RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 ARMC5Q96C12 935 aa6.05□□□□□ -1.44
HMGN1-218ENST00000490032 BDH2Q9BUT1 245 aa6.05□□□□□ -1.44
HMGN1-218ENST00000490032 KRTAP4-2Q9BYR5 136 aa6.05□□□□□ -1.44
HMGN1-218ENST00000490032 TANGO6Q9C0B7 1094 aa6.05□□□□□ -1.44
HMGN1-218ENST00000490032 WASF3Q9UPY6 502 aa6.05□□□□□ -1.44
HMGN1-218ENST00000490032 BLACEA4D250 179 aa6.04□□□□□ -1.44
HMGN1-218ENST00000490032 C9orf118A6NHY6 69 aa6.04□□□□□ -1.44
HMGN1-218ENST00000490032 CNR2P34972 360 aa6.04□□□□□ -1.44
HMGN1-218ENST00000490032 PLP2Q04941 152 aa6.04□□□□□ -1.44
HMGN1-218ENST00000490032 PROSER1Q86XN7 944 aa6.04□□□□□ -1.44
HMGN1-218ENST00000490032 TXNDC5Q8NBS9 432 aaKnown RBP6.04□□□□□ -1.44
HMGN1-218ENST00000490032 DDX1Q92499 740 aaKnown RBP6.04□□□□□ -1.44
HMGN1-218ENST00000490032 TMEM209Q96SK2 561 aa6.04□□□□□ -1.44
HMGN1-218ENST00000490032 KRTAP4-11Q9BYQ6 195 aa6.04□□□□□ -1.44
HMGN1-218ENST00000490032 SIRPGQ9P1W8 387 aa6.04□□□□□ -1.44
HMGN1-218ENST00000490032 ASXL2Q76L83 1435 aa6.04□□□□□ -1.44
HMGN1-218ENST00000490032 MROH6A6NGR9 719 aa6.03□□□□□ -1.44
HMGN1-218ENST00000490032 DDX3XO00571 662 aaKnown RBP eCLIP6.03□□□□□ -1.44
HMGN1-218ENST00000490032 SLC27A2O14975 620 aa6.03□□□□□ -1.44
HMGN1-218ENST00000490032 KRTAP10-2P60368 255 aa6.03□□□□□ -1.44
HMGN1-218ENST00000490032 KIAA2012Q0VF49 1180 aa6.03□□□□□ -1.44
HMGN1-218ENST00000490032 MCTP2Q6DN12 878 aa6.03□□□□□ -1.44
HMGN1-218ENST00000490032 PRRT2Q7Z6L0 340 aaPredicted RBP6.03□□□□□ -1.44
HMGN1-218ENST00000490032 SCUBE1Q8IWY4 988 aa6.03□□□□□ -1.44
HMGN1-218ENST00000490032 CLEC4DQ8WXI8 215 aa6.03□□□□□ -1.44
HMGN1-218ENST00000490032 CLIC6Q96NY7 704 aa6.03□□□□□ -1.44
HMGN1-218ENST00000490032 WRNIP1Q96S55 665 aa6.03□□□□□ -1.44
HMGN1-218ENST00000490032 CYP7B1O75881 506 aa6.02□□□□□ -1.45
HMGN1-218ENST00000490032 SOD2P04179 222 aa6.02□□□□□ -1.45
HMGN1-218ENST00000490032 NFKB2Q00653 900 aa6.02□□□□□ -1.45
HMGN1-218ENST00000490032 RBL2Q08999 1139 aa6.02□□□□□ -1.45
HMGN1-218ENST00000490032 SPIRE1Q08AE8 756 aa6.02□□□□□ -1.45
HMGN1-218ENST00000490032 SERINC3Q13530 473 aa6.02□□□□□ -1.45
HMGN1-218ENST00000490032 SPATS1Q496A3 300 aa6.02□□□□□ -1.45
HMGN1-218ENST00000490032 MTERF2Q49AM1 385 aa6.02□□□□□ -1.45
HMGN1-218ENST00000490032 MAMDC2Q7Z304 686 aaPredicted RBP6.02□□□□□ -1.45
HMGN1-218ENST00000490032 ZBTB38Q8NAP3 1195 aaPredicted RBP6.02□□□□□ -1.45
HMGN1-218ENST00000490032 YTHDC1Q96MU7 727 aaKnown RBP6.02□□□□□ -1.45
HMGN1-218ENST00000490032 RBM15Q96T37 977 aaKnown RBP eCLIP6.02□□□□□ -1.45
HMGN1-218ENST00000490032 HIRIP3Q9BW71 556 aaPredicted RBP6.02□□□□□ -1.45
HMGN1-218ENST00000490032 NUB1Q9Y5A7 615 aa6.02□□□□□ -1.45
HMGN1-218ENST00000490032 FAM47E-STBD1D6RA91 191 aa6.01□□□□□ -1.45
HMGN1-218ENST00000490032 WNT9AO14904 365 aa6.01□□□□□ -1.45
HMGN1-218ENST00000490032 NKRFO15226 690 aaKnown RBP eCLIP6.01□□□□□ -1.45
HMGN1-218ENST00000490032 ITGB3P05106 788 aa6.01□□□□□ -1.45
HMGN1-218ENST00000490032 C6orf222P0C671 652 aaPredicted RBP6.01□□□□□ -1.45
HMGN1-218ENST00000490032 GNAT1P11488 350 aa6.01□□□□□ -1.45
HMGN1-218ENST00000490032 COL6A2P12110 1019 aa6.01□□□□□ -1.45
HMGN1-218ENST00000490032 FAHP16930 419 aa6.01□□□□□ -1.45
HMGN1-218ENST00000490032 IL13P35225 146 aa6.01□□□□□ -1.45
HMGN1-218ENST00000490032 EPHA5P54756 1037 aa6.01□□□□□ -1.45
HMGN1-218ENST00000490032 MLLT6P55198 1093 aaPredicted RBP6.01□□□□□ -1.45
HMGN1-218ENST00000490032 SSRP1Q08945 709 aaKnown RBP6.01□□□□□ -1.45
HMGN1-218ENST00000490032 TUSC3Q13454 348 aa6.01□□□□□ -1.45
HMGN1-218ENST00000490032 LONRF2Q1L5Z9 754 aa6.01□□□□□ -1.45
HMGN1-218ENST00000490032 PRAMEF18Q5VWM3 479 aa6.01□□□□□ -1.45
HMGN1-218ENST00000490032 FOXB2Q5VYV0 432 aa6.01□□□□□ -1.45
HMGN1-218ENST00000490032 BORAQ6PGQ7 559 aa6.01□□□□□ -1.45
HMGN1-218ENST00000490032 LRP10Q7Z4F1 713 aa6.01□□□□□ -1.45
HMGN1-218ENST00000490032 FAM124AQ86V42 546 aa6.01□□□□□ -1.45
HMGN1-218ENST00000490032 LGI4Q8N135 537 aa6.01□□□□□ -1.45
HMGN1-218ENST00000490032 DTX3Q8N9I9 347 aa6.01□□□□□ -1.45
HMGN1-218ENST00000490032 ZCCHC14Q8WYQ9 949 aaKnown RBP6.01□□□□□ -1.45
HMGN1-218ENST00000490032 MBD6Q96DN6 1003 aa6.01□□□□□ -1.45
HMGN1-218ENST00000490032 LCORQ96JN0 433 aaPredicted RBP6.01□□□□□ -1.45
HMGN1-218ENST00000490032 ZSWIM3Q96MP5 696 aa6.01□□□□□ -1.45
HMGN1-218ENST00000490032 KCNJ15Q99712 375 aa6.01□□□□□ -1.45
HMGN1-218ENST00000490032 IPPKQ9H8X2 491 aa6.01□□□□□ -1.45
HMGN1-218ENST00000490032 TELO2Q9Y4R8 837 aa6.01□□□□□ -1.45
HMGN1-218ENST00000490032 TRBV23-1A0A0A0MS06 115 aa6□□□□□ -1.45
HMGN1-218ENST00000490032 K7ESM1 405 aa6□□□□□ -1.45
HMGN1-218ENST00000490032 AQP7O14520 342 aa6□□□□□ -1.45
HMGN1-218ENST00000490032 DIAPH1O60610 1272 aaKnown RBP6□□□□□ -1.45
HMGN1-218ENST00000490032 ADRB1P08588 477 aa6□□□□□ -1.45
HMGN1-218ENST00000490032 SUMO1P63165 101 aaKnown RBP6□□□□□ -1.45
HMGN1-218ENST00000490032 GRIN1Q05586 938 aa6□□□□□ -1.45
HMGN1-218ENST00000490032 RASA3Q14644 834 aa6□□□□□ -1.45
HMGN1-218ENST00000490032 TBC1D10BQ4KMP7 808 aaPredicted RBP6□□□□□ -1.45
HMGN1-218ENST00000490032 PAN2Q504Q3 1202 aaKnown RBP6□□□□□ -1.45
HMGN1-218ENST00000490032 TMC5Q6UXY8 1006 aa6□□□□□ -1.45
HMGN1-218ENST00000490032 RBM12BQ8IXT5 1001 aaKnown RBP6□□□□□ -1.45
HMGN1-218ENST00000490032 PTPRN2Q92932 1015 aa6□□□□□ -1.45
HMGN1-218ENST00000490032 ALG1Q9BT22 464 aa6□□□□□ -1.45
HMGN1-218ENST00000490032 DLL4Q9NR61 685 aa6□□□□□ -1.45
HMGN1-218ENST00000490032 RBPJLQ9UBG7 517 aa6□□□□□ -1.45
HMGN1-218ENST00000490032 PFDN2Q9UHV9 154 aa6□□□□□ -1.45
HMGN1-218ENST00000490032 DSEQ9UL01 958 aa6□□□□□ -1.45
HMGN1-218ENST00000490032 INVSQ9Y283 1065 aa6□□□□□ -1.45
HMGN1-218ENST00000490032 TRAF6Q9Y4K3 522 aa6□□□□□ -1.45
HMGN1-218ENST00000490032 PLATP00750 562 aa5.99□□□□□ -1.45
HMGN1-218ENST00000490032 LTFP02788 710 aa5.99□□□□□ -1.45
HMGN1-218ENST00000490032 COL6A1P12109 1028 aa5.99□□□□□ -1.45
HMGN1-218ENST00000490032 GTF2F1P35269 517 aaKnown RBP eCLIP5.99□□□□□ -1.45
HMGN1-218ENST00000490032 FAM209AQ5JX71 171 aa5.99□□□□□ -1.45
HMGN1-218ENST00000490032 VASNQ6EMK4 673 aa5.99□□□□□ -1.45
HMGN1-218ENST00000490032 PKN3Q6P5Z2 889 aa5.99□□□□□ -1.45
HMGN1-218ENST00000490032 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.99□□□□□ -1.45
HMGN1-218ENST00000490032 EXOC2Q96KP1 924 aa5.99□□□□□ -1.45
HMGN1-218ENST00000490032 CDC6Q99741 560 aa5.99□□□□□ -1.45
HMGN1-218ENST00000490032 L2HGDHQ9H9P8 463 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms