RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 NOP56O00567 594 aaKnown RBP25.51■■□□□ 1.67
LYSMD4-208ENST00000493256 ARHGEF15O94989 841 aa25.51■■□□□ 1.67
LYSMD4-208ENST00000493256 KCNJ6P48051 423 aa25.51■■□□□ 1.67
LYSMD4-208ENST00000493256 WDR5P61964 334 aaKnown RBP25.51■■□□□ 1.67
LYSMD4-208ENST00000493256 CCDC85BQ15834 202 aaPredicted RBP25.51■■□□□ 1.67
LYSMD4-208ENST00000493256 XRRA1Q6P2D8 792 aa25.51■■□□□ 1.67
LYSMD4-208ENST00000493256 TMTC3Q6ZXV5 915 aa25.51■■□□□ 1.67
LYSMD4-208ENST00000493256 SGMS1Q86VZ5 419 aa25.51■■□□□ 1.67
LYSMD4-208ENST00000493256 CCDC82Q8N4S0 544 aa25.51■■□□□ 1.67
LYSMD4-208ENST00000493256 GPR20Q99678 358 aa25.51■■□□□ 1.67
LYSMD4-208ENST00000493256 TUT1Q9H6E5 874 aaKnown RBP25.51■■□□□ 1.67
LYSMD4-208ENST00000493256 SMIM10L2AP0DMW4 78 aa25.5■■□□□ 1.67
LYSMD4-208ENST00000493256 SMIM10L2BP0DMW5 78 aa25.5■■□□□ 1.67
LYSMD4-208ENST00000493256 HOXC8P31273 242 aa25.5■■□□□ 1.67
LYSMD4-208ENST00000493256 MBTPS1Q14703 1052 aa25.5■■□□□ 1.67
LYSMD4-208ENST00000493256 SERINC5Q86VE9 423 aa25.5■■□□□ 1.67
LYSMD4-208ENST00000493256 MICU3Q86XE3 530 aa25.5■■□□□ 1.67
LYSMD4-208ENST00000493256 FANCBQ8NB91 859 aa25.5■■□□□ 1.67
LYSMD4-208ENST00000493256 PSTPIP2Q9H939 334 aa25.5■■□□□ 1.67
LYSMD4-208ENST00000493256 TELO2Q9Y4R8 837 aa25.5■■□□□ 1.67
LYSMD4-208ENST00000493256 C17orf102A2RUQ5 167 aa25.49■■□□□ 1.67
LYSMD4-208ENST00000493256 DEFB103AP81534 67 aa25.49■■□□□ 1.67
LYSMD4-208ENST00000493256 RNF20Q5VTR2 975 aa25.49■■□□□ 1.67
LYSMD4-208ENST00000493256 TMCO2Q7Z6W1 182 aaPredicted RBP25.49■■□□□ 1.67
LYSMD4-208ENST00000493256 USP26Q9BXU7 913 aa25.49■■□□□ 1.67
LYSMD4-208ENST00000493256 CERS4Q9HA82 394 aa25.49■■□□□ 1.67
LYSMD4-208ENST00000493256 EPOPA6NHQ4 379 aa25.48■■□□□ 1.67
LYSMD4-208ENST00000493256 KIF28PB7ZC32 967 aa25.48■■□□□ 1.67
LYSMD4-208ENST00000493256 TAP1Q03518 808 aa25.48■■□□□ 1.67
LYSMD4-208ENST00000493256 UBE2SQ16763 222 aa25.48■■□□□ 1.67
LYSMD4-208ENST00000493256 NLRX1Q86UT6 975 aa25.48■■□□□ 1.67
LYSMD4-208ENST00000493256 TRIM50Q86XT4 487 aa25.48■■□□□ 1.67
LYSMD4-208ENST00000493256 ATP6V0A1Q93050 837 aa25.48■■□□□ 1.67
LYSMD4-208ENST00000493256 SENP7Q9BQF6 1050 aa25.48■■□□□ 1.67
LYSMD4-208ENST00000493256 PRRC2BQ5JSZ5 2229 aaKnown RBP25.48■■□□□ 1.67
LYSMD4-208ENST00000493256 REV3LO60673 3130 aa25.47■■□□□ 1.67
LYSMD4-208ENST00000493256 RFXAPO00287 272 aa25.47■■□□□ 1.67
LYSMD4-208ENST00000493256 TLL1O43897 1013 aa25.47■■□□□ 1.67
LYSMD4-208ENST00000493256 THPOP40225 353 aa25.47■■□□□ 1.67
LYSMD4-208ENST00000493256 SP4Q02446 784 aa25.47■■□□□ 1.67
LYSMD4-208ENST00000493256 TJAP1Q5JTD0 557 aa25.47■■□□□ 1.67
LYSMD4-208ENST00000493256 APOA5Q6Q788 366 aa25.47■■□□□ 1.67
LYSMD4-208ENST00000493256 TCEANC2Q96MN5 208 aa25.47■■□□□ 1.67
LYSMD4-208ENST00000493256 NEK1Q96PY6 1258 aa25.47■■□□□ 1.67
LYSMD4-208ENST00000493256 RNPEPQ9H4A4 650 aa25.47■■□□□ 1.67
LYSMD4-208ENST00000493256 ABHD14A-ACY1A0A1B0GW23 586 aa25.46■■□□□ 1.67
LYSMD4-208ENST00000493256 TREHO43280 583 aa25.46■■□□□ 1.67
LYSMD4-208ENST00000493256 EXOSC10Q01780 885 aaKnown RBP25.46■■□□□ 1.67
LYSMD4-208ENST00000493256 HEATR3Q7Z4Q2 680 aa25.46■■□□□ 1.67
LYSMD4-208ENST00000493256 RASEFQ8IZ41 740 aa25.46■■□□□ 1.67
LYSMD4-208ENST00000493256 SYMPKQ92797 1274 aaKnown RBP25.46■■□□□ 1.67
LYSMD4-208ENST00000493256 THEGQ9P2T0 379 aa25.46■■□□□ 1.67
LYSMD4-208ENST00000493256 LGR5O75473 907 aa25.45■■□□□ 1.66
LYSMD4-208ENST00000493256 ADCK5Q3MIX3 580 aa25.45■■□□□ 1.66
LYSMD4-208ENST00000493256 UTP14CQ5TAP6 766 aaKnown RBP25.45■■□□□ 1.66
LYSMD4-208ENST00000493256 SYNE3Q6ZMZ3 975 aa25.45■■□□□ 1.66
LYSMD4-208ENST00000493256 SPRED2Q7Z698 418 aa25.45■■□□□ 1.66
LYSMD4-208ENST00000493256 MICALL1Q8N3F8 863 aa25.45■■□□□ 1.66
LYSMD4-208ENST00000493256 ARNTL2Q8WYA1 636 aa25.45■■□□□ 1.66
LYSMD4-208ENST00000493256 GPRASP2Q96D09 838 aa25.45■■□□□ 1.66
LYSMD4-208ENST00000493256 EMSYQ7Z589 1322 aa25.44■■□□□ 1.66
LYSMD4-208ENST00000493256 CNTNAP5Q8WYK1 1306 aa25.44■■□□□ 1.66
LYSMD4-208ENST00000493256 LCHNA4D1U4 455 aa25.44■■□□□ 1.66
LYSMD4-208ENST00000493256 RSPH10B2B2RC85 870 aa25.44■■□□□ 1.66
LYSMD4-208ENST00000493256 EFCAB14O75071 495 aa25.44■■□□□ 1.66
LYSMD4-208ENST00000493256 CDC45O75419 566 aa25.44■■□□□ 1.66
LYSMD4-208ENST00000493256 RSPH10BP0C881 870 aa25.44■■□□□ 1.66
LYSMD4-208ENST00000493256 KCNA2P16389 499 aa25.44■■□□□ 1.66
LYSMD4-208ENST00000493256 ITGB5P18084 799 aa25.44■■□□□ 1.66
LYSMD4-208ENST00000493256 IKBKEQ14164 716 aa25.44■■□□□ 1.66
LYSMD4-208ENST00000493256 TSGA10IPQ3SY00 556 aa25.44■■□□□ 1.66
LYSMD4-208ENST00000493256 DHX32Q7L7V1 743 aaKnown RBP25.44■■□□□ 1.66
LYSMD4-208ENST00000493256 ATXN2LQ8WWM7 1075 aaKnown RBP25.44■■□□□ 1.66
LYSMD4-208ENST00000493256 ZBED2Q9BTP6 218 aa25.44■■□□□ 1.66
LYSMD4-208ENST00000493256 SETD4Q9NVD3 440 aa25.44■■□□□ 1.66
LYSMD4-208ENST00000493256 ZNF215Q9UL58 517 aaPredicted RBP25.44■■□□□ 1.66
LYSMD4-208ENST00000493256 BRPF3Q9ULD4 1205 aa25.44■■□□□ 1.66
LYSMD4-208ENST00000493256 ATP9AO75110 1047 aa25.43■■□□□ 1.66
LYSMD4-208ENST00000493256 WWC2Q6AWC2 1192 aa25.43■■□□□ 1.66
LYSMD4-208ENST00000493256 GIMAP8Q8ND71 665 aaPredicted RBP25.43■■□□□ 1.66
LYSMD4-208ENST00000493256 CDHR1Q96JP9 859 aa25.43■■□□□ 1.66
LYSMD4-208ENST00000493256 RBM28Q9NW13 759 aaKnown RBP25.43■■□□□ 1.66
LYSMD4-208ENST00000493256 PCDHA6Q9UN73 950 aa25.43■■□□□ 1.66
LYSMD4-208ENST00000493256 PCDHA8Q9Y5H6 950 aa25.43■■□□□ 1.66
LYSMD4-208ENST00000493256 UBIAD1Q9Y5Z9 338 aa25.43■■□□□ 1.66
LYSMD4-208ENST00000493256 MTCH2Q9Y6C9 303 aa25.43■■□□□ 1.66
LYSMD4-208ENST00000493256 SPDYE3A6NKU9 549 aa25.42■■□□□ 1.66
LYSMD4-208ENST00000493256 GJB5O95377 273 aa25.42■■□□□ 1.66
LYSMD4-208ENST00000493256 POU3F3P20264 500 aaPredicted RBP25.42■■□□□ 1.66
LYSMD4-208ENST00000493256 DBF4BQ8NFT6 615 aa25.42■■□□□ 1.66
LYSMD4-208ENST00000493256 MICAL3Q7RTP6 2002 aa25.42■■□□□ 1.66
LYSMD4-208ENST00000493256 ZBTB43O43298 467 aa25.41■■□□□ 1.66
LYSMD4-208ENST00000493256 GNAT1P11488 350 aa25.41■■□□□ 1.66
LYSMD4-208ENST00000493256 TCF7P36402 384 aaPredicted RBP25.41■■□□□ 1.66
LYSMD4-208ENST00000493256 ADAM17P78536 824 aa25.41■■□□□ 1.66
LYSMD4-208ENST00000493256 FUT2Q10981 343 aa25.41■■□□□ 1.66
LYSMD4-208ENST00000493256 MKRN4PQ13434 485 aaPredicted RBP25.41■■□□□ 1.66
LYSMD4-208ENST00000493256 RTN1Q16799 776 aa25.41■■□□□ 1.66
LYSMD4-208ENST00000493256 TYW1BQ6NUM6 668 aa25.41■■□□□ 1.66
LYSMD4-208ENST00000493256 ASB2Q96Q27 587 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms