RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 STXBP2Q15833 593 aa24.29■■□□□ 1.48
SMC4-221ENST00000489573 L1TD1Q5T7N2 865 aaKnown RBP24.29■■□□□ 1.48
SMC4-221ENST00000489573 NT5DC1Q5TFE4 455 aa24.29■■□□□ 1.48
SMC4-221ENST00000489573 IFNL1Q8IU54 200 aa24.29■■□□□ 1.48
SMC4-221ENST00000489573 STAMQ92783 540 aa24.29■■□□□ 1.48
SMC4-221ENST00000489573 KBTBD4Q9NVX7 518 aa24.29■■□□□ 1.48
SMC4-221ENST00000489573 PKD2L1Q9P0L9 805 aa24.29■■□□□ 1.48
SMC4-221ENST00000489573 ADGRA2Q96PE1 1338 aa24.29■■□□□ 1.48
SMC4-221ENST00000489573 B4DLN1 442 aa24.29■■□□□ 1.48
SMC4-221ENST00000489573 EML1O00423 815 aa24.29■■□□□ 1.48
SMC4-221ENST00000489573 BIN1O00499 593 aa24.29■■□□□ 1.48
SMC4-221ENST00000489573 EDNRBP24530 442 aa24.29■■□□□ 1.48
SMC4-221ENST00000489573 SARSP49591 514 aaKnown RBP24.29■■□□□ 1.48
SMC4-221ENST00000489573 NLRP12P59046 1061 aa24.29■■□□□ 1.48
SMC4-221ENST00000489573 DPYDQ12882 1025 aa24.29■■□□□ 1.48
SMC4-221ENST00000489573 TAF1CQ15572 869 aaPredicted RBP24.29■■□□□ 1.48
SMC4-221ENST00000489573 GNPTABQ3T906 1256 aa24.29■■□□□ 1.48
SMC4-221ENST00000489573 B3GNT9Q6UX72 402 aa24.29■■□□□ 1.48
SMC4-221ENST00000489573 SPATA20Q8TB22 786 aa24.29■■□□□ 1.48
SMC4-221ENST00000489573 CDHR1Q96JP9 859 aa24.29■■□□□ 1.48
SMC4-221ENST00000489573 UNC45AQ9H3U1 944 aa24.29■■□□□ 1.48
SMC4-221ENST00000489573 TBC1D22BQ9NU19 505 aa24.29■■□□□ 1.48
SMC4-221ENST00000489573 CHMP2AO43633 222 aa24.28■■□□□ 1.48
SMC4-221ENST00000489573 MED24O75448 989 aa24.28■■□□□ 1.48
SMC4-221ENST00000489573 CAVIN2O95810 425 aa24.28■■□□□ 1.48
SMC4-221ENST00000489573 MYL1P05976 194 aa24.28■■□□□ 1.48
SMC4-221ENST00000489573 PGK2P07205 417 aa24.28■■□□□ 1.48
SMC4-221ENST00000489573 RPA1P27694 616 aa24.28■■□□□ 1.48
SMC4-221ENST00000489573 ITGB3BPQ13352 177 aaPredicted RBP24.28■■□□□ 1.48
SMC4-221ENST00000489573 ECM1Q16610 540 aa24.28■■□□□ 1.48
SMC4-221ENST00000489573 RNF214Q8ND24 703 aa24.28■■□□□ 1.48
SMC4-221ENST00000489573 MPHOSPH6Q99547 160 aaKnown RBP24.28■■□□□ 1.48
SMC4-221ENST00000489573 DNAJC25Q9H1X3 360 aa24.28■■□□□ 1.48
SMC4-221ENST00000489573 BLOC1S4Q9NUP1 217 aa24.28■■□□□ 1.48
SMC4-221ENST00000489573 A0A087WWV3 80 aa24.27■■□□□ 1.48
SMC4-221ENST00000489573 POTEB3A0JP26 581 aa24.27■■□□□ 1.48
SMC4-221ENST00000489573 DHX15O43143 795 aaKnown RBP24.27■■□□□ 1.48
SMC4-221ENST00000489573 EIF3JO75822 258 aaKnown RBP24.27■■□□□ 1.48
SMC4-221ENST00000489573 PDE4DQ08499 809 aa24.27■■□□□ 1.48
SMC4-221ENST00000489573 POTEBQ6S5H4 581 aa24.27■■□□□ 1.48
SMC4-221ENST00000489573 LARP4BQ92615 738 aaKnown RBP24.27■■□□□ 1.48
SMC4-221ENST00000489573 RAD54LQ92698 747 aa24.27■■□□□ 1.48
SMC4-221ENST00000489573 EIF2AK1Q9BQI3 630 aaKnown RBP24.27■■□□□ 1.48
SMC4-221ENST00000489573 POLR3CQ9BUI4 534 aaPredicted RBP24.27■■□□□ 1.48
SMC4-221ENST00000489573 MAN1B1Q9UKM7 699 aa24.27■■□□□ 1.48
SMC4-221ENST00000489573 DDX39AO00148 427 aaKnown RBP24.26■■□□□ 1.47
SMC4-221ENST00000489573 RGS20O76081 388 aa24.26■■□□□ 1.47
SMC4-221ENST00000489573 CASP1P29466 404 aa24.26■■□□□ 1.47
SMC4-221ENST00000489573 SEMA3FQ13275 785 aa24.26■■□□□ 1.47
SMC4-221ENST00000489573 PAXIP1Q6ZW49 1069 aaPredicted RBP24.26■■□□□ 1.47
SMC4-221ENST00000489573 CATSPER3Q86XQ3 398 aa24.26■■□□□ 1.47
SMC4-221ENST00000489573 ABRAQ8N0Z2 381 aa24.26■■□□□ 1.47
SMC4-221ENST00000489573 TRIML1Q8N9V2 468 aa24.26■■□□□ 1.47
SMC4-221ENST00000489573 FAM200AQ8TCP9 573 aa24.26■■□□□ 1.47
SMC4-221ENST00000489573 FGD4Q96M96 766 aa24.26■■□□□ 1.47
SMC4-221ENST00000489573 BLZF1Q9H2G9 400 aa24.26■■□□□ 1.47
SMC4-221ENST00000489573 IVNS1ABPQ9Y6Y0 642 aa24.26■■□□□ 1.47
SMC4-221ENST00000489573 SPATA31C1P0DKV0 1188 aa24.25■■□□□ 1.47
SMC4-221ENST00000489573 AMPD3Q01432 767 aa24.25■■□□□ 1.47
SMC4-221ENST00000489573 CUL4BQ13620 913 aa24.25■■□□□ 1.47
SMC4-221ENST00000489573 EPHA7Q15375 998 aa24.25■■□□□ 1.47
SMC4-221ENST00000489573 C11orf57Q6ZUT1 292 aaPredicted RBP24.25■■□□□ 1.47
SMC4-221ENST00000489573 SV2BQ7L1I2 683 aa24.25■■□□□ 1.47
SMC4-221ENST00000489573 KCNK18Q7Z418 384 aa24.25■■□□□ 1.47
SMC4-221ENST00000489573 GSDMAQ96QA5 445 aa24.25■■□□□ 1.47
SMC4-221ENST00000489573 CPA4Q9UI42 421 aa24.25■■□□□ 1.47
SMC4-221ENST00000489573 KIAA1024Q9UPX6 916 aa24.25■■□□□ 1.47
SMC4-221ENST00000489573 LOC102724159A0A0B4J2E5 919 aa24.25■■□□□ 1.47
SMC4-221ENST00000489573 STRNO43815 780 aa24.25■■□□□ 1.47
SMC4-221ENST00000489573 MAPK4P31152 587 aa24.25■■□□□ 1.47
SMC4-221ENST00000489573 HTRA3P83110 453 aa24.25■■□□□ 1.47
SMC4-221ENST00000489573 MCM6Q14566 821 aa24.25■■□□□ 1.47
SMC4-221ENST00000489573 PWP2Q15269 919 aaKnown RBP24.25■■□□□ 1.47
SMC4-221ENST00000489573 DPCR1Q3MIW9 517 aa24.25■■□□□ 1.47
SMC4-221ENST00000489573 TUFT1Q9NNX1 390 aa24.25■■□□□ 1.47
SMC4-221ENST00000489573 TCEAL9Q9UHQ7 104 aa24.25■■□□□ 1.47
SMC4-221ENST00000489573 POTEFA5A3E0 1075 aa24.24■■□□□ 1.47
SMC4-221ENST00000489573 SPATA31C2B4DYI2 1134 aa24.24■■□□□ 1.47
SMC4-221ENST00000489573 ATP9AO75110 1047 aa24.24■■□□□ 1.47
SMC4-221ENST00000489573 ICAM3P32942 547 aa24.24■■□□□ 1.47
SMC4-221ENST00000489573 CYP4A11Q02928 519 aa24.24■■□□□ 1.47
SMC4-221ENST00000489573 MORC3Q14149 939 aa24.24■■□□□ 1.47
SMC4-221ENST00000489573 ISM2Q6H9L7 571 aa24.24■■□□□ 1.47
SMC4-221ENST00000489573 POTEGQ6S5H5 508 aa24.24■■□□□ 1.47
SMC4-221ENST00000489573 MIER3Q7Z3K6 550 aa24.24■■□□□ 1.47
SMC4-221ENST00000489573 KCTD17Q8N5Z5 321 aa24.24■■□□□ 1.47
SMC4-221ENST00000489573 NEK9Q8TD19 979 aa24.24■■□□□ 1.47
SMC4-221ENST00000489573 HSD17B14Q9BPX1 270 aa24.24■■□□□ 1.47
SMC4-221ENST00000489573 LRRC37A2A6NM11 1700 aa24.23■■□□□ 1.47
SMC4-221ENST00000489573 KCNA2P16389 499 aa24.23■■□□□ 1.47
SMC4-221ENST00000489573 ADORA2AP29274 412 aa24.23■■□□□ 1.47
SMC4-221ENST00000489573 ZNF165P49910 485 aa24.23■■□□□ 1.47
SMC4-221ENST00000489573 APLP1P51693 650 aa24.23■■□□□ 1.47
SMC4-221ENST00000489573 KRT76Q01546 638 aa24.23■■□□□ 1.47
SMC4-221ENST00000489573 GPR142Q7Z601 462 aa24.23■■□□□ 1.47
SMC4-221ENST00000489573 DYDC2Q96IM9 177 aa24.23■■□□□ 1.47
SMC4-221ENST00000489573 C7orf25Q9BPX7 421 aa24.23■■□□□ 1.47
SMC4-221ENST00000489573 LRRC27Q9C0I9 530 aa24.23■■□□□ 1.47
SMC4-221ENST00000489573 NAT10Q9H0A0 1025 aaKnown RBP24.23■■□□□ 1.47
SMC4-221ENST00000489573 PLXNB2O15031 1838 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms