RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 LRRC55Q6ZSA7 311 aa16.58■□□□□ 0.25
COL9A1-208ENST00000489611 KCNK18Q7Z418 384 aa16.58■□□□□ 0.25
COL9A1-208ENST00000489611 ETNPPLQ8TBG4 499 aa16.58■□□□□ 0.25
COL9A1-208ENST00000489611 FAM151AQ8WW52 585 aa16.58■□□□□ 0.25
COL9A1-208ENST00000489611 KIAA1024Q9UPX6 916 aa16.58■□□□□ 0.25
COL9A1-208ENST00000489611 CLRN2A0PK11 232 aa16.58■□□□□ 0.24
COL9A1-208ENST00000489611 FRMD3A2A2Y4 597 aa16.58■□□□□ 0.24
COL9A1-208ENST00000489611 PLA2G6O60733 806 aa16.58■□□□□ 0.24
COL9A1-208ENST00000489611 GH2P01242 217 aa16.58■□□□□ 0.24
COL9A1-208ENST00000489611 CLCN6P51797 869 aa16.58■□□□□ 0.24
COL9A1-208ENST00000489611 STAT2P52630 851 aa16.58■□□□□ 0.24
COL9A1-208ENST00000489611 TNIP1Q15025 636 aa16.58■□□□□ 0.24
COL9A1-208ENST00000489611 EDRF1Q3B7T1 1238 aa16.58■□□□□ 0.24
COL9A1-208ENST00000489611 SLC35F6Q8N357 371 aa16.58■□□□□ 0.24
COL9A1-208ENST00000489611 LRRN4CLQ8ND94 238 aa16.58■□□□□ 0.24
COL9A1-208ENST00000489611 SH2D4AQ9H788 454 aa16.58■□□□□ 0.24
COL9A1-208ENST00000489611 EHMT1Q9H9B1 1298 aa16.58■□□□□ 0.24
COL9A1-208ENST00000489611 NHEJ1Q9H9Q4 299 aaPredicted RBP16.58■□□□□ 0.24
COL9A1-208ENST00000489611 FAM184BQ9ULE4 1060 aa16.58■□□□□ 0.24
COL9A1-208ENST00000489611 COL4A3BPQ9Y5P4 624 aa16.58■□□□□ 0.24
COL9A1-208ENST00000489611 FZD9O00144 591 aa16.57■□□□□ 0.24
COL9A1-208ENST00000489611 GABPB1Q06547 395 aaPredicted RBP16.57■□□□□ 0.24
COL9A1-208ENST00000489611 SPA17Q15506 151 aa16.57■□□□□ 0.24
COL9A1-208ENST00000489611 KIAA1328Q86T90 577 aa16.57■□□□□ 0.24
COL9A1-208ENST00000489611 RPGRIP1Q96KN7 1286 aa16.57■□□□□ 0.24
COL9A1-208ENST00000489611 ARID3AQ99856 593 aa16.57■□□□□ 0.24
COL9A1-208ENST00000489611 IRX2Q9BZI1 471 aaPredicted RBP16.57■□□□□ 0.24
COL9A1-208ENST00000489611 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.57■□□□□ 0.24
COL9A1-208ENST00000489611 DNM3Q9UQ16 869 aa16.57■□□□□ 0.24
COL9A1-208ENST00000489611 SIK3Q9Y2K2 1263 aa16.57■□□□□ 0.24
COL9A1-208ENST00000489611 TMX2Q9Y320 296 aa16.57■□□□□ 0.24
COL9A1-208ENST00000489611 ANO9A1A5B4 782 aa16.57■□□□□ 0.24
COL9A1-208ENST00000489611 CCDC151A5D8V7 595 aa16.57■□□□□ 0.24
COL9A1-208ENST00000489611 FAM196BA6NMK8 535 aa16.57■□□□□ 0.24
COL9A1-208ENST00000489611 TBC1D12O60347 775 aa16.57■□□□□ 0.24
COL9A1-208ENST00000489611 MUTP22033 750 aa16.57■□□□□ 0.24
COL9A1-208ENST00000489611 BRD3Q15059 726 aa16.57■□□□□ 0.24
COL9A1-208ENST00000489611 CCDC122Q5T0U0 273 aa16.57■□□□□ 0.24
COL9A1-208ENST00000489611 CHURC1Q8WUH1 139 aa16.57■□□□□ 0.24
COL9A1-208ENST00000489611 CCDC42Q96M95 316 aa16.57■□□□□ 0.24
COL9A1-208ENST00000489611 AGPAT5Q9NUQ2 364 aa16.57■□□□□ 0.24
COL9A1-208ENST00000489611 GJA3Q9Y6H8 435 aa16.57■□□□□ 0.24
COL9A1-208ENST00000489611 RASSF10A6NK89 507 aa16.56■□□□□ 0.24
COL9A1-208ENST00000489611 SPDYE4A6NLX3 237 aa16.56■□□□□ 0.24
COL9A1-208ENST00000489611 TCP10L2B9ZVM9 353 aa16.56■□□□□ 0.24
COL9A1-208ENST00000489611 USO1O60763 962 aaKnown RBP16.56■□□□□ 0.24
COL9A1-208ENST00000489611 ZRANB2O95218 330 aaKnown RBP eCLIP16.56■□□□□ 0.24
COL9A1-208ENST00000489611 GDF11O95390 407 aa16.56■□□□□ 0.24
COL9A1-208ENST00000489611 SPIRE1Q08AE8 756 aa16.56■□□□□ 0.24
COL9A1-208ENST00000489611 ECM1Q16610 540 aa16.56■□□□□ 0.24
COL9A1-208ENST00000489611 TEX35Q5T0J7 233 aa16.56■□□□□ 0.24
COL9A1-208ENST00000489611 GPBP1Q86WP2 473 aa16.56■□□□□ 0.24
COL9A1-208ENST00000489611 SYN2Q92777 582 aaPredicted RBP16.56■□□□□ 0.24
COL9A1-208ENST00000489611 POLR3CQ9BUI4 534 aaPredicted RBP16.56■□□□□ 0.24
COL9A1-208ENST00000489611 MYO6Q9UM54 1294 aa16.56■□□□□ 0.24
COL9A1-208ENST00000489611 REXO2Q9Y3B8 237 aaKnown RBP16.56■□□□□ 0.24
COL9A1-208ENST00000489611 ZNF541Q9H0D2 1346 aa16.56■□□□□ 0.24
COL9A1-208ENST00000489611 ATAD5Q96QE3 1844 aa16.56■□□□□ 0.24
COL9A1-208ENST00000489611 CTAGE15A4D2H0 777 aa16.55■□□□□ 0.24
COL9A1-208ENST00000489611 KRT18P05783 430 aaKnown RBP16.55■□□□□ 0.24
COL9A1-208ENST00000489611 CTAGE8P0CG41 777 aa16.55■□□□□ 0.24
COL9A1-208ENST00000489611 CYP11B2P19099 503 aa16.55■□□□□ 0.24
COL9A1-208ENST00000489611 SLC12A3P55017 1021 aa16.55■□□□□ 0.24
COL9A1-208ENST00000489611 KIF5AQ12840 1032 aa16.55■□□□□ 0.24
COL9A1-208ENST00000489611 PRR16Q569H4 304 aa16.55■□□□□ 0.24
COL9A1-208ENST00000489611 CTAGE6Q86UF2 777 aa16.55■□□□□ 0.24
COL9A1-208ENST00000489611 CTAGE4Q8IX94 777 aa16.55■□□□□ 0.24
COL9A1-208ENST00000489611 ZC3H3Q8IXZ2 948 aaKnown RBP16.55■□□□□ 0.24
COL9A1-208ENST00000489611 SYT2Q8N9I0 419 aaPredicted RBP16.55■□□□□ 0.24
COL9A1-208ENST00000489611 MTMR14Q8NCE2 650 aa16.55■□□□□ 0.24
COL9A1-208ENST00000489611 HNRNPLLQ8WVV9 542 aaKnown RBP16.55■□□□□ 0.24
COL9A1-208ENST00000489611 HPS3Q969F9 1004 aa16.55■□□□□ 0.24
COL9A1-208ENST00000489611 JAKMIP2Q96AA8 810 aa16.55■□□□□ 0.24
COL9A1-208ENST00000489611 ARFGAP3Q9NP61 516 aa16.55■□□□□ 0.24
COL9A1-208ENST00000489611 ZNF70Q9UC06 446 aaPredicted RBP16.55■□□□□ 0.24
COL9A1-208ENST00000489611 PRR12Q9ULL5 1215 aa16.55■□□□□ 0.24
COL9A1-208ENST00000489611 RABGAP1Q9Y3P9 1069 aa16.55■□□□□ 0.24
COL9A1-208ENST00000489611 PCDHA2Q9Y5H9 948 aa16.55■□□□□ 0.24
COL9A1-208ENST00000489611 TRAF5O00463 557 aa16.55■□□□□ 0.24
COL9A1-208ENST00000489611 LCA5LO95447 670 aa16.55■□□□□ 0.24
COL9A1-208ENST00000489611 EGFRP00533 1210 aa16.55■□□□□ 0.24
COL9A1-208ENST00000489611 SSBP05455 408 aaKnown RBP eCLIP16.55■□□□□ 0.24
COL9A1-208ENST00000489611 YBX3P16989 372 aaKnown RBP eCLIP16.55■□□□□ 0.24
COL9A1-208ENST00000489611 GMPSP49915 693 aaPredicted RBP16.55■□□□□ 0.24
COL9A1-208ENST00000489611 VAV2P52735 878 aa16.55■□□□□ 0.24
COL9A1-208ENST00000489611 HERC4Q5GLZ8 1057 aaPredicted RBP16.55■□□□□ 0.24
COL9A1-208ENST00000489611 FAM160B2Q86V87 743 aa16.55■□□□□ 0.24
COL9A1-208ENST00000489611 NEK11Q8NG66 645 aa16.55■□□□□ 0.24
COL9A1-208ENST00000489611 ZNF446Q9NWS9 450 aa16.55■□□□□ 0.24
COL9A1-208ENST00000489611 GUCA1BQ9UMX6 200 aa16.55■□□□□ 0.24
COL9A1-208ENST00000489611 POTEB3A0JP26 581 aa16.54■□□□□ 0.24
COL9A1-208ENST00000489611 POTECB2RU33 542 aa16.54■□□□□ 0.24
COL9A1-208ENST00000489611 E9PMD0 336 aa16.54■□□□□ 0.24
COL9A1-208ENST00000489611 ERLIN1O75477 346 aa16.54■□□□□ 0.24
COL9A1-208ENST00000489611 HERVK_113P62684 666 aa16.54■□□□□ 0.24
COL9A1-208ENST00000489611 NBPF9Q3BBW0 867 aa16.54■□□□□ 0.24
COL9A1-208ENST00000489611 CCDC40Q4G0X9 1142 aa16.54■□□□□ 0.24
COL9A1-208ENST00000489611 POTEBQ6S5H4 581 aa16.54■□□□□ 0.24
COL9A1-208ENST00000489611 FAM83AQ86UY5 434 aa16.54■□□□□ 0.24
COL9A1-208ENST00000489611 CATSPER3Q86XQ3 398 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms