RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 ZBED2Q9BTP6 218 aa21.16■□□□□ 0.98
SMIM4-205ENST00000491607 USP26Q9BXU7 913 aa21.16■□□□□ 0.98
SMIM4-205ENST00000491607 PSTPIP2Q9H939 334 aa21.16■□□□□ 0.98
SMIM4-205ENST00000491607 CXCL10P02778 98 aa21.15■□□□□ 0.98
SMIM4-205ENST00000491607 THPOP40225 353 aa21.15■□□□□ 0.98
SMIM4-205ENST00000491607 TRIM71Q2Q1W2 868 aaKnown RBP21.15■□□□□ 0.98
SMIM4-205ENST00000491607 TJAP1Q5JTD0 557 aa21.15■□□□□ 0.98
SMIM4-205ENST00000491607 XRRA1Q6P2D8 792 aa21.15■□□□□ 0.98
SMIM4-205ENST00000491607 SYNE3Q6ZMZ3 975 aa21.15■□□□□ 0.98
SMIM4-205ENST00000491607 TMCO2Q7Z6W1 182 aaPredicted RBP21.15■□□□□ 0.98
SMIM4-205ENST00000491607 NLRX1Q86UT6 975 aa21.15■□□□□ 0.98
SMIM4-205ENST00000491607 FANCBQ8NB91 859 aa21.15■□□□□ 0.98
SMIM4-205ENST00000491607 ATP6V0A1Q93050 837 aa21.15■□□□□ 0.98
SMIM4-205ENST00000491607 THEGQ9P2T0 379 aa21.15■□□□□ 0.98
SMIM4-205ENST00000491607 RFXAPO00287 272 aa21.14■□□□□ 0.97
SMIM4-205ENST00000491607 SMIM10L2AP0DMW4 78 aa21.14■□□□□ 0.97
SMIM4-205ENST00000491607 SMIM10L2BP0DMW5 78 aa21.14■□□□□ 0.97
SMIM4-205ENST00000491607 DEFB103AP81534 67 aa21.14■□□□□ 0.97
SMIM4-205ENST00000491607 UTP14CQ5TAP6 766 aaKnown RBP21.14■□□□□ 0.97
SMIM4-205ENST00000491607 TRAF7Q6Q0C0 670 aa21.14■□□□□ 0.97
SMIM4-205ENST00000491607 TMTC3Q6ZXV5 915 aa21.14■□□□□ 0.97
SMIM4-205ENST00000491607 HEATR3Q7Z4Q2 680 aa21.14■□□□□ 0.97
SMIM4-205ENST00000491607 SERINC5Q86VE9 423 aa21.14■□□□□ 0.97
SMIM4-205ENST00000491607 ARNTL2Q8WYA1 636 aa21.14■□□□□ 0.97
SMIM4-205ENST00000491607 GPR20Q99678 358 aa21.14■□□□□ 0.97
SMIM4-205ENST00000491607 ABHD14A-ACY1A0A1B0GW23 586 aa21.13■□□□□ 0.97
SMIM4-205ENST00000491607 SPDYE3A6NKU9 549 aa21.13■□□□□ 0.97
SMIM4-205ENST00000491607 RBAK-RBAKDNI3L0D1 243 aa21.13■□□□□ 0.97
SMIM4-205ENST00000491607 TAP1Q03518 808 aa21.13■□□□□ 0.97
SMIM4-205ENST00000491607 IKBKEQ14164 716 aa21.13■□□□□ 0.97
SMIM4-205ENST00000491607 UBE2SQ16763 222 aa21.13■□□□□ 0.97
SMIM4-205ENST00000491607 TCTN1Q2MV58 587 aa21.13■□□□□ 0.97
SMIM4-205ENST00000491607 SGMS1Q86VZ5 419 aa21.13■□□□□ 0.97
SMIM4-205ENST00000491607 TRIM50Q86XT4 487 aa21.13■□□□□ 0.97
SMIM4-205ENST00000491607 NEK1Q96PY6 1258 aa21.13■□□□□ 0.97
SMIM4-205ENST00000491607 RNPEPQ9H4A4 650 aa21.13■□□□□ 0.97
SMIM4-205ENST00000491607 ZNF215Q9UL58 517 aaPredicted RBP21.13■□□□□ 0.97
SMIM4-205ENST00000491607 TELO2Q9Y4R8 837 aa21.13■□□□□ 0.97
SMIM4-205ENST00000491607 TRIP12Q14669 1992 aaPredicted RBP21.13■□□□□ 0.97
SMIM4-205ENST00000491607 EMSYQ7Z589 1322 aa21.12■□□□□ 0.97
SMIM4-205ENST00000491607 RSPH10B2B2RC85 870 aa21.12■□□□□ 0.97
SMIM4-205ENST00000491607 TREHO43280 583 aa21.12■□□□□ 0.97
SMIM4-205ENST00000491607 GTPBP6O43824 516 aaPredicted RBP21.12■□□□□ 0.97
SMIM4-205ENST00000491607 ARHGEF15O94989 841 aa21.12■□□□□ 0.97
SMIM4-205ENST00000491607 RSPH10BP0C881 870 aa21.12■□□□□ 0.97
SMIM4-205ENST00000491607 MBTPS1Q14703 1052 aa21.12■□□□□ 0.97
SMIM4-205ENST00000491607 GIMAP8Q8ND71 665 aaPredicted RBP21.12■□□□□ 0.97
SMIM4-205ENST00000491607 ATXN2LQ8WWM7 1075 aaKnown RBP21.12■□□□□ 0.97
SMIM4-205ENST00000491607 TCEANC2Q96MN5 208 aa21.12■□□□□ 0.97
SMIM4-205ENST00000491607 SENP7Q9BQF6 1050 aa21.12■□□□□ 0.97
SMIM4-205ENST00000491607 TSPYL2Q9H2G4 693 aaPredicted RBP21.12■□□□□ 0.97
SMIM4-205ENST00000491607 SETD4Q9NVD3 440 aa21.12■□□□□ 0.97
SMIM4-205ENST00000491607 SPTBN5Q9NRC6 3674 aaKnown RBP21.12■□□□□ 0.97
SMIM4-205ENST00000491607 LCHNA4D1U4 455 aa21.11■□□□□ 0.97
SMIM4-205ENST00000491607 EFCAB14O75071 495 aa21.11■□□□□ 0.97
SMIM4-205ENST00000491607 LGR5O75473 907 aa21.11■□□□□ 0.97
SMIM4-205ENST00000491607 GNAT1P11488 350 aa21.11■□□□□ 0.97
SMIM4-205ENST00000491607 GPRASP2Q96D09 838 aa21.11■□□□□ 0.97
SMIM4-205ENST00000491607 PKD2L1Q9P0L9 805 aa21.11■□□□□ 0.97
SMIM4-205ENST00000491607 TET1Q8NFU7 2136 aa21.1■□□□□ 0.97
SMIM4-205ENST00000491607 EPOPA6NHQ4 379 aa21.1■□□□□ 0.97
SMIM4-205ENST00000491607 CDC45O75419 566 aa21.1■□□□□ 0.97
SMIM4-205ENST00000491607 CTSHP09668 335 aa21.1■□□□□ 0.97
SMIM4-205ENST00000491607 HOXC8P31273 242 aa21.1■□□□□ 0.97
SMIM4-205ENST00000491607 SKIV2LQ15477 1246 aaKnown RBP21.1■□□□□ 0.97
SMIM4-205ENST00000491607 FAM117BQ6P1L5 589 aa21.1■□□□□ 0.97
SMIM4-205ENST00000491607 APOA5Q6Q788 366 aa21.1■□□□□ 0.97
SMIM4-205ENST00000491607 CDHR1Q96JP9 859 aa21.1■□□□□ 0.97
SMIM4-205ENST00000491607 RBM28Q9NW13 759 aaKnown RBP21.1■□□□□ 0.97
SMIM4-205ENST00000491607 PCDHA6Q9UN73 950 aa21.1■□□□□ 0.97
SMIM4-205ENST00000491607 PCDHA8Q9Y5H6 950 aa21.1■□□□□ 0.97
SMIM4-205ENST00000491607 CHD7Q9P2D1 2997 aa21.1■□□□□ 0.97
SMIM4-205ENST00000491607 ATP9AO75110 1047 aa21.09■□□□□ 0.97
SMIM4-205ENST00000491607 GJB5O95377 273 aa21.09■□□□□ 0.97
SMIM4-205ENST00000491607 ITGB5P18084 799 aa21.09■□□□□ 0.97
SMIM4-205ENST00000491607 TCF7P36402 384 aaPredicted RBP21.09■□□□□ 0.97
SMIM4-205ENST00000491607 MRPS5P82675 430 aaKnown RBP21.09■□□□□ 0.97
SMIM4-205ENST00000491607 ARHGAP4P98171 946 aa21.09■□□□□ 0.97
SMIM4-205ENST00000491607 MTMR1Q13613 665 aa21.09■□□□□ 0.97
SMIM4-205ENST00000491607 DHX32Q7L7V1 743 aaKnown RBP21.09■□□□□ 0.97
SMIM4-205ENST00000491607 SPRED2Q7Z698 418 aa21.09■□□□□ 0.97
SMIM4-205ENST00000491607 DBF4BQ8NFT6 615 aa21.09■□□□□ 0.97
SMIM4-205ENST00000491607 ASB2Q96Q27 587 aa21.09■□□□□ 0.97
SMIM4-205ENST00000491607 MTCH2Q9Y6C9 303 aa21.09■□□□□ 0.97
SMIM4-205ENST00000491607 CUL9Q8IWT3 2517 aa21.09■□□□□ 0.97
SMIM4-205ENST00000491607 CNTNAP5Q8WYK1 1306 aa21.08■□□□□ 0.97
SMIM4-205ENST00000491607 ZBTB43O43298 467 aa21.08■□□□□ 0.97
SMIM4-205ENST00000491607 KCNA2P16389 499 aa21.08■□□□□ 0.97
SMIM4-205ENST00000491607 NAPAP54920 295 aa21.08■□□□□ 0.97
SMIM4-205ENST00000491607 RTN1Q16799 776 aa21.08■□□□□ 0.97
SMIM4-205ENST00000491607 ADCK5Q3MIX3 580 aa21.08■□□□□ 0.97
SMIM4-205ENST00000491607 KRT40Q6A162 431 aa21.08■□□□□ 0.97
SMIM4-205ENST00000491607 WWC2Q6AWC2 1192 aa21.08■□□□□ 0.97
SMIM4-205ENST00000491607 RASEFQ8IZ41 740 aa21.08■□□□□ 0.97
SMIM4-205ENST00000491607 IL27Q8NEV9 243 aa21.08■□□□□ 0.97
SMIM4-205ENST00000491607 RAD9AQ99638 391 aa21.08■□□□□ 0.97
SMIM4-205ENST00000491607 EHMT1Q9H9B1 1298 aa21.08■□□□□ 0.97
SMIM4-205ENST00000491607 BRPF3Q9ULD4 1205 aa21.08■□□□□ 0.97
SMIM4-205ENST00000491607 PTPRSQ13332 1948 aa21.08■□□□□ 0.96
SMIM4-205ENST00000491607 DOCK5Q9H7D0 1870 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms