RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 RSPH10BP0C881 870 aa15.26■□□□□ 0.03
HDAC3-213ENST00000492506 LTBRP36941 435 aa15.26■□□□□ 0.03
HDAC3-213ENST00000492506 GHRHRQ02643 423 aa15.26■□□□□ 0.03
HDAC3-213ENST00000492506 GPM6BQ13491 265 aa15.26■□□□□ 0.03
HDAC3-213ENST00000492506 PTPROQ16827 1216 aa15.26■□□□□ 0.03
HDAC3-213ENST00000492506 TIGD5Q53EQ6 642 aa15.26■□□□□ 0.03
HDAC3-213ENST00000492506 ARHGEF16Q5VV41 709 aa15.26■□□□□ 0.03
HDAC3-213ENST00000492506 MCF2L2Q86YR7 1114 aa15.26■□□□□ 0.03
HDAC3-213ENST00000492506 DHX37Q8IY37 1157 aaKnown RBP15.26■□□□□ 0.03
HDAC3-213ENST00000492506 PNMA1Q8ND90 353 aa15.26■□□□□ 0.03
HDAC3-213ENST00000492506 ANKS1AQ92625 1134 aa15.26■□□□□ 0.03
HDAC3-213ENST00000492506 FBXL18Q96ME1 805 aa15.26■□□□□ 0.03
HDAC3-213ENST00000492506 PRKAG3Q9UGI9 489 aa15.26■□□□□ 0.03
HDAC3-213ENST00000492506 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.25■□□□□ 0.03
HDAC3-213ENST00000492506 THPOP40225 353 aa15.25■□□□□ 0.03
HDAC3-213ENST00000492506 HSD17B4P51659 736 aa15.25■□□□□ 0.03
HDAC3-213ENST00000492506 SP2Q02086 613 aa15.25■□□□□ 0.03
HDAC3-213ENST00000492506 AAMPQ13685 434 aa15.25■□□□□ 0.03
HDAC3-213ENST00000492506 CSPP1Q1MSJ5 1256 aa15.25■□□□□ 0.03
HDAC3-213ENST00000492506 CELF3Q5SZQ8 465 aaKnown RBP15.25■□□□□ 0.03
HDAC3-213ENST00000492506 FBXO11Q86XK2 927 aa15.25■□□□□ 0.03
HDAC3-213ENST00000492506 TMEM192Q8IY95 271 aa15.25■□□□□ 0.03
HDAC3-213ENST00000492506 KCNH6Q9H252 994 aa15.25■□□□□ 0.03
HDAC3-213ENST00000492506 JMJD4Q9H9V9 463 aa15.25■□□□□ 0.03
HDAC3-213ENST00000492506 MRPL11Q9Y3B7 192 aaKnown RBP15.25■□□□□ 0.03
HDAC3-213ENST00000492506 PDE1AP54750 535 aa15.24■□□□□ 0.03
HDAC3-213ENST00000492506 NMIQ13287 307 aaPredicted RBP15.24■□□□□ 0.03
HDAC3-213ENST00000492506 CTC1Q2NKJ3 1217 aa15.24■□□□□ 0.03
HDAC3-213ENST00000492506 TICAM2Q86XR7 235 aa15.24■□□□□ 0.03
HDAC3-213ENST00000492506 ADHFE1Q8IWW8 467 aa15.24■□□□□ 0.03
HDAC3-213ENST00000492506 ESR2Q92731 530 aa15.24■□□□□ 0.03
HDAC3-213ENST00000492506 PDCD2LQ9BRP1 358 aa15.24■□□□□ 0.03
HDAC3-213ENST00000492506 NSUN3Q9H649 340 aaKnown RBP15.24■□□□□ 0.03
HDAC3-213ENST00000492506 KIAA1671Q9BY89 1806 aa15.24■□□□□ 0.03
HDAC3-213ENST00000492506 BAZ2BQ9UIF8 2168 aaKnown RBP15.24■□□□□ 0.03
HDAC3-213ENST00000492506 CCDC171Q6TFL3 1326 aa15.23■□□□□ 0.03
HDAC3-213ENST00000492506 TREHO43280 583 aa15.23■□□□□ 0.03
HDAC3-213ENST00000492506 SORBS3O60504 671 aa15.23■□□□□ 0.03
HDAC3-213ENST00000492506 GGPS1O95749 300 aa15.23■□□□□ 0.03
HDAC3-213ENST00000492506 CFBP00751 764 aa15.23■□□□□ 0.03
HDAC3-213ENST00000492506 LINC00271P0C7V0 271 aa15.23■□□□□ 0.03
HDAC3-213ENST00000492506 IRS1P35568 1242 aa15.23■□□□□ 0.03
HDAC3-213ENST00000492506 ASPRV1Q53RT3 343 aa15.23■□□□□ 0.03
HDAC3-213ENST00000492506 STOX1Q6ZVD7 989 aa15.23■□□□□ 0.03
HDAC3-213ENST00000492506 HFE2Q6ZVN8 426 aa15.23■□□□□ 0.03
HDAC3-213ENST00000492506 VSIG10LQ86VR7 867 aa15.23■□□□□ 0.03
HDAC3-213ENST00000492506 SMAP1Q8IYB5 467 aaPredicted RBP15.23■□□□□ 0.03
HDAC3-213ENST00000492506 IL31RAQ8NI17 732 aa15.23■□□□□ 0.03
HDAC3-213ENST00000492506 GPKOWQ92917 476 aaPredicted RBP eCLIP15.23■□□□□ 0.03
HDAC3-213ENST00000492506 SPATA33Q96N06 139 aa15.23■□□□□ 0.03
HDAC3-213ENST00000492506 YME1L1Q96TA2 773 aa15.23■□□□□ 0.03
HDAC3-213ENST00000492506 RNF41Q9H4P4 317 aaPredicted RBP15.23■□□□□ 0.03
HDAC3-213ENST00000492506 BCAS3Q9H6U6 928 aa15.23■□□□□ 0.03
HDAC3-213ENST00000492506 TTC3P53804 2025 aa15.22■□□□□ 0.03
HDAC3-213ENST00000492506 PPP1R11O60927 126 aaPredicted RBP15.22■□□□□ 0.03
HDAC3-213ENST00000492506 UPP2O95045 317 aa15.22■□□□□ 0.03
HDAC3-213ENST00000492506 MYCLP12524 364 aaPredicted RBP15.22■□□□□ 0.03
HDAC3-213ENST00000492506 UBA1P22314 1058 aaKnown RBP15.22■□□□□ 0.03
HDAC3-213ENST00000492506 FGD1P98174 961 aa15.22■□□□□ 0.03
HDAC3-213ENST00000492506 RBM10P98175 930 aaKnown RBP15.22■□□□□ 0.03
HDAC3-213ENST00000492506 DLX2Q07687 328 aaPredicted RBP15.22■□□□□ 0.03
HDAC3-213ENST00000492506 KCNV1Q6PIU1 500 aa15.22■□□□□ 0.03
HDAC3-213ENST00000492506 ENAHQ8N8S7 591 aaPredicted RBP15.22■□□□□ 0.03
HDAC3-213ENST00000492506 SEPT8Q92599 483 aa15.22■□□□□ 0.03
HDAC3-213ENST00000492506 ATP6V0A1Q93050 837 aa15.22■□□□□ 0.03
HDAC3-213ENST00000492506 RNPEPQ9H4A4 650 aa15.22■□□□□ 0.03
HDAC3-213ENST00000492506 VAT1LQ9HCJ6 419 aa15.22■□□□□ 0.03
HDAC3-213ENST00000492506 CLDND1Q9NY35 253 aa15.22■□□□□ 0.03
HDAC3-213ENST00000492506 FAM50BQ9Y247 325 aa15.22■□□□□ 0.03
HDAC3-213ENST00000492506 C17orf102A2RUQ5 167 aa15.21■□□□□ 0.03
HDAC3-213ENST00000492506 C5orf67F2Z3F1 127 aa15.21■□□□□ 0.03
HDAC3-213ENST00000492506 H3BRB1 525 aa15.21■□□□□ 0.03
HDAC3-213ENST00000492506 CAND2O75155 1236 aa15.21■□□□□ 0.03
HDAC3-213ENST00000492506 KDM4AO75164 1064 aa15.21■□□□□ 0.03
HDAC3-213ENST00000492506 SMIM10L2AP0DMW4 78 aa15.21■□□□□ 0.03
HDAC3-213ENST00000492506 SMIM10L2BP0DMW5 78 aa15.21■□□□□ 0.03
HDAC3-213ENST00000492506 TGFB3P10600 412 aa15.21■□□□□ 0.03
HDAC3-213ENST00000492506 PGM5Q15124 567 aa15.21■□□□□ 0.03
HDAC3-213ENST00000492506 SMAD2Q15796 467 aaKnown RBP15.21■□□□□ 0.03
HDAC3-213ENST00000492506 ANKRD45Q5TZF3 282 aa15.21■□□□□ 0.03
HDAC3-213ENST00000492506 RPAINQ86UA6 219 aa15.21■□□□□ 0.03
HDAC3-213ENST00000492506 MTMR8Q96EF0 704 aa15.21■□□□□ 0.03
HDAC3-213ENST00000492506 AMNQ9BXJ7 453 aa15.21■□□□□ 0.03
HDAC3-213ENST00000492506 TUT1Q9H6E5 874 aaKnown RBP15.21■□□□□ 0.03
HDAC3-213ENST00000492506 KAT14Q9H8E8 782 aa15.21■□□□□ 0.03
HDAC3-213ENST00000492506 LOXHD1Q8IVV2 1947 aa15.21■□□□□ 0.02
HDAC3-213ENST00000492506 CFAP54Q96N23 3096 aa15.2■□□□□ 0.02
HDAC3-213ENST00000492506 ESPNB1AK53 854 aa15.2■□□□□ 0.02
HDAC3-213ENST00000492506 LGALS2P05162 132 aa15.2■□□□□ 0.02
HDAC3-213ENST00000492506 CTSHP09668 335 aa15.2■□□□□ 0.02
HDAC3-213ENST00000492506 PARP1P09874 1014 aaKnown RBP15.2■□□□□ 0.02
HDAC3-213ENST00000492506 NT5C2P49902 561 aa15.2■□□□□ 0.02
HDAC3-213ENST00000492506 ADAM17P78536 824 aa15.2■□□□□ 0.02
HDAC3-213ENST00000492506 HYAL1Q12794 435 aa15.2■□□□□ 0.02
HDAC3-213ENST00000492506 CCDC178Q5BJE1 867 aa15.2■□□□□ 0.02
HDAC3-213ENST00000492506 FAM26DQ5JW98 314 aa15.2■□□□□ 0.02
HDAC3-213ENST00000492506 EP400NLQ6ZTU2 488 aa15.2■□□□□ 0.02
HDAC3-213ENST00000492506 IQCA1Q86XH1 822 aa15.2■□□□□ 0.02
HDAC3-213ENST00000492506 STAG2Q8N3U4 1231 aa15.2■□□□□ 0.02
HDAC3-213ENST00000492506 ZFP91Q96JP5 570 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms