RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 TTBK2Q6IQ55 1244 aa7.84□□□□□ -1.15
VPS52-219ENST00000493379 SND1Q7KZF4 910 aaKnown RBP eCLIP7.84□□□□□ -1.15
VPS52-219ENST00000493379 PRSS33Q8NF86 280 aa7.84□□□□□ -1.15
VPS52-219ENST00000493379 TANGO6Q9C0B7 1094 aa7.84□□□□□ -1.15
VPS52-219ENST00000493379 PORCNQ9H237 461 aa7.84□□□□□ -1.15
VPS52-219ENST00000493379 FAM86C1Q9NVL1 165 aa7.84□□□□□ -1.15
VPS52-219ENST00000493379 MTMR7Q9Y216 660 aa7.84□□□□□ -1.15
VPS52-219ENST00000493379 DIS3Q9Y2L1 958 aaKnown RBP7.84□□□□□ -1.15
VPS52-219ENST00000493379 MYO15AQ9UKN7 3530 aa7.84□□□□□ -1.15
VPS52-219ENST00000493379 DNAJC25-GNG10A0A024R161 153 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 ERICH2A1L162 156 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 ZBTB24O43167 697 aaPredicted RBP7.83□□□□□ -1.16
VPS52-219ENST00000493379 PEX10O60683 326 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 ZBED4O75132 1171 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 ICAM1P05362 532 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 CALM1P0DP23 149 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 CALM2P0DP24 149 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 CALM3P0DP25 149 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 CAPN2P17655 700 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 ERCC3P19447 782 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 RPS6KB1P23443 525 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 RBM25P49756 843 aaKnown RBP7.83□□□□□ -1.16
VPS52-219ENST00000493379 GHRHRQ02643 423 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 SLC35G1Q2M3R5 365 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 PLA2G2CQ5R387 149 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 KCTD1Q719H9 257 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 RUFY3Q7L099 469 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 CHST3Q7LGC8 479 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 GPR142Q7Z601 462 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 PLEKHH3Q7Z736 793 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 SAMD3Q8N6K7 520 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 CHST13Q8NET6 341 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 BADQ92934 168 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 COA7Q96BR5 231 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 TEX13BQ9BXU2 312 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 OGDHLQ9ULD0 1010 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 RIPK3Q9Y572 518 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 PCDHGA11Q9Y5H2 935 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 MYH8P13535 1937 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 NID2Q14112 1375 aa7.83□□□□□ -1.16
VPS52-219ENST00000493379 FAM186AA6NE01 2351 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 A0A0G2JMZ2 1700 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 KLRF2D3W0D1 207 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 CYTH3O43739 400 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 PARP1P09874 1014 aaKnown RBP7.82□□□□□ -1.16
VPS52-219ENST00000493379 GNAQP50148 359 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 USP4Q13107 963 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 MAP3K21Q5TCX8 1036 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 SYDE2Q5VT97 1194 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 APOA5Q6Q788 366 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 BLOC1S2Q6QNY1 142 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 RASGRP2Q7LDG7 609 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 CATIPQ7Z7H3 387 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 TEX2Q8IWB9 1127 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 ADGRF4Q8IZF3 695 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 ZNF654Q8IZM8 581 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 STAG2Q8N3U4 1231 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 FANCBQ8NB91 859 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 SOCS4Q8WXH5 440 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 TIFAQ96CG3 184 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 RNPC3Q96LT9 517 aaKnown RBP7.82□□□□□ -1.16
VPS52-219ENST00000493379 KIF2CQ99661 725 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 LZTS2Q9BRK4 669 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 SPZ1Q9BXG8 430 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 JMJD4Q9H9V9 463 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 HCSTQ9UBK5 93 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 FBXO40Q9UH90 709 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 PCDHB11Q9Y5F2 797 aa7.82□□□□□ -1.16
VPS52-219ENST00000493379 PRRC2BQ5JSZ5 2229 aaKnown RBP7.82□□□□□ -1.16
VPS52-219ENST00000493379 TRIOO75962 3097 aa7.81□□□□□ -1.16
VPS52-219ENST00000493379 PARP14Q460N5 1801 aa7.81□□□□□ -1.16
VPS52-219ENST00000493379 LOC102724159A0A0B4J2E5 919 aa7.81□□□□□ -1.16
VPS52-219ENST00000493379 TNPO2O14787 897 aaKnown RBP7.81□□□□□ -1.16
VPS52-219ENST00000493379 COBLO75128 1261 aa7.81□□□□□ -1.16
VPS52-219ENST00000493379 KIF5BP33176 963 aa7.81□□□□□ -1.16
VPS52-219ENST00000493379 SLC16A2P36021 539 aa7.81□□□□□ -1.16
VPS52-219ENST00000493379 EPHB4P54760 987 aa7.81□□□□□ -1.16
VPS52-219ENST00000493379 SEC13P55735 322 aa7.81□□□□□ -1.16
VPS52-219ENST00000493379 WNT7BP56706 349 aa7.81□□□□□ -1.16
VPS52-219ENST00000493379 SKOR1P84550 965 aa7.81□□□□□ -1.16
VPS52-219ENST00000493379 TOB2Q14106 344 aaPredicted RBP7.81□□□□□ -1.16
VPS52-219ENST00000493379 PWP2Q15269 919 aaKnown RBP7.81□□□□□ -1.16
VPS52-219ENST00000493379 ZNF792Q3KQV3 632 aa7.81□□□□□ -1.16
VPS52-219ENST00000493379 OLFML2BQ68BL8 750 aa7.81□□□□□ -1.16
VPS52-219ENST00000493379 MAMDC4Q6UXC1 1216 aa7.81□□□□□ -1.16
VPS52-219ENST00000493379 MSL3Q8N5Y2 521 aaKnown RBP7.81□□□□□ -1.16
VPS52-219ENST00000493379 CLEC4DQ8WXI8 215 aa7.81□□□□□ -1.16
VPS52-219ENST00000493379 KIFC2Q96AC6 838 aa7.81□□□□□ -1.16
VPS52-219ENST00000493379 ZNF274Q96GC6 653 aaPredicted RBP7.81□□□□□ -1.16
VPS52-219ENST00000493379 AGBL1Q96MI9 1066 aa7.81□□□□□ -1.16
VPS52-219ENST00000493379 JAKMIP1Q96N16 626 aaKnown RBP7.81□□□□□ -1.16
VPS52-219ENST00000493379 KCTD15Q96SI1 283 aaPredicted RBP7.81□□□□□ -1.16
VPS52-219ENST00000493379 PAGR1Q9BTK6 254 aa7.81□□□□□ -1.16
VPS52-219ENST00000493379 UBA5Q9GZZ9 404 aa7.81□□□□□ -1.16
VPS52-219ENST00000493379 KCNH6Q9H252 994 aa7.81□□□□□ -1.16
VPS52-219ENST00000493379 MAP3K20Q9NYL2 800 aaKnown RBP7.81□□□□□ -1.16
VPS52-219ENST00000493379 DACH1Q9UI36 760 aa7.81□□□□□ -1.16
VPS52-219ENST00000493379 BRPF3Q9ULD4 1205 aa7.81□□□□□ -1.16
VPS52-219ENST00000493379 SLC12A7Q9Y666 1083 aa7.81□□□□□ -1.16
VPS52-219ENST00000493379 MYH4Q9Y623 1939 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms