RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 NEDD9Q14511 834 aa16.36■□□□□ 0.21
SRGAP3-208ENST00000490348 PRR16Q569H4 304 aa16.36■□□□□ 0.21
SRGAP3-208ENST00000490348 PLA2G4DQ86XP0 818 aa16.36■□□□□ 0.21
SRGAP3-208ENST00000490348 MBOAT7Q96N66 472 aa16.36■□□□□ 0.21
SRGAP3-208ENST00000490348 SMC3Q9UQE7 1217 aa16.36■□□□□ 0.21
SRGAP3-208ENST00000490348 GRIN2DO15399 1336 aa16.36■□□□□ 0.21
SRGAP3-208ENST00000490348 CYP3A7-CYP3A51PA0A087WV96 503 aa16.35■□□□□ 0.21
SRGAP3-208ENST00000490348 CYP3A7P24462 503 aa16.35■□□□□ 0.21
SRGAP3-208ENST00000490348 SNX17Q15036 470 aa16.35■□□□□ 0.21
SRGAP3-208ENST00000490348 SLC39A5Q6ZMH5 540 aa16.35■□□□□ 0.21
SRGAP3-208ENST00000490348 MLXIPQ9HAP2 919 aa16.35■□□□□ 0.21
SRGAP3-208ENST00000490348 BRMS1Q9HCU9 246 aa16.35■□□□□ 0.21
SRGAP3-208ENST00000490348 DHX15O43143 795 aaKnown RBP16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 SLC37A4O43826 429 aa16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 MYL3P08590 195 aa16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 PSMC6P62333 389 aa16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 MLLT1Q03111 559 aaPredicted RBP16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 LETM2Q2VYF4 491 aa16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 NEK8Q86SG6 692 aa16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 KAT2BQ92831 832 aa16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 GJA10Q969M2 543 aa16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 GPR20Q99678 358 aa16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 STARD7Q9NQZ5 370 aa16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 SCN10AQ9Y5Y9 1956 aa16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 MSH4O15457 936 aa16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 ZEB2O60315 1214 aa16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 ZNF286BP0CG31 522 aa16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 SETQ01105 290 aaPredicted RBP16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 SP4Q02446 784 aa16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 Q4G0T1 1027 aa16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 PPP1R13LQ8WUF5 828 aa16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 INTS4Q96HW7 963 aaKnown RBP16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 GLT1D1Q96MS3 346 aa16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 FOXP1Q9H334 677 aaPredicted RBP16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 FOXD4L1Q9NU39 408 aa16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 ELP1O95163 1332 aa16.34■□□□□ 0.21
SRGAP3-208ENST00000490348 IPO5O00410 1097 aaKnown RBP16.33■□□□□ 0.2
SRGAP3-208ENST00000490348 CCNE2O96020 404 aa16.33■□□□□ 0.2
SRGAP3-208ENST00000490348 U2AF2P26368 475 aaKnown RBP eCLIP16.33■□□□□ 0.2
SRGAP3-208ENST00000490348 SAFBQ15424 915 aaKnown RBP eCLIP16.33■□□□□ 0.2
SRGAP3-208ENST00000490348 DGKDQ16760 1214 aa16.33■□□□□ 0.2
SRGAP3-208ENST00000490348 BRDTQ58F21 947 aaPredicted RBP16.33■□□□□ 0.2
SRGAP3-208ENST00000490348 C1orf53Q5VUE5 145 aa16.33■□□□□ 0.2
SRGAP3-208ENST00000490348 MOXD1Q6UVY6 613 aa16.33■□□□□ 0.2
SRGAP3-208ENST00000490348 HSCBQ8IWL3 235 aa16.33■□□□□ 0.2
SRGAP3-208ENST00000490348 GIMAP8Q8ND71 665 aaPredicted RBP16.33■□□□□ 0.2
SRGAP3-208ENST00000490348 ZNF577Q9BSK1 485 aa16.33■□□□□ 0.2
SRGAP3-208ENST00000490348 C16orf70Q9BSU1 422 aa16.33■□□□□ 0.2
SRGAP3-208ENST00000490348 JPH1Q9HDC5 661 aaPredicted RBP16.33■□□□□ 0.2
SRGAP3-208ENST00000490348 POLR3EQ9NVU0 708 aa16.33■□□□□ 0.2
SRGAP3-208ENST00000490348 PCDH10Q9P2E7 1040 aa16.33■□□□□ 0.2
SRGAP3-208ENST00000490348 NFASCO94856 1347 aa16.33■□□□□ 0.2
SRGAP3-208ENST00000490348 GSTTP1A0A1W2PQM5 241 aa16.32■□□□□ 0.2
SRGAP3-208ENST00000490348 PPFIA4O75335 1185 aa16.32■□□□□ 0.2
SRGAP3-208ENST00000490348 CABYRO75952 493 aa16.32■□□□□ 0.2
SRGAP3-208ENST00000490348 CDK7P50613 346 aa16.32■□□□□ 0.2
SRGAP3-208ENST00000490348 TRIM60Q495X7 471 aa16.32■□□□□ 0.2
SRGAP3-208ENST00000490348 PPP4R3AQ6IN85 833 aa16.32■□□□□ 0.2
SRGAP3-208ENST00000490348 NOSTRINQ8IVI9 506 aa16.32■□□□□ 0.2
SRGAP3-208ENST00000490348 SLC43A3Q8NBI5 491 aa16.32■□□□□ 0.2
SRGAP3-208ENST00000490348 ETNPPLQ8TBG4 499 aa16.32■□□□□ 0.2
SRGAP3-208ENST00000490348 MTG1Q9BT17 334 aaPredicted RBP16.32■□□□□ 0.2
SRGAP3-208ENST00000490348 HTATIP2Q9BUP3 242 aa16.32■□□□□ 0.2
SRGAP3-208ENST00000490348 DDX25Q9UHL0 483 aaKnown RBP16.32■□□□□ 0.2
SRGAP3-208ENST00000490348 KIF3AQ9Y496 699 aa16.32■□□□□ 0.2
SRGAP3-208ENST00000490348 NOP56O00567 594 aaKnown RBP16.31■□□□□ 0.2
SRGAP3-208ENST00000490348 CCNT1O60563 726 aaKnown RBP16.31■□□□□ 0.2
SRGAP3-208ENST00000490348 KPNA6O60684 536 aa16.31■□□□□ 0.2
SRGAP3-208ENST00000490348 F2P00734 622 aa16.31■□□□□ 0.2
SRGAP3-208ENST00000490348 RTP1P59025 263 aa16.31■□□□□ 0.2
SRGAP3-208ENST00000490348 ITGA7Q13683 1181 aa16.31■□□□□ 0.2
SRGAP3-208ENST00000490348 TRIM50Q86XT4 487 aa16.31■□□□□ 0.2
SRGAP3-208ENST00000490348 SLC5A5Q92911 643 aa16.31■□□□□ 0.2
SRGAP3-208ENST00000490348 SDF4Q9BRK5 362 aa16.31■□□□□ 0.2
SRGAP3-208ENST00000490348 SLC9A2Q9UBY0 812 aa16.31■□□□□ 0.2
SRGAP3-208ENST00000490348 A0A0U1RQG5 324 aaPredicted RBP16.3■□□□□ 0.2
SRGAP3-208ENST00000490348 DDX39AO00148 427 aaKnown RBP16.3■□□□□ 0.2
SRGAP3-208ENST00000490348 LGALS2P05162 132 aa16.3■□□□□ 0.2
SRGAP3-208ENST00000490348 LARP1BQ659C4 914 aaKnown RBP16.3■□□□□ 0.2
SRGAP3-208ENST00000490348 DPF3Q92784 378 aa16.3■□□□□ 0.2
SRGAP3-208ENST00000490348 VTI1AQ96AJ9 217 aa16.3■□□□□ 0.2
SRGAP3-208ENST00000490348 PCYT2Q99447 389 aa16.3■□□□□ 0.2
SRGAP3-208ENST00000490348 KCNMB3Q9NPA1 279 aa16.3■□□□□ 0.2
SRGAP3-208ENST00000490348 ARVCFO00192 962 aa16.3■□□□□ 0.2
SRGAP3-208ENST00000490348 HAS3O00219 553 aa16.3■□□□□ 0.2
SRGAP3-208ENST00000490348 GCFC2P16383 781 aaKnown RBP16.3■□□□□ 0.2
SRGAP3-208ENST00000490348 TCF7P36402 384 aaPredicted RBP16.3■□□□□ 0.2
SRGAP3-208ENST00000490348 ACTR2P61160 394 aa16.3■□□□□ 0.2
SRGAP3-208ENST00000490348 TLE2Q04725 743 aa16.3■□□□□ 0.2
SRGAP3-208ENST00000490348 NBPF20Q3BBV1 942 aa16.3■□□□□ 0.2
SRGAP3-208ENST00000490348 ANKRD33Q7Z3H0 272 aa16.3■□□□□ 0.2
SRGAP3-208ENST00000490348 POTEDQ86YR6 584 aa16.3■□□□□ 0.2
SRGAP3-208ENST00000490348 HAS1Q92839 578 aa16.3■□□□□ 0.2
SRGAP3-208ENST00000490348 ATP11BQ9Y2G3 1177 aa16.3■□□□□ 0.2
SRGAP3-208ENST00000490348 H3BQV1 296 aa16.29■□□□□ 0.2
SRGAP3-208ENST00000490348 EVI5O60447 810 aa16.29■□□□□ 0.2
SRGAP3-208ENST00000490348 PQBP1O60828 265 aaKnown RBP16.29■□□□□ 0.2
SRGAP3-208ENST00000490348 PSMD10O75832 226 aa16.29■□□□□ 0.2
SRGAP3-208ENST00000490348 ATG7O95352 703 aa16.29■□□□□ 0.2
SRGAP3-208ENST00000490348 TOB1P50616 345 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms