RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 G3V3G9 751 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 PDE2AO00408 941 aaPredicted RBP12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 MAPK13O15264 365 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 GNAT1P11488 350 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 CFAP157Q5JU67 520 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 DCAF8Q5TAQ9 597 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 ALKBH5Q6P6C2 394 aaKnown RBP12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 KSR1Q8IVT5 923 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 MDM1Q8TC05 714 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 DTNBP1Q96EV8 351 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.28□□□□□ -0.444e-9■■■■□ 25.9
CRNKL1-204ENST00000490910 SLITRK6Q9H5Y7 841 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 ARMCX3Q9UH62 379 aaPredicted RBP12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 FAM170AA1A519 330 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 NQO1P15559 274 aaKnown RBP12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 MRPL12P52815 198 aaKnown RBP12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 PPP1R21Q6ZMI0 780 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 HS2ST1Q7LGA3 356 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 DDX42Q86XP3 938 aaKnown RBP eCLIP12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 PDCD7Q8N8D1 485 aaKnown RBP12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 PRMT1Q99873 361 aaKnown RBP12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 MOV10L1Q9BXT6 1211 aaKnown RBP12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 FRMPD1Q5SYB0 1578 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 PDS5AQ29RF7 1337 aaKnown RBP12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 AP1G2O75843 785 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 ABL1P00519 1130 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 A1BGP04217 495 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 GLI1P08151 1106 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 XRCC5P13010 732 aaKnown RBP12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 SEPT6Q14141 434 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 LRRC14Q15048 493 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 TMEM154Q6P9G4 183 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 TMC4Q7Z404 712 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 LONP2Q86WA8 852 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 ANKRD35Q8N283 1001 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 GPKOWQ92917 476 aaPredicted RBP eCLIP12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 RIC8AQ9NPQ8 531 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 ARL2BPQ9Y2Y0 163 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 COL4A3BPQ9Y5P4 624 aa12.28□□□□□ -0.44
CRNKL1-204ENST00000490910 MAP3K15Q6ZN16 1313 aa12.27□□□□□ -0.44
CRNKL1-204ENST00000490910 PLCG1P19174 1290 aa12.27□□□□□ -0.44
CRNKL1-204ENST00000490910 CALCRLQ16602 461 aa12.27□□□□□ -0.44
CRNKL1-204ENST00000490910 FAM26FQ5R3K3 315 aa12.27□□□□□ -0.44
CRNKL1-204ENST00000490910 CYB5RLQ6IPT4 315 aa12.27□□□□□ -0.44
CRNKL1-204ENST00000490910 RASGRP4Q8TDF6 673 aa12.27□□□□□ -0.44
CRNKL1-204ENST00000490910 AK8Q96MA6 479 aa12.27□□□□□ -0.44
CRNKL1-204ENST00000490910 MLXIPLQ9NP71 852 aa12.27□□□□□ -0.44
CRNKL1-204ENST00000490910 MCM9Q9NXL9 1143 aa12.27□□□□□ -0.44
CRNKL1-204ENST00000490910 LEMD3Q9Y2U8 911 aa12.27□□□□□ -0.44
CRNKL1-204ENST00000490910 DDAH1O94760 285 aa12.27□□□□□ -0.45
CRNKL1-204ENST00000490910 LAMB3Q13751 1172 aa12.27□□□□□ -0.45
CRNKL1-204ENST00000490910 SAMD1Q6SPF0 538 aaPredicted RBP12.27□□□□□ -0.45
CRNKL1-204ENST00000490910 CENPKQ9BS16 269 aa12.27□□□□□ -0.45
CRNKL1-204ENST00000490910 NOC2LQ9Y3T9 749 aaKnown RBP12.27□□□□□ -0.45
CRNKL1-204ENST00000490910 WDR17Q8IZU2 1322 aa12.27□□□□□ -0.45
CRNKL1-204ENST00000490910 FAM205CA6NFA0 338 aa12.27□□□□□ -0.45
CRNKL1-204ENST00000490910 LAD1O00515 517 aa12.27□□□□□ -0.45
CRNKL1-204ENST00000490910 GJC1P36383 396 aa12.27□□□□□ -0.45
CRNKL1-204ENST00000490910 ATP2C1P98194 919 aaPredicted RBP12.27□□□□□ -0.45
CRNKL1-204ENST00000490910 NBPF20Q3BBV1 942 aa12.27□□□□□ -0.45
CRNKL1-204ENST00000490910 FAM47EQ6ZV65 393 aa12.27□□□□□ -0.45
CRNKL1-204ENST00000490910 RNF217Q8TC41 542 aa12.27□□□□□ -0.45
CRNKL1-204ENST00000490910 SPZ1Q9BXG8 430 aa12.27□□□□□ -0.45
CRNKL1-204ENST00000490910 CEP72Q9P209 647 aa12.27□□□□□ -0.45
CRNKL1-204ENST00000490910 ANKARQ7Z5J8 1434 aa12.27□□□□□ -0.45
CRNKL1-204ENST00000490910 DESP17661 470 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 VPS41P49754 854 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 ELF3P78545 371 aaPredicted RBP12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 PLCB3Q01970 1234 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 LRRC63Q05C16 580 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 PROSER2Q86WR7 435 aaPredicted RBP12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 NBPF5PQ86XG9 351 aaPredicted RBP12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 CREG2Q8IUH2 290 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 RAB3IL1Q8TBN0 382 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 SDR42E1Q8WUS8 393 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 ABTB1Q969K4 478 aaPredicted RBP12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 PPP1R9AQ9ULJ8 1098 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 PTPN22Q9Y2R2 807 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 FAM237AA0A1B0GTK4 181 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 SRRM3A6NNA2 597 aaPredicted RBP12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 TCP11X1B4DZS4 312 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 PPFIA2O75334 1257 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 DCTN3O75935 186 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 DNAJC8O75937 253 aaPredicted RBP12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 HSPA6P17066 643 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 PHKA1P46020 1223 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 COG7P83436 770 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 RNASELQ05823 741 aaKnown RBP12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 ADAM9Q13443 819 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 LRRC41Q15345 812 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 EXOC3L4Q17RC7 722 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 SPATA21Q7Z572 469 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 ARHGAP18Q8N392 663 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 NAF1Q96HR8 494 aaKnown RBP12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 DLGAP2Q9P1A6 1054 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 SSU72P8A0A1W2PR75 194 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 CALUO43852 315 aaPredicted RBP12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 FAM153BP0C7A2 387 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 ITIH4Q14624 930 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 FAM153CQ494X1 144 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms