RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 EPHB4P54760 987 aa21.84■■□□□ 1.09
EPHB4-207ENST00000489808 FPGSQ05932 587 aa21.84■■□□□ 1.09
EPHB4-207ENST00000489808 MFSD10Q14728 455 aa21.84■■□□□ 1.09
EPHB4-207ENST00000489808 SHHQ15465 462 aa21.84■■□□□ 1.09
EPHB4-207ENST00000489808 LRIT3Q3SXY7 679 aa21.84■■□□□ 1.09
EPHB4-207ENST00000489808 CEP55Q53EZ4 464 aa21.84■■□□□ 1.09
EPHB4-207ENST00000489808 REXO1Q8N1G1 1221 aaKnown RBP21.84■■□□□ 1.09
EPHB4-207ENST00000489808 ALG1Q9BT22 464 aa21.84■■□□□ 1.09
EPHB4-207ENST00000489808 NOC4LQ9BVI4 516 aaKnown RBP21.84■■□□□ 1.09
EPHB4-207ENST00000489808 TELO2Q9Y4R8 837 aa21.84■■□□□ 1.09
EPHB4-207ENST00000489808 CDKL5O76039 1030 aa21.83■■□□□ 1.09
EPHB4-207ENST00000489808 CYP2C9P11712 490 aa21.83■■□□□ 1.09
EPHB4-207ENST00000489808 NLRP5P59047 1200 aa21.83■■□□□ 1.09
EPHB4-207ENST00000489808 ARHGAP4P98171 946 aa21.83■■□□□ 1.09
EPHB4-207ENST00000489808 ME3Q16798 604 aa21.83■■□□□ 1.09
EPHB4-207ENST00000489808 KIAA0753Q2KHM9 967 aa21.83■■□□□ 1.09
EPHB4-207ENST00000489808 TMEM199Q8N511 208 aa21.83■■□□□ 1.09
EPHB4-207ENST00000489808 C7orf31Q8N865 590 aa21.83■■□□□ 1.09
EPHB4-207ENST00000489808 CRYGNQ8WXF5 182 aa21.83■■□□□ 1.09
EPHB4-207ENST00000489808 KCNH7Q9NS40 1196 aa21.83■■□□□ 1.09
EPHB4-207ENST00000489808 HDAC6Q9UBN7 1215 aa21.83■■□□□ 1.09
EPHB4-207ENST00000489808 CTDNEP1O95476 244 aa21.82■■□□□ 1.08
EPHB4-207ENST00000489808 CYP3A4P08684 503 aa21.82■■□□□ 1.08
EPHB4-207ENST00000489808 ARP10275 920 aa21.82■■□□□ 1.08
EPHB4-207ENST00000489808 ZNF76P36508 570 aa21.82■■□□□ 1.08
EPHB4-207ENST00000489808 C9orf50Q5SZB4 431 aa21.82■■□□□ 1.08
EPHB4-207ENST00000489808 GDF6Q6KF10 455 aaPredicted RBP21.82■■□□□ 1.08
EPHB4-207ENST00000489808 RASGRP4Q8TDF6 673 aa21.82■■□□□ 1.08
EPHB4-207ENST00000489808 UMODL1Q5DID0 1318 aa21.81■■□□□ 1.08
EPHB4-207ENST00000489808 H3BRB1 525 aa21.81■■□□□ 1.08
EPHB4-207ENST00000489808 SOX1O00570 391 aaPredicted RBP21.81■■□□□ 1.08
EPHB4-207ENST00000489808 LGALS2P05162 132 aa21.81■■□□□ 1.08
EPHB4-207ENST00000489808 CSF2RAP15509 400 aa21.81■■□□□ 1.08
EPHB4-207ENST00000489808 SP4Q02446 784 aa21.81■■□□□ 1.08
EPHB4-207ENST00000489808 PPIGQ13427 754 aaKnown RBP eCLIP21.81■■□□□ 1.083e-8■□□□□ 8.9
EPHB4-207ENST00000489808 PTGISQ16647 500 aa21.81■■□□□ 1.08
EPHB4-207ENST00000489808 NIPA1Q7RTP0 329 aa21.81■■□□□ 1.08
EPHB4-207ENST00000489808 FAM177A1Q8N128 213 aaPredicted RBP21.81■■□□□ 1.08
EPHB4-207ENST00000489808 NECAB1Q8N987 351 aa21.81■■□□□ 1.08
EPHB4-207ENST00000489808 AIFM3Q96NN9 605 aa21.81■■□□□ 1.08
EPHB4-207ENST00000489808 TUT1Q9H6E5 874 aaKnown RBP21.81■■□□□ 1.08
EPHB4-207ENST00000489808 PKD2L1Q9P0L9 805 aa21.81■■□□□ 1.08
EPHB4-207ENST00000489808 GTF2IRD1Q9UHL9 959 aa21.81■■□□□ 1.08
EPHB4-207ENST00000489808 SCN10AQ9Y5Y9 1956 aa21.81■■□□□ 1.08
EPHB4-207ENST00000489808 LARGE1O95461 756 aa21.8■■□□□ 1.08
EPHB4-207ENST00000489808 C16orf59Q7L2K0 433 aa21.8■■□□□ 1.08
EPHB4-207ENST00000489808 SEPT1Q8WYJ6 367 aa21.8■■□□□ 1.08
EPHB4-207ENST00000489808 CTAGE1Q96RT6 745 aa21.8■■□□□ 1.08
EPHB4-207ENST00000489808 KIF2CQ99661 725 aa21.8■■□□□ 1.08
EPHB4-207ENST00000489808 C22orf23Q9BZE7 217 aa21.8■■□□□ 1.08
EPHB4-207ENST00000489808 PCDHA4Q9UN74 947 aa21.8■■□□□ 1.08
EPHB4-207ENST00000489808 NOD1Q9Y239 953 aa21.8■■□□□ 1.08
EPHB4-207ENST00000489808 LAMA3Q16787 3333 aa21.79■■□□□ 1.08
EPHB4-207ENST00000489808 GSTTP1A0A1W2PQM5 241 aa21.79■■□□□ 1.08
EPHB4-207ENST00000489808 FAM86B1E9PN63 330 aa21.79■■□□□ 1.08
EPHB4-207ENST00000489808 FAM86B2P0C5J1 330 aa21.79■■□□□ 1.08
EPHB4-207ENST00000489808 CCL23P55773 120 aa21.79■■□□□ 1.08
EPHB4-207ENST00000489808 UTP14CQ5TAP6 766 aaKnown RBP21.79■■□□□ 1.08
EPHB4-207ENST00000489808 GALNT17Q6IS24 598 aa21.79■■□□□ 1.08
EPHB4-207ENST00000489808 GTF3C6Q969F1 213 aa21.79■■□□□ 1.08
EPHB4-207ENST00000489808 WNT8AQ9H1J5 351 aa21.79■■□□□ 1.08
EPHB4-207ENST00000489808 AGO4Q9HCK5 861 aaKnown RBP21.79■■□□□ 1.08
EPHB4-207ENST00000489808 STK36Q9NRP7 1315 aa21.79■■□□□ 1.08
EPHB4-207ENST00000489808 DTNBO60941 627 aa21.78■■□□□ 1.08
EPHB4-207ENST00000489808 RBM25P49756 843 aaKnown RBP21.78■■□□□ 1.08
EPHB4-207ENST00000489808 PLA2G4DQ86XP0 818 aa21.78■■□□□ 1.08
EPHB4-207ENST00000489808 BLIDQ8IZY5 108 aa21.78■■□□□ 1.08
EPHB4-207ENST00000489808 LRCH3Q96II8 777 aa21.78■■□□□ 1.08
EPHB4-207ENST00000489808 IL23AQ9NPF7 189 aa21.78■■□□□ 1.08
EPHB4-207ENST00000489808 NFASCO94856 1347 aa21.78■■□□□ 1.08
EPHB4-207ENST00000489808 IGLV3-22A0A075B6J6 115 aa21.77■■□□□ 1.08
EPHB4-207ENST00000489808 M0R2N6 131 aa21.77■■□□□ 1.08
EPHB4-207ENST00000489808 EDIL3O43854 480 aa21.77■■□□□ 1.08
EPHB4-207ENST00000489808 CIITAP33076 1130 aa21.77■■□□□ 1.08
EPHB4-207ENST00000489808 TCF7P36402 384 aaPredicted RBP21.77■■□□□ 1.08
EPHB4-207ENST00000489808 ZNF200P98182 395 aaPredicted RBP21.77■■□□□ 1.08
EPHB4-207ENST00000489808 ITGB3BPQ13352 177 aaPredicted RBP21.77■■□□□ 1.08
EPHB4-207ENST00000489808 BFSP2Q13515 415 aa21.77■■□□□ 1.08
EPHB4-207ENST00000489808 HIC1Q14526 733 aa21.77■■□□□ 1.08
EPHB4-207ENST00000489808 NPY5RQ15761 445 aa21.77■■□□□ 1.08
EPHB4-207ENST00000489808 TMEM240Q5SV17 173 aa21.77■■□□□ 1.08
EPHB4-207ENST00000489808 RETREG2Q8NC44 543 aa21.77■■□□□ 1.08
EPHB4-207ENST00000489808 DAGLBQ8NCG7 672 aa21.77■■□□□ 1.08
EPHB4-207ENST00000489808 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.77■■□□□ 1.082e-8■■■■□ 25.6
EPHB4-207ENST00000489808 SDF4Q9BRK5 362 aa21.77■■□□□ 1.08
EPHB4-207ENST00000489808 JPH1Q9HDC5 661 aaPredicted RBP21.77■■□□□ 1.08
EPHB4-207ENST00000489808 ORC3Q9UBD5 711 aaPredicted RBP21.77■■□□□ 1.08
EPHB4-207ENST00000489808 SLC9A2Q9UBY0 812 aa21.77■■□□□ 1.08
EPHB4-207ENST00000489808 LIMCH1Q9UPQ0 1083 aa21.77■■□□□ 1.08
EPHB4-207ENST00000489808 LTBP2Q14767 1821 aa21.76■■□□□ 1.07
EPHB4-207ENST00000489808 PITPNM1O00562 1244 aa21.76■■□□□ 1.07
EPHB4-207ENST00000489808 ACRP10323 421 aa21.76■■□□□ 1.07
EPHB4-207ENST00000489808 FDPSP14324 419 aaKnown RBP21.76■■□□□ 1.07
EPHB4-207ENST00000489808 USP11P51784 963 aa21.76■■□□□ 1.07
EPHB4-207ENST00000489808 TRIM50Q86XT4 487 aa21.76■■□□□ 1.07
EPHB4-207ENST00000489808 SCLYQ96I15 445 aa21.76■■□□□ 1.07
EPHB4-207ENST00000489808 ZNF215Q9UL58 517 aaPredicted RBP21.76■■□□□ 1.07
EPHB4-207ENST00000489808 KCNJ14Q9UNX9 436 aa21.76■■□□□ 1.07
EPHB4-207ENST00000489808 SMIM10L2AP0DMW4 78 aa21.75■■□□□ 1.07
EPHB4-207ENST00000489808 SMIM10L2BP0DMW5 78 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms