■□□□□ 0.87
NUP50-218ENST00000493456 HOXA13P31271 388 aaPredicted RBP20.5■□□□□ 0.87
NUP50-218ENST00000493456 GNPTABQ3T906 1256 aa20.5■□□□□ 0.87
NUP50-218ENST00000493456 IFIT1BQ5T764 474 aaKnown RBP20.5■□□□□ 0.87
NUP50-218ENST00000493456 EP400NLQ6ZTU2 488 aa20.5■□□□□ 0.87
NUP50-218ENST00000493456 STAG2Q8N3U4 1231 aa20.5■□□□□ 0.87
NUP50-218ENST00000493456 IL31RAQ8NI17 732 aa20.5■□□□□ 0.87
NUP50-218ENST00000493456 LMAN2LQ9H0V9 348 aa20.5■□□□□ 0.87
NUP50-218ENST00000493456 RNPEPQ9H4A4 650 aa20.5■□□□□ 0.87
NUP50-218ENST00000493456 CLDND1Q9NY35 253 aa20.5■□□□□ 0.87
NUP50-218ENST00000493456 RWDD3Q9Y3V2 267 aa20.5■□□□□ 0.87
NUP50-218ENST00000493456 KLRF2D3W0D1 207 aa20.49■□□□□ 0.87
NUP50-218ENST00000493456 C5orf67F2Z3F1 127 aa20.49■□□□□ 0.87
NUP50-218ENST00000493456 GCOM1H8Y6P7 765 aaPredicted RBP20.49■□□□□ 0.87
NUP50-218ENST00000493456 RB1P06400 928 aa20.49■□□□□ 0.87
NUP50-218ENST00000493456 POLR2MP0CAP2 368 aa20.49■□□□□ 0.87
NUP50-218ENST00000493456 MRE11P49959 708 aa20.49■□□□□ 0.87
NUP50-218ENST00000493456 IL17RAQ96F46 866 aa20.49■□□□□ 0.87
NUP50-218ENST00000493456 POP1Q99575 1024 aaKnown RBP20.49■□□□□ 0.87
NUP50-218ENST00000493456 DSCC1Q9BVC3 393 aa20.49■□□□□ 0.87
NUP50-218ENST00000493456 RBAK-RBAKDNI3L0D1 243 aa20.48■□□□□ 0.87
NUP50-218ENST00000493456 STAM2O75886 525 aa20.48■□□□□ 0.87
NUP50-218ENST00000493456 CTNNB1P35222 781 aa20.48■□□□□ 0.87
NUP50-218ENST00000493456 NHLH1Q02575 133 aa20.48■□□□□ 0.87
NUP50-218ENST00000493456 NEDD9Q14511 834 aa20.48■□□□□ 0.87
NUP50-218ENST00000493456 METTL7BQ6UX53 244 aa20.48■□□□□ 0.87
NUP50-218ENST00000493456 RPAINQ86UA6 219 aa20.48■□□□□ 0.87
NUP50-218ENST00000493456 FIBCD1Q8N539 461 aa20.48■□□□□ 0.87
NUP50-218ENST00000493456 GPKOWQ92917 476 aaPredicted RBP eCLIP20.48■□□□□ 0.87
NUP50-218ENST00000493456 C11orf84Q9BUA3 381 aaPredicted RBP20.48■□□□□ 0.87
NUP50-218ENST00000493456 DIAPH3Q9NSV4 1193 aa20.48■□□□□ 0.87
NUP50-218ENST00000493456 MAD2L2Q9UI95 211 aa20.48■□□□□ 0.87
NUP50-218ENST00000493456 ZNF215Q9UL58 517 aaPredicted RBP20.48■□□□□ 0.87
NUP50-218ENST00000493456 HIP1O00291 1037 aa20.47■□□□□ 0.87
NUP50-218ENST00000493456 ICAM3P32942 547 aa20.47■□□□□ 0.87
NUP50-218ENST00000493456 CTC1Q2NKJ3 1217 aa20.47■□□□□ 0.87
NUP50-218ENST00000493456 FAM26DQ5JW98 314 aa20.47■□□□□ 0.87
NUP50-218ENST00000493456 CWC27Q6UX04 472 aaKnown RBP20.47■□□□□ 0.87
NUP50-218ENST00000493456 FBXL18Q96ME1 805 aa20.47■□□□□ 0.87
NUP50-218ENST00000493456 LNPKQ9C0E8 428 aa20.47■□□□□ 0.87
NUP50-218ENST00000493456 FRMPD4Q14CM0 1322 aa20.47■□□□□ 0.87
NUP50-218ENST00000493456 PALM3A6NDB9 673 aaPredicted RBP20.46■□□□□ 0.87
NUP50-218ENST00000493456 SMAD2Q15796 467 aaKnown RBP20.46■□□□□ 0.87
NUP50-218ENST00000493456 INPP4AQ96PE3 977 aaPredicted RBP20.46■□□□□ 0.87
NUP50-218ENST00000493456 GPR20Q99678 358 aa20.46■□□□□ 0.87
NUP50-218ENST00000493456 OSBPL7Q9BZF2 842 aa20.46■□□□□ 0.87
NUP50-218ENST00000493456 USP34Q70CQ2 3546 aa20.45■□□□□ 0.86
NUP50-218ENST00000493456 IRS1P35568 1242 aa20.45■□□□□ 0.86
NUP50-218ENST00000493456 BMPR1AP36894 532 aa20.45■□□□□ 0.86
NUP50-218ENST00000493456 LTBRP36941 435 aa20.45■□□□□ 0.86
NUP50-218ENST00000493456 RRP1P56182 461 aaKnown RBP20.45■□□□□ 0.86
NUP50-218ENST00000493456 ADAM17P78536 824 aa20.45■□□□□ 0.86
NUP50-218ENST00000493456 SEC23AQ15436 765 aa20.45■□□□□ 0.86
NUP50-218ENST00000493456 FCHSD1Q86WN1 690 aa20.45■□□□□ 0.86
NUP50-218ENST00000493456 HOMER1Q86YM7 354 aa20.45■□□□□ 0.86
NUP50-218ENST00000493456 MFSD14AQ96MC6 490 aa20.45■□□□□ 0.86
NUP50-218ENST00000493456 SETD4Q9NVD3 440 aa20.45■□□□□ 0.86
NUP50-218ENST00000493456 ADGRA3Q8IWK6 1321 aa20.45■□□□□ 0.86
NUP50-218ENST00000493456 SPATA31C2B4DYI2 1134 aa20.44■□□□□ 0.86
NUP50-218ENST00000493456 FIBPO43427 364 aa20.44■□□□□ 0.86
NUP50-218ENST00000493456 LINC00271P0C7V0 271 aa20.44■□□□□ 0.86
NUP50-218ENST00000493456 ARHGAP4P98171 946 aa20.44■□□□□ 0.86
NUP50-218ENST00000493456 HFE2Q6ZVN8 426 aa20.44■□□□□ 0.86
NUP50-218ENST00000493456 CYFIP1Q7L576 1253 aa20.44■□□□□ 0.86
NUP50-218ENST00000493456 LMBR1Q8WVP7 490 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms