RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 KDM4AO75164 1064 aa8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 MYL3P08590 195 aa8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 SELPP16109 830 aa8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 GTF2F1P35269 517 aaKnown RBP eCLIP8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 OAZ1P54368 228 aa8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 PTPN11Q06124 597 aaPredicted RBP8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 MBTPS1Q14703 1052 aa8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 TNNI3KQ59H18 835 aa8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 CCDC158Q5M9N0 1113 aa8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 TMED8Q6PL24 325 aaPredicted RBP8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 LRRC8DQ7L1W4 858 aa8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 EEPD1Q7L9B9 569 aa8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 DGLUCYQ7Z3D6 616 aa8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 FBXO11Q86XK2 927 aa8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 MORC4Q8TE76 937 aa8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 CCDC17Q96LX7 622 aa8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 KANSL2Q9H9L4 492 aa8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 VTA1Q9NP79 307 aa8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 GPR108Q9NPR9 543 aa8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 CD207Q9UJ71 328 aa8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 FPGT-TNNI3KV9GXZ4 949 aa8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 GCN1Q92616 2671 aaKnown RBP8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 PPFIA3O75145 1194 aa8.57□□□□□ -1.04
PDLIM1-203ENST00000490391 LINC00271P0C7V0 271 aa8.57□□□□□ -1.04
PDLIM1-203ENST00000490391 CPT1AP50416 773 aa8.57□□□□□ -1.04
PDLIM1-203ENST00000490391 TMEM192Q8IY95 271 aa8.57□□□□□ -1.04
PDLIM1-203ENST00000490391 SMRP1Q8NCR6 262 aa8.57□□□□□ -1.04
PDLIM1-203ENST00000490391 SDR42E1Q8WUS8 393 aa8.57□□□□□ -1.04
PDLIM1-203ENST00000490391 CRBNQ96SW2 442 aa8.57□□□□□ -1.04
PDLIM1-203ENST00000490391 ANTXR1Q9H6X2 564 aa8.57□□□□□ -1.04
PDLIM1-203ENST00000490391 HOMER2Q9NSB8 354 aa8.57□□□□□ -1.04
PDLIM1-203ENST00000490391 DBNLQ9UJU6 430 aaKnown RBP8.57□□□□□ -1.04
PDLIM1-203ENST00000490391 HDAC5Q9UQL6 1122 aa8.57□□□□□ -1.04
PDLIM1-203ENST00000490391 RBM47A0AV96 593 aaKnown RBP8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 A6NJR5 290 aa8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 USP17L12C9JPN9 530 aa8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 USP17L21D6R901 530 aa8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 ZBED4O75132 1171 aa8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 LGR5O75473 907 aa8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 PARNO95453 639 aaKnown RBP8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 NDUFB10O96000 172 aa8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 ICAM3P32942 547 aa8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 CDK8P49336 464 aa8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 ADAM15Q13444 863 aa8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 IKBKEQ14164 716 aa8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 PTGISQ16647 500 aa8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 KIAA1211Q6ZU35 1233 aa8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 CCDC155Q8N6L0 562 aa8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 TMEM105Q8N8V8 129 aa8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 RIPOR3Q96MK2 946 aa8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 CRNKL1Q9BZJ0 848 aaKnown RBP8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 ACAD9Q9H845 621 aa8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 TLR7Q9NYK1 1049 aaKnown RBP8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 CLEC1BQ9P126 229 aa8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 NOD1Q9Y239 953 aa8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 COG6Q9Y2V7 657 aa8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 MYO10Q9HD67 2058 aa8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 SMG1Q96Q15 3661 aaKnown RBP8.56□□□□□ -1.04
PDLIM1-203ENST00000490391 CYP2D7A0A087X1C5 515 aa8.55□□□□□ -1.04
PDLIM1-203ENST00000490391 MAGEB6P1A0A0J9YX57 407 aa8.55□□□□□ -1.04
PDLIM1-203ENST00000490391 PNMA6EA0A0J9YXQ4 647 aa8.55□□□□□ -1.04
PDLIM1-203ENST00000490391 F5H6K3 240 aa8.55□□□□□ -1.04
PDLIM1-203ENST00000490391 GRM6O15303 877 aa8.55□□□□□ -1.04
PDLIM1-203ENST00000490391 RAD21O60216 631 aa8.55□□□□□ -1.04
PDLIM1-203ENST00000490391 CKBP12277 381 aa8.55□□□□□ -1.04
PDLIM1-203ENST00000490391 RRP1P56182 461 aaKnown RBP8.55□□□□□ -1.04
PDLIM1-203ENST00000490391 KLRC3Q07444 240 aa8.55□□□□□ -1.04
PDLIM1-203ENST00000490391 G3BP1Q13283 466 aaKnown RBP eCLIP8.55□□□□□ -1.041e-5■■■■□ 21.3
PDLIM1-203ENST00000490391 CAMK1Q14012 370 aa8.55□□□□□ -1.04
PDLIM1-203ENST00000490391 PTPN21Q16825 1174 aa8.55□□□□□ -1.04
PDLIM1-203ENST00000490391 TRIM71Q2Q1W2 868 aaKnown RBP8.55□□□□□ -1.04
PDLIM1-203ENST00000490391 MCTP2Q6DN12 878 aa8.55□□□□□ -1.04
PDLIM1-203ENST00000490391 GDF6Q6KF10 455 aaPredicted RBP8.55□□□□□ -1.04
PDLIM1-203ENST00000490391 C16orf86Q6ZW13 317 aa8.55□□□□□ -1.04
PDLIM1-203ENST00000490391 SESTD1Q86VW0 696 aa8.55□□□□□ -1.04
PDLIM1-203ENST00000490391 MYOCDQ8IZQ8 938 aa8.55□□□□□ -1.04
PDLIM1-203ENST00000490391 LCORLQ8N3X6 602 aa8.55□□□□□ -1.04
PDLIM1-203ENST00000490391 WDR11Q9BZH6 1224 aa8.55□□□□□ -1.04
PDLIM1-203ENST00000490391 RNF146Q9NTX7 359 aa8.55□□□□□ -1.04
PDLIM1-203ENST00000490391 DLL3Q9NYJ7 618 aa8.55□□□□□ -1.04
PDLIM1-203ENST00000490391 ASH1LQ9NR48 2969 aaKnown RBP8.55□□□□□ -1.04
PDLIM1-203ENST00000490391 MYH4Q9Y623 1939 aa8.54□□□□□ -1.04
PDLIM1-203ENST00000490391 CNOT1A5YKK6 2376 aaKnown RBP8.54□□□□□ -1.04
PDLIM1-203ENST00000490391 C5orf67F2Z3F1 127 aa8.54□□□□□ -1.04
PDLIM1-203ENST00000490391 JUNDP17535 347 aa8.54□□□□□ -1.04
PDLIM1-203ENST00000490391 SH3BP2P78314 561 aa8.54□□□□□ -1.04
PDLIM1-203ENST00000490391 KRT76Q01546 638 aa8.54□□□□□ -1.04
PDLIM1-203ENST00000490391 COASYQ13057 564 aa8.54□□□□□ -1.04
PDLIM1-203ENST00000490391 PUM1Q14671 1186 aaKnown RBP eCLIP8.54□□□□□ -1.04
PDLIM1-203ENST00000490391 C12orf60Q5U649 245 aa8.54□□□□□ -1.04
PDLIM1-203ENST00000490391 OR6J1Q8NGC5 347 aa8.54□□□□□ -1.04
PDLIM1-203ENST00000490391 WNT8BQ93098 351 aa8.54□□□□□ -1.04
PDLIM1-203ENST00000490391 PHF7Q9BWX1 381 aaPredicted RBP8.54□□□□□ -1.04
PDLIM1-203ENST00000490391 LMAN2LQ9H0V9 348 aa8.54□□□□□ -1.04
PDLIM1-203ENST00000490391 INCENPQ9NQS7 918 aa8.54□□□□□ -1.04
PDLIM1-203ENST00000490391 CYP39A1Q9NYL5 469 aa8.54□□□□□ -1.04
PDLIM1-203ENST00000490391 USP15Q9Y4E8 981 aaPredicted RBP8.54□□□□□ -1.04
PDLIM1-203ENST00000490391 DSPP15924 2871 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms