RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 CYP2D6P10635 497 aa9.08□□□□□ -0.96
SMC6-209ENST00000489535 CRKP46108 304 aa9.08□□□□□ -0.96
SMC6-209ENST00000489535 ST3GAL1Q11201 340 aa9.08□□□□□ -0.96
SMC6-209ENST00000489535 SBK1Q52WX2 424 aa9.08□□□□□ -0.96
SMC6-209ENST00000489535 HHIPL2Q6UWX4 724 aa9.08□□□□□ -0.96
SMC6-209ENST00000489535 KIAA0825Q8IV33 1275 aa9.08□□□□□ -0.96
SMC6-209ENST00000489535 MAPKAPK5Q8IW41 473 aa9.08□□□□□ -0.96
SMC6-209ENST00000489535 AMOTL1Q8IY63 956 aa9.08□□□□□ -0.96
SMC6-209ENST00000489535 NIM1KQ8IY84 436 aa9.08□□□□□ -0.96
SMC6-209ENST00000489535 NECAB1Q8N987 351 aa9.08□□□□□ -0.96
SMC6-209ENST00000489535 NLGN2Q8NFZ4 835 aa9.08□□□□□ -0.96
SMC6-209ENST00000489535 FBLIM1Q8WUP2 373 aa9.08□□□□□ -0.96
SMC6-209ENST00000489535 TEKT1Q969V4 418 aa9.08□□□□□ -0.96
SMC6-209ENST00000489535 AGXT2Q9BYV1 514 aa9.08□□□□□ -0.96
SMC6-209ENST00000489535 TAOK3Q9H2K8 898 aa9.08□□□□□ -0.96
SMC6-209ENST00000489535 PRKAG2Q9UGJ0 569 aa9.08□□□□□ -0.96
SMC6-209ENST00000489535 FNDC3AQ9Y2H6 1198 aaKnown RBP9.08□□□□□ -0.96
SMC6-209ENST00000489535 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.08□□□□□ -0.96
SMC6-209ENST00000489535 FAM170BA6NMN3 283 aa9.07□□□□□ -0.96
SMC6-209ENST00000489535 SMIM22K7EJ46 135 aa9.07□□□□□ -0.96
SMC6-209ENST00000489535 SLC3A2P08195 630 aaKnown RBP9.07□□□□□ -0.96
SMC6-209ENST00000489535 ACPPP15309 386 aa9.07□□□□□ -0.96
SMC6-209ENST00000489535 RHBDL3P58872 404 aa9.07□□□□□ -0.96
SMC6-209ENST00000489535 C19orf57Q0VDD7 668 aa9.07□□□□□ -0.96
SMC6-209ENST00000489535 SLC4A8Q2Y0W8 1093 aa9.07□□□□□ -0.96
SMC6-209ENST00000489535 C16orf46Q6P387 395 aa9.07□□□□□ -0.96
SMC6-209ENST00000489535 GTF3C6Q969F1 213 aa9.07□□□□□ -0.96
SMC6-209ENST00000489535 ZC3H7BQ9UGR2 993 aaKnown RBP9.07□□□□□ -0.96
SMC6-209ENST00000489535 SAP30BPQ9UHR5 308 aaKnown RBP9.07□□□□□ -0.96
SMC6-209ENST00000489535 NAP1L2Q9ULW6 460 aaPredicted RBP9.07□□□□□ -0.96
SMC6-209ENST00000489535 SOX13Q9UN79 622 aa9.07□□□□□ -0.96
SMC6-209ENST00000489535 SMC3Q9UQE7 1217 aa9.07□□□□□ -0.96
SMC6-209ENST00000489535 ROBO3Q96MS0 1386 aa9.07□□□□□ -0.96
SMC6-209ENST00000489535 FLT1P17948 1338 aa9.06□□□□□ -0.96
SMC6-209ENST00000489535 MYO3BQ8WXR4 1341 aa9.06□□□□□ -0.96
SMC6-209ENST00000489535 KLF18A0A0U1RQI7 1052 aa9.06□□□□□ -0.96
SMC6-209ENST00000489535 PSMD14O00487 310 aa9.06□□□□□ -0.96
SMC6-209ENST00000489535 SH2B2O14492 632 aaPredicted RBP9.06□□□□□ -0.96
SMC6-209ENST00000489535 IFIT3O14879 490 aaKnown RBP9.06□□□□□ -0.96
SMC6-209ENST00000489535 PFKFB2O60825 505 aa9.06□□□□□ -0.96
SMC6-209ENST00000489535 RAD17O75943 681 aa9.06□□□□□ -0.96
SMC6-209ENST00000489535 POLR3DP05423 398 aaPredicted RBP9.06□□□□□ -0.96
SMC6-209ENST00000489535 PCP11498 1178 aaKnown RBP9.06□□□□□ -0.96
SMC6-209ENST00000489535 RBM5P52756 815 aaKnown RBP eCLIP9.06□□□□□ -0.96
SMC6-209ENST00000489535 NUCB2P80303 420 aa9.06□□□□□ -0.96
SMC6-209ENST00000489535 HDLBPQ00341 1268 aaKnown RBP9.06□□□□□ -0.96
SMC6-209ENST00000489535 PDE4BQ07343 736 aa9.06□□□□□ -0.96
SMC6-209ENST00000489535 PICALMQ13492 652 aa9.06□□□□□ -0.96
SMC6-209ENST00000489535 RAB3GAP1Q15042 981 aa9.06□□□□□ -0.96
SMC6-209ENST00000489535 WFDC3Q8IUB2 231 aa9.06□□□□□ -0.96
SMC6-209ENST00000489535 FBXL16Q8N461 479 aa9.06□□□□□ -0.96
SMC6-209ENST00000489535 ESR2Q92731 530 aa9.06□□□□□ -0.96
SMC6-209ENST00000489535 TMEM87BQ96K49 555 aa9.06□□□□□ -0.96
SMC6-209ENST00000489535 ZKSCAN3Q9BRR0 538 aa9.06□□□□□ -0.96
SMC6-209ENST00000489535 CYP4F12Q9HCS2 524 aa9.06□□□□□ -0.96
SMC6-209ENST00000489535 USP40Q9NVE5 1235 aa9.06□□□□□ -0.96
SMC6-209ENST00000489535 ZSWIM5Q9P217 1185 aa9.06□□□□□ -0.96
SMC6-209ENST00000489535 KANSL3Q9P2N6 904 aa9.06□□□□□ -0.96
SMC6-209ENST00000489535 ZNRF3Q9ULT6 936 aa9.06□□□□□ -0.96
SMC6-209ENST00000489535 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.06□□□□□ -0.96
SMC6-209ENST00000489535 LTBP3Q9NS15 1303 aa9.05□□□□□ -0.96
SMC6-209ENST00000489535 DOCK1Q14185 1865 aa9.05□□□□□ -0.96
SMC6-209ENST00000489535 ERICH2A1L162 156 aa9.05□□□□□ -0.96
SMC6-209ENST00000489535 ORC4O43929 436 aa9.05□□□□□ -0.96
SMC6-209ENST00000489535 RANBP6O60518 1105 aaKnown RBP9.05□□□□□ -0.96
SMC6-209ENST00000489535 DTNBO60941 627 aa9.05□□□□□ -0.96
SMC6-209ENST00000489535 PRDM1O75626 825 aa9.05□□□□□ -0.96
SMC6-209ENST00000489535 DLGAP3O95886 979 aa9.05□□□□□ -0.96
SMC6-209ENST00000489535 VIL1P09327 827 aaKnown RBP9.05□□□□□ -0.96
SMC6-209ENST00000489535 FGRP09769 529 aa9.05□□□□□ -0.96
SMC6-209ENST00000489535 GJB2P29033 226 aa9.05□□□□□ -0.96
SMC6-209ENST00000489535 CCT2P78371 535 aaKnown RBP9.05□□□□□ -0.96
SMC6-209ENST00000489535 SCRN1Q12765 414 aa9.05□□□□□ -0.96
SMC6-209ENST00000489535 WTAPQ15007 396 aa9.05□□□□□ -0.96
SMC6-209ENST00000489535 SART3Q15020 963 aaKnown RBP9.05□□□□□ -0.96
SMC6-209ENST00000489535 TMEM67Q5HYA8 995 aa9.05□□□□□ -0.96
SMC6-209ENST00000489535 LCE5AQ5TCM9 118 aa9.05□□□□□ -0.96
SMC6-209ENST00000489535 C12orf60Q5U649 245 aa9.05□□□□□ -0.96
SMC6-209ENST00000489535 CDC42EP5Q6NZY7 148 aa9.05□□□□□ -0.96
SMC6-209ENST00000489535 JDP2Q8WYK2 163 aa9.05□□□□□ -0.96
SMC6-209ENST00000489535 EZH1Q92800 747 aaPredicted RBP9.05□□□□□ -0.96
SMC6-209ENST00000489535 ZNF274Q96GC6 653 aaPredicted RBP9.05□□□□□ -0.96
SMC6-209ENST00000489535 ZDHHC15Q96MV8 337 aa9.05□□□□□ -0.96
SMC6-209ENST00000489535 MRIQ9BWK5 157 aa9.05□□□□□ -0.96
SMC6-209ENST00000489535 LY9Q9HBG7 655 aa9.05□□□□□ -0.96
SMC6-209ENST00000489535 SALL4Q9UJQ4 1053 aa9.05□□□□□ -0.96
SMC6-209ENST00000489535 SERPINA10Q9UK55 444 aa9.05□□□□□ -0.96
SMC6-209ENST00000489535 BRPF3Q9ULD4 1205 aa9.05□□□□□ -0.96
SMC6-209ENST00000489535 PCDHAC2Q9Y5I4 1007 aa9.05□□□□□ -0.96
SMC6-209ENST00000489535 LOC100289279A0A1B0GTE1 492 aa9.04□□□□□ -0.96
SMC6-209ENST00000489535 CCDC69A6NI79 296 aa9.04□□□□□ -0.96
SMC6-209ENST00000489535 GOLGA8BA8MQT2 603 aa9.04□□□□□ -0.96
SMC6-209ENST00000489535 FARP2O94887 1054 aaPredicted RBP9.04□□□□□ -0.96
SMC6-209ENST00000489535 DRD2P14416 443 aa9.04□□□□□ -0.96
SMC6-209ENST00000489535 PDIA3P30101 505 aaKnown RBP9.04□□□□□ -0.96
SMC6-209ENST00000489535 ARL4DP49703 201 aa9.04□□□□□ -0.96
SMC6-209ENST00000489535 EVCP57679 992 aa9.04□□□□□ -0.96
SMC6-209ENST00000489535 PKP1Q13835 747 aa9.04□□□□□ -0.96
SMC6-209ENST00000489535 CFAP100Q494V2 611 aa9.04□□□□□ -0.96
SMC6-209ENST00000489535 APOBEC3HQ6NTF7 200 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms