RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 SMARCA1P28370 1054 aa17.68■□□□□ 0.42
MRPL55-231ENST00000492170 MCM5P33992 734 aa17.68■□□□□ 0.42
MRPL55-231ENST00000492170 THPOP40225 353 aa17.68■□□□□ 0.42
MRPL55-231ENST00000492170 HIC1Q14526 733 aa17.68■□□□□ 0.42
MRPL55-231ENST00000492170 CYFIP1Q7L576 1253 aa17.68■□□□□ 0.42
MRPL55-231ENST00000492170 TMCO2Q7Z6W1 182 aaPredicted RBP17.68■□□□□ 0.42
MRPL55-231ENST00000492170 TMTC2Q8N394 836 aa17.68■□□□□ 0.42
MRPL55-231ENST00000492170 ATP6V0A1Q93050 837 aa17.68■□□□□ 0.42
MRPL55-231ENST00000492170 TMEM87BQ96K49 555 aa17.68■□□□□ 0.42
MRPL55-231ENST00000492170 UHRF1Q96T88 793 aaPredicted RBP17.68■□□□□ 0.42
MRPL55-231ENST00000492170 RAD9AQ99638 391 aa17.68■□□□□ 0.42
MRPL55-231ENST00000492170 USP26Q9BXU7 913 aa17.68■□□□□ 0.42
MRPL55-231ENST00000492170 XIRP2A4UGR9 3374 aa17.67■□□□□ 0.42
MRPL55-231ENST00000492170 PRRC2BQ5JSZ5 2229 aaKnown RBP17.67■□□□□ 0.42
MRPL55-231ENST00000492170 PTPRSQ13332 1948 aa17.67■□□□□ 0.42
MRPL55-231ENST00000492170 LCHNA4D1U4 455 aa17.67■□□□□ 0.42
MRPL55-231ENST00000492170 CCDC69A6NI79 296 aa17.67■□□□□ 0.42
MRPL55-231ENST00000492170 RSPH10B2B2RC85 870 aa17.67■□□□□ 0.42
MRPL55-231ENST00000492170 SPATA31C2B4DYI2 1134 aa17.67■□□□□ 0.42
MRPL55-231ENST00000492170 PIK3CDO00329 1044 aa17.67■□□□□ 0.42
MRPL55-231ENST00000492170 SH2B2O14492 632 aaPredicted RBP17.67■□□□□ 0.42
MRPL55-231ENST00000492170 RSPH10BP0C881 870 aa17.67■□□□□ 0.42
MRPL55-231ENST00000492170 SMIM10L2AP0DMW4 78 aa17.67■□□□□ 0.42
MRPL55-231ENST00000492170 SMIM10L2BP0DMW5 78 aa17.67■□□□□ 0.42
MRPL55-231ENST00000492170 HOXC8P31273 242 aa17.67■□□□□ 0.42
MRPL55-231ENST00000492170 SEMA3FQ13275 785 aa17.67■□□□□ 0.42
MRPL55-231ENST00000492170 MBTPS1Q14703 1052 aa17.67■□□□□ 0.42
MRPL55-231ENST00000492170 TCTN1Q2MV58 587 aa17.67■□□□□ 0.42
MRPL55-231ENST00000492170 XRRA1Q6P2D8 792 aa17.67■□□□□ 0.42
MRPL55-231ENST00000492170 USP17L6PQ6QN14 398 aa17.67■□□□□ 0.42
MRPL55-231ENST00000492170 RTEL1Q9NZ71 1219 aa17.67■□□□□ 0.42
MRPL55-231ENST00000492170 ZNF215Q9UL58 517 aaPredicted RBP17.67■□□□□ 0.42
MRPL55-231ENST00000492170 PLEKHA8P1O95397 391 aa17.66■□□□□ 0.42
MRPL55-231ENST00000492170 CALM1P0DP23 149 aa17.66■□□□□ 0.42
MRPL55-231ENST00000492170 CALM2P0DP24 149 aa17.66■□□□□ 0.42
MRPL55-231ENST00000492170 CALM3P0DP25 149 aa17.66■□□□□ 0.42
MRPL55-231ENST00000492170 GNAT1P11488 350 aa17.66■□□□□ 0.42
MRPL55-231ENST00000492170 GRB10Q13322 594 aa17.66■□□□□ 0.42
MRPL55-231ENST00000492170 PCNX4Q63HM2 1172 aa17.66■□□□□ 0.42
MRPL55-231ENST00000492170 KRT40Q6A162 431 aa17.66■□□□□ 0.42
MRPL55-231ENST00000492170 CENPQQ7L2Z9 268 aaPredicted RBP17.66■□□□□ 0.42
MRPL55-231ENST00000492170 NLRX1Q86UT6 975 aa17.66■□□□□ 0.42
MRPL55-231ENST00000492170 GPR20Q99678 358 aa17.66■□□□□ 0.42
MRPL55-231ENST00000492170 LSG1Q9H089 658 aaKnown RBP17.66■□□□□ 0.42
MRPL55-231ENST00000492170 BCAS3Q9H6U6 928 aa17.66■□□□□ 0.42
MRPL55-231ENST00000492170 MEIS2O14770 477 aa17.65■□□□□ 0.42
MRPL55-231ENST00000492170 SLC27A2O14975 620 aa17.65■□□□□ 0.42
MRPL55-231ENST00000492170 TREHO43280 583 aa17.65■□□□□ 0.42
MRPL55-231ENST00000492170 CAND2O75155 1236 aa17.65■□□□□ 0.42
MRPL55-231ENST00000492170 AMHP03971 560 aa17.65■□□□□ 0.42
MRPL55-231ENST00000492170 NEFLP07196 543 aa17.65■□□□□ 0.42
MRPL55-231ENST00000492170 LIFRP42702 1097 aa17.65■□□□□ 0.42
MRPL55-231ENST00000492170 TFF2Q03403 129 aa17.65■□□□□ 0.42
MRPL55-231ENST00000492170 SPRED2Q7Z698 418 aa17.65■□□□□ 0.42
MRPL55-231ENST00000492170 SRBD1Q8N5C6 995 aaKnown RBP17.65■□□□□ 0.42
MRPL55-231ENST00000492170 DBF4BQ8NFT6 615 aa17.65■□□□□ 0.42
MRPL55-231ENST00000492170 TGS1Q96RS0 853 aaKnown RBP17.65■□□□□ 0.42
MRPL55-231ENST00000492170 SENP7Q9BQF6 1050 aa17.65■□□□□ 0.42
MRPL55-231ENST00000492170 ESYT1Q9BSJ8 1104 aa17.65■□□□□ 0.42
MRPL55-231ENST00000492170 RNPEPQ9H4A4 650 aa17.65■□□□□ 0.42
MRPL55-231ENST00000492170 COG5Q9UP83 839 aa17.65■□□□□ 0.42
MRPL55-231ENST00000492170 SP4Q02446 784 aa17.64■□□□□ 0.41
MRPL55-231ENST00000492170 UTP14CQ5TAP6 766 aaKnown RBP17.64■□□□□ 0.41
MRPL55-231ENST00000492170 CREB3L3Q68CJ9 461 aa17.64■□□□□ 0.41
MRPL55-231ENST00000492170 FAM117BQ6P1L5 589 aa17.64■□□□□ 0.41
MRPL55-231ENST00000492170 TRIM50Q86XT4 487 aa17.64■□□□□ 0.41
MRPL55-231ENST00000492170 MYOCDQ8IZQ8 938 aa17.64■□□□□ 0.41
MRPL55-231ENST00000492170 GIMAP8Q8ND71 665 aaPredicted RBP17.64■□□□□ 0.41
MRPL55-231ENST00000492170 GDPD5Q8WTR4 605 aa17.64■□□□□ 0.41
MRPL55-231ENST00000492170 COL4A4P53420 1690 aaPredicted RBP17.64■□□□□ 0.41
MRPL55-231ENST00000492170 LINC01553A4QN01 128 aa17.63■□□□□ 0.41
MRPL55-231ENST00000492170 LPXNO60711 386 aa17.63■□□□□ 0.41
MRPL55-231ENST00000492170 RXRAP19793 462 aa17.63■□□□□ 0.41
MRPL55-231ENST00000492170 ERVK-21P61565 698 aa17.63■□□□□ 0.41
MRPL55-231ENST00000492170 PLEKHG4Q58EX7 1191 aa17.63■□□□□ 0.41
MRPL55-231ENST00000492170 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.63■□□□□ 0.41
MRPL55-231ENST00000492170 SEPT8Q92599 483 aa17.63■□□□□ 0.41
MRPL55-231ENST00000492170 GPRASP2Q96D09 838 aa17.63■□□□□ 0.41
MRPL55-231ENST00000492170 CDHR1Q96JP9 859 aa17.63■□□□□ 0.41
MRPL55-231ENST00000492170 PSTPIP2Q9H939 334 aa17.63■□□□□ 0.41
MRPL55-231ENST00000492170 ANO2Q9NQ90 1003 aa17.63■□□□□ 0.41
MRPL55-231ENST00000492170 SETD4Q9NVD3 440 aa17.63■□□□□ 0.41
MRPL55-231ENST00000492170 LMCD1Q9NZU5 365 aa17.63■□□□□ 0.41
MRPL55-231ENST00000492170 MTUS1Q9ULD2 1270 aa17.63■□□□□ 0.41
MRPL55-231ENST00000492170 INSL6Q9Y581 213 aa17.63■□□□□ 0.41
MRPL55-231ENST00000492170 SLC12A7Q9Y666 1083 aa17.63■□□□□ 0.41
MRPL55-231ENST00000492170 CTSHP09668 335 aa17.62■□□□□ 0.41
MRPL55-231ENST00000492170 BMP1P13497 986 aa17.62■□□□□ 0.41
MRPL55-231ENST00000492170 ARHGAP4P98171 946 aa17.62■□□□□ 0.41
MRPL55-231ENST00000492170 CMTR1Q8N1G2 835 aaKnown RBP17.62■□□□□ 0.41
MRPL55-231ENST00000492170 NCOR1O75376 2440 aa17.62■□□□□ 0.41
MRPL55-231ENST00000492170 SPDYE3A6NKU9 549 aa17.61■□□□□ 0.41
MRPL55-231ENST00000492170 KCNQ1P51787 676 aa17.61■□□□□ 0.41
MRPL55-231ENST00000492170 MKRN4PQ13434 485 aaPredicted RBP17.61■□□□□ 0.41
MRPL55-231ENST00000492170 NECTIN1Q15223 517 aa17.61■□□□□ 0.41
MRPL55-231ENST00000492170 ERICH6BQ5W0A0 696 aa17.61■□□□□ 0.41
MRPL55-231ENST00000492170 TMTC3Q6ZXV5 915 aa17.61■□□□□ 0.41
MRPL55-231ENST00000492170 MICU3Q86XE3 530 aa17.61■□□□□ 0.41
MRPL55-231ENST00000492170 RAB11FIP4Q86YS3 637 aa17.61■□□□□ 0.41
MRPL55-231ENST00000492170 LMBR1Q8WVP7 490 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms