RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 DZIP3Q86Y13 1208 aaKnown RBP5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 FBXL16Q8N461 479 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 CCDC24Q8N4L8 307 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 CCDC155Q8N6L0 562 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 CNBD1Q8NA66 436 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 C1orf216Q8TAB5 229 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 NOC3LQ8WTT2 800 aaKnown RBP5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 PPP1R14BQ96C90 147 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 CHMP6Q96FZ7 201 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 NUP88Q99567 741 aaPredicted RBP5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 FSD1Q9BTV5 496 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 ZCWPW1Q9H0M4 648 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 UNC93B1Q9H1C4 597 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 CNOT10Q9H9A5 744 aaKnown RBP5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 PIDD1Q9HB75 910 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 LIMA1Q9UHB6 759 aaKnown RBP5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 SNX12Q9UMY4 172 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 GPSM3Q9Y4H4 160 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 SRCAPQ6ZRS2 3230 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 PXDNLA1KZ92 1463 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 PHF20L1A8MW92 1017 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 HIP1RO75146 1068 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 ATP6V1G1O75348 118 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 GBP1P32455 592 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 HPDP32754 393 aaPredicted RBP5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 ZNF131P52739 623 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 POLE2P56282 527 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 RAB15P59190 212 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 HERVK_113P62684 666 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 LACTBP83111 547 aaPredicted RBP5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 ATP11AP98196 1134 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 SLC7A5Q01650 507 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 KIF23Q02241 960 aaPredicted RBP5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 KIF5AQ12840 1032 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 MAP3K12Q12852 859 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 PTPAQ15257 358 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 IMMTQ16891 758 aaKnown RBP5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 LINC01559Q495D7 138 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 C4orf48Q5BLP8 95 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 HAUS3Q68CZ6 603 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 TRMT44Q8IYL2 757 aaKnown RBP5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 SYCP3Q8IZU3 236 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 ARHGAP18Q8N392 663 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 SPATA20Q8TB22 786 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 C17orf50Q8WW18 174 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 KIFAP3Q92845 792 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 IFT74Q96LB3 600 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 FGD4Q96M96 766 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 IWS1Q96ST2 819 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 SPSB2Q99619 263 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 SYT15Q9BQS2 421 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 YIPF2Q9BWQ6 316 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 UBE2OQ9C0C9 1292 aaKnown RBP5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 FAM192AQ9GZU8 254 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 VCX3BQ9H321 246 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 TMEM165Q9HC07 324 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 VCX3AQ9NNX9 186 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 RNF19AQ9NV58 838 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 RNF14Q9UBS8 474 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 PPP1R1BQ9UD71 204 aaPredicted RBP5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 TRIM10Q9UDY6 481 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 CIDEBQ9UHD4 219 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 WDR37Q9Y2I8 494 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 SLC4A7Q9Y6M7 1214 aa5.23□□□□□ -1.57
SNRNP40-206ENST00000489853 ABCC1P33527 1531 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 NPATQ14207 1427 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 RFX7Q2KHR2 1363 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 TACC1O75410 805 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 E2F6O75461 281 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 CYP21A2P08686 494 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 PARP1P09874 1014 aaKnown RBP5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 FAM153BP0C7A2 387 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 GNAZP19086 355 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 FBLN1P23142 703 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 SP100P23497 879 aaPredicted RBP5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 RPL13P26373 211 aaKnown RBP5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 PCK1P35558 622 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 CYLC1P35663 651 aaPredicted RBP5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 PIP4K2AP48426 406 aaPredicted RBP5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 CARSP49589 748 aaKnown RBP5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 ALDH5A1P51649 535 aaPredicted RBP5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 SH3BGRP55822 239 aaPredicted RBP5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 NLRP5P59047 1200 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 SPAG1Q07617 926 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 KLC1Q07866 573 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 FAM153CQ494X1 144 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 ODF2Q5BJF6 829 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 OTUD7BQ6GQQ9 843 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 OR52E8Q6IFG1 317 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 C8orf74Q6P047 294 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 TMEM154Q6P9G4 183 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 TRPM8Q7Z2W7 1104 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 ZNF589Q86UQ0 364 aaPredicted RBP5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 AACSQ86V21 672 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 ERICH1Q86X53 443 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 DYDC1Q8WWB3 177 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 FOXJ1Q92949 421 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 FAM161BQ96MY7 647 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 NDNQ99608 321 aa5.22□□□□□ -1.57
SNRNP40-206ENST00000489853 DNAJC7Q99615 494 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms