RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 NEMFO60524 1076 aa14.12□□□□□ -0.15
HDAC1-210ENST00000490081 PPFIA4O75335 1185 aa14.12□□□□□ -0.15
HDAC1-210ENST00000490081 PSMD10O75832 226 aa14.12□□□□□ -0.15
HDAC1-210ENST00000490081 ATG7O95352 703 aa14.12□□□□□ -0.15
HDAC1-210ENST00000490081 BAG4O95429 457 aaKnown RBP14.12□□□□□ -0.15
HDAC1-210ENST00000490081 EN2P19622 333 aaPredicted RBP14.12□□□□□ -0.15
HDAC1-210ENST00000490081 UBA1P22314 1058 aaKnown RBP14.12□□□□□ -0.15
HDAC1-210ENST00000490081 CNGA1P29973 690 aa14.12□□□□□ -0.15
HDAC1-210ENST00000490081 ARHGAP1Q07960 439 aa14.12□□□□□ -0.15
HDAC1-210ENST00000490081 MTFR1Q15390 333 aa14.12□□□□□ -0.15
HDAC1-210ENST00000490081 LY6KQ17RY6 165 aa14.12□□□□□ -0.15
HDAC1-210ENST00000490081 ARL6IP4Q66PJ3 421 aaKnown RBP14.12□□□□□ -0.15
HDAC1-210ENST00000490081 DHX37Q8IY37 1157 aaKnown RBP14.12□□□□□ -0.15
HDAC1-210ENST00000490081 KLHDC9Q8NEP7 349 aa14.12□□□□□ -0.15
HDAC1-210ENST00000490081 RDM1Q8NG50 284 aa14.12□□□□□ -0.15
HDAC1-210ENST00000490081 HAS1Q92839 578 aa14.12□□□□□ -0.15
HDAC1-210ENST00000490081 ZNF396Q96N95 335 aaPredicted RBP14.12□□□□□ -0.15
HDAC1-210ENST00000490081 ZNF577Q9BSK1 485 aa14.12□□□□□ -0.15
HDAC1-210ENST00000490081 RNF208Q9H0X6 261 aa14.12□□□□□ -0.15
HDAC1-210ENST00000490081 CHMP5Q9NZZ3 219 aa14.12□□□□□ -0.15
HDAC1-210ENST00000490081 CEP131Q9UPN4 1083 aa14.12□□□□□ -0.15
HDAC1-210ENST00000490081 PCDHB6Q9Y5E3 794 aa14.12□□□□□ -0.15
HDAC1-210ENST00000490081 KIAA0100Q14667 2235 aaKnown RBP14.12□□□□□ -0.15
HDAC1-210ENST00000490081 CTAGE5O15320 804 aa14.11□□□□□ -0.15
HDAC1-210ENST00000490081 KPNA6O60684 536 aa14.11□□□□□ -0.15
HDAC1-210ENST00000490081 ADAMTS4O75173 837 aa14.11□□□□□ -0.15
HDAC1-210ENST00000490081 FARP2O94887 1054 aaPredicted RBP14.11□□□□□ -0.15
HDAC1-210ENST00000490081 SGPL1O95470 568 aa14.11□□□□□ -0.15
HDAC1-210ENST00000490081 MCM7P33993 719 aa14.11□□□□□ -0.15
HDAC1-210ENST00000490081 GJA8P48165 433 aa14.11□□□□□ -0.15
HDAC1-210ENST00000490081 NASPP49321 788 aaPredicted RBP14.11□□□□□ -0.15
HDAC1-210ENST00000490081 ATP2C1P98194 919 aaPredicted RBP14.11□□□□□ -0.15
HDAC1-210ENST00000490081 ITGB3BPQ13352 177 aaPredicted RBP14.11□□□□□ -0.15
HDAC1-210ENST00000490081 PDIA5Q14554 519 aa14.11□□□□□ -0.15
HDAC1-210ENST00000490081 CCSAPQ6IQ19 270 aaPredicted RBP14.11□□□□□ -0.15
HDAC1-210ENST00000490081 ZNF746Q6NUN9 644 aaPredicted RBP14.11□□□□□ -0.15
HDAC1-210ENST00000490081 ARRDC4Q8NCT1 418 aa14.11□□□□□ -0.15
HDAC1-210ENST00000490081 PPTC7Q8NI37 304 aa14.11□□□□□ -0.15
HDAC1-210ENST00000490081 ZFP91Q96JP5 570 aaPredicted RBP14.11□□□□□ -0.15
HDAC1-210ENST00000490081 SDF4Q9BRK5 362 aa14.11□□□□□ -0.15
HDAC1-210ENST00000490081 TSEN34Q9BSV6 310 aaKnown RBP14.11□□□□□ -0.15
HDAC1-210ENST00000490081 AP5M1Q9H0R1 490 aa14.11□□□□□ -0.15
HDAC1-210ENST00000490081 SPC25Q9HBM1 224 aa14.11□□□□□ -0.15
HDAC1-210ENST00000490081 CFAP45Q9UL16 551 aa14.11□□□□□ -0.15
HDAC1-210ENST00000490081 DOCK5Q9H7D0 1870 aa14.1□□□□□ -0.15
HDAC1-210ENST00000490081 TCHHQ07283 1943 aa14.1□□□□□ -0.15
HDAC1-210ENST00000490081 WDR81Q562E7 1941 aa14.1□□□□□ -0.15
HDAC1-210ENST00000490081 DYNC1LI2O43237 492 aaPredicted RBP14.1□□□□□ -0.15
HDAC1-210ENST00000490081 GGPS1O95749 300 aa14.1□□□□□ -0.15
HDAC1-210ENST00000490081 CPT1AP50416 773 aa14.1□□□□□ -0.15
HDAC1-210ENST00000490081 KRT76Q01546 638 aa14.1□□□□□ -0.15
HDAC1-210ENST00000490081 PTGDRQ13258 359 aa14.1□□□□□ -0.15
HDAC1-210ENST00000490081 PPP2R5CQ13362 524 aa14.1□□□□□ -0.15
HDAC1-210ENST00000490081 PTPAQ15257 358 aa14.1□□□□□ -0.15
HDAC1-210ENST00000490081 ZNF174Q15697 407 aa14.1□□□□□ -0.15
HDAC1-210ENST00000490081 CALCRLQ16602 461 aa14.1□□□□□ -0.15
HDAC1-210ENST00000490081 BRDTQ58F21 947 aaPredicted RBP14.1□□□□□ -0.15
HDAC1-210ENST00000490081 TMEM63BQ5T3F8 832 aa14.1□□□□□ -0.15
HDAC1-210ENST00000490081 ANO1Q5XXA6 986 aa14.1□□□□□ -0.15
HDAC1-210ENST00000490081 TLK2Q86UE8 772 aa14.1□□□□□ -0.15
HDAC1-210ENST00000490081 SMAP1Q8IYB5 467 aaPredicted RBP14.1□□□□□ -0.15
HDAC1-210ENST00000490081 ANKLE1Q8NAG6 615 aa14.1□□□□□ -0.15
HDAC1-210ENST00000490081 TMEM106CQ9BVX2 250 aa14.1□□□□□ -0.15
HDAC1-210ENST00000490081 MLXIPQ9HAP2 919 aa14.1□□□□□ -0.15
HDAC1-210ENST00000490081 JPH1Q9HDC5 661 aaPredicted RBP14.1□□□□□ -0.15
HDAC1-210ENST00000490081 XPNPEP3Q9NQH7 507 aa14.1□□□□□ -0.15
HDAC1-210ENST00000490081 SLC9A2Q9UBY0 812 aa14.1□□□□□ -0.15
HDAC1-210ENST00000490081 PCDHA12Q9UN75 941 aa14.1□□□□□ -0.15
HDAC1-210ENST00000490081 IGKV6D-21A0A0A0MT36 114 aa14.09□□□□□ -0.15
HDAC1-210ENST00000490081 GAS7O60861 476 aa14.09□□□□□ -0.15
HDAC1-210ENST00000490081 YEATS4O95619 227 aa14.09□□□□□ -0.15
HDAC1-210ENST00000490081 OR52Z1P0C646 297 aa14.09□□□□□ -0.15
HDAC1-210ENST00000490081 SFNP31947 248 aa14.09□□□□□ -0.15
HDAC1-210ENST00000490081 FXR2P51116 673 aaKnown RBP eCLIP14.09□□□□□ -0.153e-7■■■□□ 15.4
HDAC1-210ENST00000490081 SPIRE1Q08AE8 756 aa14.09□□□□□ -0.15
HDAC1-210ENST00000490081 SLC39A14Q15043 492 aa14.09□□□□□ -0.15
HDAC1-210ENST00000490081 SF3A1Q15459 793 aaKnown RBP14.09□□□□□ -0.15
HDAC1-210ENST00000490081 LRCH2Q5VUJ6 765 aa14.09□□□□□ -0.15
HDAC1-210ENST00000490081 CYFIP1Q7L576 1253 aa14.09□□□□□ -0.15
HDAC1-210ENST00000490081 RNF180Q86T96 592 aa14.09□□□□□ -0.15
HDAC1-210ENST00000490081 PCSK9Q8NBP7 692 aaKnown RBP14.09□□□□□ -0.15
HDAC1-210ENST00000490081 SEPT1Q8WYJ6 367 aa14.09□□□□□ -0.15
HDAC1-210ENST00000490081 DEFB118Q96PH6 123 aa14.09□□□□□ -0.15
HDAC1-210ENST00000490081 GPR20Q99678 358 aa14.09□□□□□ -0.15
HDAC1-210ENST00000490081 TEKT3Q9BXF9 490 aa14.09□□□□□ -0.15
HDAC1-210ENST00000490081 TMEM60Q9H2L4 133 aa14.09□□□□□ -0.15
HDAC1-210ENST00000490081 STK24Q9Y6E0 443 aa14.09□□□□□ -0.15
HDAC1-210ENST00000490081 SYNRGQ9UMZ2 1314 aa14.09□□□□□ -0.15
HDAC1-210ENST00000490081 MKI67P46013 3256 aaKnown RBP14.09□□□□□ -0.15
HDAC1-210ENST00000490081 ZEB2O60315 1214 aa14.08□□□□□ -0.16
HDAC1-210ENST00000490081 ATP2B1P20020 1258 aa14.08□□□□□ -0.16
HDAC1-210ENST00000490081 FSCN1Q16658 493 aaKnown RBP14.08□□□□□ -0.16
HDAC1-210ENST00000490081 HSDL1Q3SXM5 330 aa14.08□□□□□ -0.16
HDAC1-210ENST00000490081 ABHD15Q6UXT9 468 aa14.08□□□□□ -0.16
HDAC1-210ENST00000490081 LINC00301Q8NCQ3 95 aa14.08□□□□□ -0.16
HDAC1-210ENST00000490081 OR6J1Q8NGC5 347 aa14.08□□□□□ -0.16
HDAC1-210ENST00000490081 U2AF1L4Q8WU68 220 aaKnown RBP14.08□□□□□ -0.16
HDAC1-210ENST00000490081 COPS5Q92905 334 aa14.08□□□□□ -0.16
HDAC1-210ENST00000490081 FERMT2Q96AC1 680 aa14.08□□□□□ -0.16
HDAC1-210ENST00000490081 SPATA33Q96N06 139 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms