RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 SKIV2LQ15477 1246 aaKnown RBP18.03■□□□□ 0.48
COL2A1-207ENST00000490609 MB21D2Q8IYB1 491 aaPredicted RBP18.03■□□□□ 0.48
COL2A1-207ENST00000490609 INPP4AQ96PE3 977 aaPredicted RBP18.03■□□□□ 0.48
COL2A1-207ENST00000490609 CD320Q9NPF0 282 aa18.03■□□□□ 0.48
COL2A1-207ENST00000490609 COG5Q9UP83 839 aa18.03■□□□□ 0.48
COL2A1-207ENST00000490609 H3BRB1 525 aa18.02■□□□□ 0.48
COL2A1-207ENST00000490609 SGSM2O43147 1006 aa18.02■□□□□ 0.48
COL2A1-207ENST00000490609 LGALS2P05162 132 aa18.02■□□□□ 0.48
COL2A1-207ENST00000490609 SMIM10L2AP0DMW4 78 aa18.02■□□□□ 0.48
COL2A1-207ENST00000490609 SMIM10L2BP0DMW5 78 aa18.02■□□□□ 0.48
COL2A1-207ENST00000490609 CCND2P30279 289 aa18.02■□□□□ 0.48
COL2A1-207ENST00000490609 IKBKEQ14164 716 aa18.02■□□□□ 0.48
COL2A1-207ENST00000490609 PLEKHG4Q58EX7 1191 aa18.02■□□□□ 0.48
COL2A1-207ENST00000490609 FAM117BQ6P1L5 589 aa18.02■□□□□ 0.48
COL2A1-207ENST00000490609 HLA-CQ95604 372 aa18.02■□□□□ 0.48
COL2A1-207ENST00000490609 EPHX3Q9H6B9 360 aa18.02■□□□□ 0.48
COL2A1-207ENST00000490609 TUT1Q9H6E5 874 aaKnown RBP18.02■□□□□ 0.48
COL2A1-207ENST00000490609 LMCD1Q9NZU5 365 aa18.02■□□□□ 0.48
COL2A1-207ENST00000490609 MTUS1Q9ULD2 1270 aa18.02■□□□□ 0.48
COL2A1-207ENST00000490609 RALGAPA2Q2PPJ7 1873 aa18.01■□□□□ 0.47
COL2A1-207ENST00000490609 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.01■□□□□ 0.47
COL2A1-207ENST00000490609 RSPH10B2B2RC85 870 aa18.01■□□□□ 0.47
COL2A1-207ENST00000490609 MEIS2O14770 477 aa18.01■□□□□ 0.47
COL2A1-207ENST00000490609 RSPH10BP0C881 870 aa18.01■□□□□ 0.47
COL2A1-207ENST00000490609 THPOP40225 353 aa18.01■□□□□ 0.47
COL2A1-207ENST00000490609 SP7Q8TDD2 431 aaPredicted RBP18.01■□□□□ 0.47
COL2A1-207ENST00000490609 MAP4K1Q92918 833 aa18.01■□□□□ 0.47
COL2A1-207ENST00000490609 GPR20Q99678 358 aa18.01■□□□□ 0.47
COL2A1-207ENST00000490609 C17orf80Q9BSJ5 609 aa18.01■□□□□ 0.47
COL2A1-207ENST00000490609 ZBED2Q9BTP6 218 aa18.01■□□□□ 0.47
COL2A1-207ENST00000490609 RTEL1Q9NZ71 1219 aa18.01■□□□□ 0.47
COL2A1-207ENST00000490609 SUPT16HQ9Y5B9 1047 aaKnown RBP18.01■□□□□ 0.47
COL2A1-207ENST00000490609 U3KPZ7 1027 aaPredicted RBP18.01■□□□□ 0.47
COL2A1-207ENST00000490609 TTC3P53804 2025 aa18■□□□□ 0.47
COL2A1-207ENST00000490609 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18■□□□□ 0.47
COL2A1-207ENST00000490609 WTAPQ15007 396 aa18■□□□□ 0.47
COL2A1-207ENST00000490609 AAK1Q2M2I8 961 aa18■□□□□ 0.47
COL2A1-207ENST00000490609 USP17L6PQ6QN14 398 aa18■□□□□ 0.47
COL2A1-207ENST00000490609 CYFIP1Q7L576 1253 aa18■□□□□ 0.47
COL2A1-207ENST00000490609 TRIM50Q86XT4 487 aa18■□□□□ 0.47
COL2A1-207ENST00000490609 PIBF1Q8WXW3 757 aa18■□□□□ 0.47
COL2A1-207ENST00000490609 ATP6V0A1Q93050 837 aa18■□□□□ 0.47
COL2A1-207ENST00000490609 TGS1Q96RS0 853 aaKnown RBP18■□□□□ 0.47
COL2A1-207ENST00000490609 MYL10Q9BUA6 226 aa18■□□□□ 0.47
COL2A1-207ENST00000490609 MLXIPQ9HAP2 919 aa18■□□□□ 0.47
COL2A1-207ENST00000490609 LY9Q9HBG7 655 aa18■□□□□ 0.47
COL2A1-207ENST00000490609 C17orf102A2RUQ5 167 aa17.99■□□□□ 0.47
COL2A1-207ENST00000490609 METTL7BQ6UX53 244 aa17.99■□□□□ 0.47
COL2A1-207ENST00000490609 NCOA7Q8NI08 942 aa17.99■□□□□ 0.47
COL2A1-207ENST00000490609 C11orf16Q9NQ32 467 aa17.99■□□□□ 0.47
COL2A1-207ENST00000490609 SETD4Q9NVD3 440 aa17.99■□□□□ 0.47
COL2A1-207ENST00000490609 COL4A6Q14031 1691 aa17.99■□□□□ 0.47
COL2A1-207ENST00000490609 EFCAB14O75071 495 aa17.98■□□□□ 0.47
COL2A1-207ENST00000490609 ATP9AO75110 1047 aa17.98■□□□□ 0.47
COL2A1-207ENST00000490609 TRDNQ13061 729 aa17.98■□□□□ 0.47
COL2A1-207ENST00000490609 SRBD1Q8N5C6 995 aaKnown RBP17.98■□□□□ 0.47
COL2A1-207ENST00000490609 IL27Q8NEV9 243 aa17.98■□□□□ 0.47
COL2A1-207ENST00000490609 TOP1MTQ969P6 601 aa17.98■□□□□ 0.47
COL2A1-207ENST00000490609 SPZ1Q9BXG8 430 aa17.98■□□□□ 0.47
COL2A1-207ENST00000490609 INSL6Q9Y581 213 aa17.98■□□□□ 0.47
COL2A1-207ENST00000490609 EMSYQ7Z589 1322 aa17.98■□□□□ 0.47
COL2A1-207ENST00000490609 PIK3CDO00329 1044 aa17.97■□□□□ 0.47
COL2A1-207ENST00000490609 PLEKHA8P1O95397 391 aa17.97■□□□□ 0.47
COL2A1-207ENST00000490609 LINC00271P0C7V0 271 aa17.97■□□□□ 0.47
COL2A1-207ENST00000490609 FAM26DQ5JW98 314 aa17.97■□□□□ 0.47
COL2A1-207ENST00000490609 CMTR1Q8N1G2 835 aaKnown RBP17.97■□□□□ 0.47
COL2A1-207ENST00000490609 MAP3K14Q99558 947 aa17.97■□□□□ 0.47
COL2A1-207ENST00000490609 USP26Q9BXU7 913 aa17.97■□□□□ 0.47
COL2A1-207ENST00000490609 KIAA1671Q9BY89 1806 aa17.97■□□□□ 0.47
COL2A1-207ENST00000490609 STAM2O75886 525 aa17.96■□□□□ 0.47
COL2A1-207ENST00000490609 CHRNA1P02708 482 aa17.96■□□□□ 0.47
COL2A1-207ENST00000490609 CTSHP09668 335 aa17.96■□□□□ 0.47
COL2A1-207ENST00000490609 PCNX4Q63HM2 1172 aa17.96■□□□□ 0.47
COL2A1-207ENST00000490609 ZNF654Q8IZM8 581 aa17.96■□□□□ 0.47
COL2A1-207ENST00000490609 MYOCDQ8IZQ8 938 aa17.96■□□□□ 0.47
COL2A1-207ENST00000490609 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.96■□□□□ 0.47
COL2A1-207ENST00000490609 SENP7Q9BQF6 1050 aa17.96■□□□□ 0.47
COL2A1-207ENST00000490609 RBM8AQ9Y5S9 174 aaKnown RBP17.96■□□□□ 0.47
COL2A1-207ENST00000490609 GSTTP1A0A1W2PQM5 241 aa17.95■□□□□ 0.46
COL2A1-207ENST00000490609 FIBPO43427 364 aa17.95■□□□□ 0.46
COL2A1-207ENST00000490609 KCNA2P16389 499 aa17.95■□□□□ 0.46
COL2A1-207ENST00000490609 ITGB5P18084 799 aa17.95■□□□□ 0.46
COL2A1-207ENST00000490609 SMARCA1P28370 1054 aa17.95■□□□□ 0.46
COL2A1-207ENST00000490609 TRAF1Q13077 416 aa17.95■□□□□ 0.46
COL2A1-207ENST00000490609 NEDD9Q14511 834 aa17.95■□□□□ 0.46
COL2A1-207ENST00000490609 EPC2Q52LR7 807 aa17.95■□□□□ 0.46
COL2A1-207ENST00000490609 RUFY4Q6ZNE9 571 aa17.95■□□□□ 0.46
COL2A1-207ENST00000490609 CATIPQ7Z7H3 387 aa17.95■□□□□ 0.46
COL2A1-207ENST00000490609 LMBR1Q8WVP7 490 aa17.95■□□□□ 0.46
COL2A1-207ENST00000490609 RUFY2Q8WXA3 655 aa17.95■□□□□ 0.46
COL2A1-207ENST00000490609 LRFN3Q9BTN0 628 aa17.95■□□□□ 0.46
COL2A1-207ENST00000490609 LSG1Q9H089 658 aaKnown RBP17.95■□□□□ 0.46
COL2A1-207ENST00000490609 UBE2ZQ9H832 354 aaPredicted RBP17.95■□□□□ 0.46
COL2A1-207ENST00000490609 EVPLQ92817 2033 aa17.94■□□□□ 0.46
COL2A1-207ENST00000490609 AMHP03971 560 aa17.94■□□□□ 0.46
COL2A1-207ENST00000490609 MGAT3Q09327 533 aa17.94■□□□□ 0.46
COL2A1-207ENST00000490609 MARCH8Q5T0T0 291 aa17.94■□□□□ 0.46
COL2A1-207ENST00000490609 RALYLQ86SE5 291 aaKnown RBP17.94■□□□□ 0.46
COL2A1-207ENST00000490609 FBXO22Q8NEZ5 403 aa17.94■□□□□ 0.46
COL2A1-207ENST00000490609 EHMT1Q9H9B1 1298 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms