RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 H3BRB1 525 aa9.8□□□□□ -0.84
APOBEC3F-204ENST00000491387 DHX16O60231 1041 aaKnown RBP9.8□□□□□ -0.84
APOBEC3F-204ENST00000491387 AMHP03971 560 aa9.8□□□□□ -0.84
APOBEC3F-204ENST00000491387 ADAM17P78536 824 aa9.8□□□□□ -0.84
APOBEC3F-204ENST00000491387 PTH1RQ03431 593 aa9.8□□□□□ -0.84
APOBEC3F-204ENST00000491387 GRM4Q14833 912 aa9.8□□□□□ -0.84
APOBEC3F-204ENST00000491387 TTC22Q5TAA0 569 aa9.8□□□□□ -0.84
APOBEC3F-204ENST00000491387 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.8□□□□□ -0.84
APOBEC3F-204ENST00000491387 RPAINQ86UA6 219 aa9.8□□□□□ -0.84
APOBEC3F-204ENST00000491387 FAM178BQ8IXR5 827 aa9.8□□□□□ -0.84
APOBEC3F-204ENST00000491387 DBF4BQ8NFT6 615 aa9.8□□□□□ -0.84
APOBEC3F-204ENST00000491387 IL31RAQ8NI17 732 aa9.8□□□□□ -0.84
APOBEC3F-204ENST00000491387 KHSRPQ92945 711 aaKnown RBP eCLIP9.8□□□□□ -0.84
APOBEC3F-204ENST00000491387 TOP1MTQ969P6 601 aa9.8□□□□□ -0.84
APOBEC3F-204ENST00000491387 USP26Q9BXU7 913 aa9.8□□□□□ -0.84
APOBEC3F-204ENST00000491387 TUT1Q9H6E5 874 aaKnown RBP9.8□□□□□ -0.84
APOBEC3F-204ENST00000491387 CD320Q9NPF0 282 aa9.8□□□□□ -0.84
APOBEC3F-204ENST00000491387 KAT6AQ92794 2004 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 PNMA6FA0A0J9YX94 578 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 C17orf102A2RUQ5 167 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 SPATA31C2B4DYI2 1134 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 GCOM1H8Y6P7 765 aaPredicted RBP9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 CYTH3O43739 400 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 LGALS2P05162 132 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 POLR2MP0CAP2 368 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 SMIM10L2AP0DMW4 78 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 SMIM10L2BP0DMW5 78 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 MYCLP12524 364 aaPredicted RBP9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 CCND2P30279 289 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 HOXA13P31271 388 aaPredicted RBP9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 THPOP40225 353 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 TROAPQ12815 778 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 PTPROQ16827 1216 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 PUS10Q3MIT2 529 aaKnown RBP9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 FAM26DQ5JW98 314 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 XRRA1Q6P2D8 792 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 METTL7BQ6UX53 244 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 CYB5R4Q7L1T6 521 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 FBXO22Q8NEZ5 403 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 NEK9Q8TD19 979 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 ATP6V0A1Q93050 837 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 MRPL38Q96DV4 380 aaKnown RBP9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 SENP7Q9BQF6 1050 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 RNPEPQ9H4A4 650 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 MLXIPQ9HAP2 919 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 SENP2Q9HC62 589 aa9.79□□□□□ -0.84
APOBEC3F-204ENST00000491387 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.78□□□□□ -0.84
APOBEC3F-204ENST00000491387 H3BNC9 293 aa9.78□□□□□ -0.84
APOBEC3F-204ENST00000491387 GNAT1P11488 350 aa9.78□□□□□ -0.84
APOBEC3F-204ENST00000491387 SMARCA1P28370 1054 aa9.78□□□□□ -0.84
APOBEC3F-204ENST00000491387 MRPS9P82933 396 aaKnown RBP9.78□□□□□ -0.84
APOBEC3F-204ENST00000491387 SEMA3FQ13275 785 aa9.78□□□□□ -0.84
APOBEC3F-204ENST00000491387 NEDD9Q14511 834 aa9.78□□□□□ -0.84
APOBEC3F-204ENST00000491387 GNPTABQ3T906 1256 aa9.78□□□□□ -0.84
APOBEC3F-204ENST00000491387 EPC2Q52LR7 807 aa9.78□□□□□ -0.84
APOBEC3F-204ENST00000491387 TIGD5Q53EQ6 642 aa9.78□□□□□ -0.84
APOBEC3F-204ENST00000491387 GJD3Q8N144 294 aa9.78□□□□□ -0.84
APOBEC3F-204ENST00000491387 SEPT8Q92599 483 aa9.78□□□□□ -0.84
APOBEC3F-204ENST00000491387 APBB2Q92870 758 aa9.78□□□□□ -0.84
APOBEC3F-204ENST00000491387 GPKOWQ92917 476 aaPredicted RBP eCLIP9.78□□□□□ -0.84
APOBEC3F-204ENST00000491387 PIGSQ96S52 555 aa9.78□□□□□ -0.84
APOBEC3F-204ENST00000491387 MAP3K14Q99558 947 aa9.78□□□□□ -0.84
APOBEC3F-204ENST00000491387 C17orf80Q9BSJ5 609 aa9.78□□□□□ -0.84
APOBEC3F-204ENST00000491387 HCN4Q9Y3Q4 1203 aa9.78□□□□□ -0.84
APOBEC3F-204ENST00000491387 ATG2AQ2TAZ0 1938 aa9.78□□□□□ -0.84
APOBEC3F-204ENST00000491387 GRXCR2A6NFK2 248 aa9.77□□□□□ -0.85
APOBEC3F-204ENST00000491387 PRR33A8MZF0 331 aa9.77□□□□□ -0.85
APOBEC3F-204ENST00000491387 C5orf67F2Z3F1 127 aa9.77□□□□□ -0.85
APOBEC3F-204ENST00000491387 PIK3CDO00329 1044 aa9.77□□□□□ -0.85
APOBEC3F-204ENST00000491387 TREHO43280 583 aa9.77□□□□□ -0.85
APOBEC3F-204ENST00000491387 FIBPO43427 364 aa9.77□□□□□ -0.85
APOBEC3F-204ENST00000491387 TRDNQ13061 729 aa9.77□□□□□ -0.85
APOBEC3F-204ENST00000491387 MYOCDQ8IZQ8 938 aa9.77□□□□□ -0.85
APOBEC3F-204ENST00000491387 GPR20Q99678 358 aa9.77□□□□□ -0.85
APOBEC3F-204ENST00000491387 BCAS3Q9H6U6 928 aa9.77□□□□□ -0.85
APOBEC3F-204ENST00000491387 MTUS1Q9ULD2 1270 aa9.77□□□□□ -0.85
APOBEC3F-204ENST00000491387 U3KPZ7 1027 aaPredicted RBP9.77□□□□□ -0.85
APOBEC3F-204ENST00000491387 TTC3P53804 2025 aa9.77□□□□□ -0.85
APOBEC3F-204ENST00000491387 RALGAPA2Q2PPJ7 1873 aa9.76□□□□□ -0.85
APOBEC3F-204ENST00000491387 POTEB3A0JP26 581 aa9.76□□□□□ -0.85
APOBEC3F-204ENST00000491387 NOP56O00567 594 aaKnown RBP9.76□□□□□ -0.85
APOBEC3F-204ENST00000491387 IFIT3O14879 490 aaKnown RBP9.76□□□□□ -0.85
APOBEC3F-204ENST00000491387 NCK2O43639 380 aa9.76□□□□□ -0.85
APOBEC3F-204ENST00000491387 RB1P06400 928 aa9.76□□□□□ -0.85
APOBEC3F-204ENST00000491387 CYP21A2P08686 494 aa9.76□□□□□ -0.85
APOBEC3F-204ENST00000491387 LINC00271P0C7V0 271 aa9.76□□□□□ -0.85
APOBEC3F-204ENST00000491387 ALADP13716 330 aa9.76□□□□□ -0.85
APOBEC3F-204ENST00000491387 KCNA5P22460 613 aa9.76□□□□□ -0.85
APOBEC3F-204ENST00000491387 CHMLP26374 656 aa9.76□□□□□ -0.85
APOBEC3F-204ENST00000491387 PCNX4Q63HM2 1172 aa9.76□□□□□ -0.85
APOBEC3F-204ENST00000491387 PTCRAQ6ISU1 281 aaPredicted RBP9.76□□□□□ -0.85
APOBEC3F-204ENST00000491387 FAM117BQ6P1L5 589 aa9.76□□□□□ -0.85
APOBEC3F-204ENST00000491387 POTEBQ6S5H4 581 aa9.76□□□□□ -0.85
APOBEC3F-204ENST00000491387 FCHSD1Q86WN1 690 aa9.76□□□□□ -0.85
APOBEC3F-204ENST00000491387 TMEM192Q8IY95 271 aa9.76□□□□□ -0.85
APOBEC3F-204ENST00000491387 GIMAP8Q8ND71 665 aaPredicted RBP9.76□□□□□ -0.85
APOBEC3F-204ENST00000491387 BANK1Q8NDB2 785 aa9.76□□□□□ -0.85
APOBEC3F-204ENST00000491387 PABPC5Q96DU9 382 aaKnown RBP9.76□□□□□ -0.85
APOBEC3F-204ENST00000491387 YME1L1Q96TA2 773 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms